RNA–Protein interactions for RNA: ENST00000580048.1

LINC00909-202, long intergenic non-protein coding RNA 909, humanhuman

TSL 1 (best) BASIC

Gene LINC00909, Length 3,463 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00909-202ENST00000580048 PTPRKQ15262 1439 aa13.5□□□□□ -0.25
LINC00909-202ENST00000580048 MAP3K1Q13233 1512 aa13.5□□□□□ -0.25
LINC00909-202ENST00000580048 NBPF8Q3BBV2 869 aa13.5□□□□□ -0.25
LINC00909-202ENST00000580048 HFM1A2PYH4 1435 aa13.49□□□□□ -0.25
LINC00909-202ENST00000580048 FGD6Q6ZV73 1430 aa13.49□□□□□ -0.25
LINC00909-202ENST00000580048 FMN1Q68DA7 1419 aa13.49□□□□□ -0.25
LINC00909-202ENST00000580048 KDM5BQ9UGL1 1544 aa13.49□□□□□ -0.25
LINC00909-202ENST00000580048 PNISRQ8TF01 805 aaKnown RBP13.48□□□□□ -0.25
LINC00909-202ENST00000580048 MTUS2Q5JR59 1369 aa13.48□□□□□ -0.25
LINC00909-202ENST00000580048 FHOD3Q2V2M9 1422 aa13.47□□□□□ -0.25
LINC00909-202ENST00000580048 RRAGDQ9NQL2 400 aaPredicted RBP13.47□□□□□ -0.25
LINC00909-202ENST00000580048 NAIPQ13075 1403 aa13.47□□□□□ -0.25
LINC00909-202ENST00000580048 MPHOSPH9Q99550 1183 aa13.45□□□□□ -0.26
LINC00909-202ENST00000580048 HSP90AA2PQ14568 343 aaPredicted RBP13.45□□□□□ -0.26
LINC00909-202ENST00000580048 CRBNQ96SW2 442 aa13.45□□□□□ -0.26
LINC00909-202ENST00000580048 POGKQ9P215 609 aa13.45□□□□□ -0.26
LINC00909-202ENST00000580048 CARMIL1Q5VZK9 1371 aa13.45□□□□□ -0.26
LINC00909-202ENST00000580048 RGS3P49796 1198 aa13.44□□□□□ -0.26
LINC00909-202ENST00000580048 ATAD2BQ9ULI0 1458 aa13.43□□□□□ -0.26
LINC00909-202ENST00000580048 CDCA7LQ96GN5 454 aa13.43□□□□□ -0.26
LINC00909-202ENST00000580048 IGF1RP08069 1367 aa13.43□□□□□ -0.26
LINC00909-202ENST00000580048 PCF11O94913 1555 aaKnown RBP13.43□□□□□ -0.26
LINC00909-202ENST00000580048 PTPN23Q9H3S7 1636 aa13.43□□□□□ -0.26
LINC00909-202ENST00000580048 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.43□□□□□ -0.26
LINC00909-202ENST00000580048 ARID4BQ4LE39 1312 aaPredicted RBP13.42□□□□□ -0.26
LINC00909-202ENST00000580048 PNNQ9H307 717 aaKnown RBP13.42□□□□□ -0.26
LINC00909-202ENST00000580048 CUX1P39880 1505 aa13.42□□□□□ -0.26
LINC00909-202ENST00000580048 BIVM-ERCC5R4GMW8 1640 aa13.42□□□□□ -0.26
LINC00909-202ENST00000580048 HSP90AA1P07900 732 aaKnown RBP13.41□□□□□ -0.26
LINC00909-202ENST00000580048 SLKQ9H2G2 1235 aaPredicted RBP13.4□□□□□ -0.26
LINC00909-202ENST00000580048 DHX29Q7Z478 1369 aaKnown RBP13.39□□□□□ -0.27
LINC00909-202ENST00000580048 FAM161AQ3B820 660 aa13.38□□□□□ -0.27
LINC00909-202ENST00000580048 L1TD1Q5T7N2 865 aaKnown RBP13.36□□□□□ -0.27
LINC00909-202ENST00000580048 C20orf194Q5TEA3 1177 aa13.36□□□□□ -0.27
LINC00909-202ENST00000580048 GZF1Q9H116 711 aaPredicted RBP13.36□□□□□ -0.27
LINC00909-202ENST00000580048 SLC4A1APQ9BWU0 796 aaKnown RBP13.35□□□□□ -0.27
LINC00909-202ENST00000580048 PODXL2Q9NZ53 605 aa13.34□□□□□ -0.27
LINC00909-202ENST00000580048 CFAP43Q8NDM7 1665 aa13.34□□□□□ -0.27
LINC00909-202ENST00000580048 C8orf34Q49A92 452 aa13.33□□□□□ -0.27
LINC00909-202ENST00000580048 PLEKHG5O94827 1062 aa13.33□□□□□ -0.28
LINC00909-202ENST00000580048 USP47Q96K76 1375 aa13.32□□□□□ -0.28
LINC00909-202ENST00000580048 ARID3CA6NKF2 412 aa13.32□□□□□ -0.28
LINC00909-202ENST00000580048 RRP9O43818 475 aaKnown RBP13.32□□□□□ -0.28
LINC00909-202ENST00000580048 CASKIN1Q8WXD9 1431 aa13.31□□□□□ -0.28
LINC00909-202ENST00000580048 MYBBP1AQ9BQG0 1328 aaKnown RBP13.31□□□□□ -0.28
LINC00909-202ENST00000580048 KTN1Q86UP2 1357 aaKnown RBP13.31□□□□□ -0.28
LINC00909-202ENST00000580048 FYCO1Q9BQS8 1478 aa13.31□□□□□ -0.28
LINC00909-202ENST00000580048 PDE3BQ13370 1112 aa13.31□□□□□ -0.28
LINC00909-202ENST00000580048 SPATA31E1Q6ZUB1 1445 aa13.31□□□□□ -0.28
LINC00909-202ENST00000580048 MYOM3Q5VTT5 1437 aa13.3□□□□□ -0.28
LINC00909-202ENST00000580048 CENPQQ7L2Z9 268 aaPredicted RBP13.3□□□□□ -0.28
LINC00909-202ENST00000580048 PANK2Q9BZ23 570 aa13.3□□□□□ -0.28
LINC00909-202ENST00000580048 DENND4BO75064 1496 aaPredicted RBP13.3□□□□□ -0.28
LINC00909-202ENST00000580048 GOLGA6L3A6NEY3 463 aa13.29□□□□□ -0.28
LINC00909-202ENST00000580048 SPRYD3Q8NCJ5 442 aa13.29□□□□□ -0.28
LINC00909-202ENST00000580048 KIF15Q9NS87 1388 aa13.28□□□□□ -0.28
LINC00909-202ENST00000580048 UNC13AQ9UPW8 1703 aa13.28□□□□□ -0.28
LINC00909-202ENST00000580048 XRCC6P12956 609 aaKnown RBP eCLIP13.27□□□□□ -0.28
LINC00909-202ENST00000580048 BECN1Q14457 450 aa13.27□□□□□ -0.28
LINC00909-202ENST00000580048 BRD4O60885 1362 aaPredicted RBP13.27□□□□□ -0.29
LINC00909-202ENST00000580048 LRPPRCP42704 1394 aaKnown RBP13.27□□□□□ -0.29
LINC00909-202ENST00000580048 CFTRP13569 1480 aa13.27□□□□□ -0.29
LINC00909-202ENST00000580048 RALBP1Q15311 655 aa13.26□□□□□ -0.29
LINC00909-202ENST00000580048 CARD11Q9BXL7 1154 aa13.26□□□□□ -0.29
LINC00909-202ENST00000580048 FGD5Q6ZNL6 1462 aa13.25□□□□□ -0.29
LINC00909-202ENST00000580048 KDM2AQ9Y2K7 1162 aa13.25□□□□□ -0.29
LINC00909-202ENST00000580048 NLRP13Q86W25 1043 aa13.25□□□□□ -0.29
LINC00909-202ENST00000580048 CLCN1P35523 988 aa13.25□□□□□ -0.29
LINC00909-202ENST00000580048 ANKRD30BQ9BXX2 1392 aa13.24□□□□□ -0.29
LINC00909-202ENST00000580048 KDM2BQ8NHM5 1336 aa13.24□□□□□ -0.29
LINC00909-202ENST00000580048 CC2D1BQ5T0F9 858 aaKnown RBP13.24□□□□□ -0.29
LINC00909-202ENST00000580048 RPRD2Q5VT52 1461 aaKnown RBP13.23□□□□□ -0.29
LINC00909-202ENST00000580048 ST20-MTHFSA0A0A6YYL1 179 aa13.23□□□□□ -0.29
LINC00909-202ENST00000580048 MIA2Q96PC5 1412 aa13.22□□□□□ -0.29
LINC00909-202ENST00000580048 KDM6BO15054 1643 aa13.22□□□□□ -0.29
LINC00909-202ENST00000580048 A0A0U1RQG5 324 aaPredicted RBP13.22□□□□□ -0.29
LINC00909-202ENST00000580048 TEX14Q8IWB6 1497 aa13.21□□□□□ -0.3
LINC00909-202ENST00000580048 ROCK2O75116 1388 aaKnown RBP13.2□□□□□ -0.3
LINC00909-202ENST00000580048 SEC24BO95487 1268 aa13.2□□□□□ -0.3
LINC00909-202ENST00000580048 TRIM44Q96DX7 344 aaPredicted RBP13.19□□□□□ -0.3
LINC00909-202ENST00000580048 ABCA5Q8WWZ7 1642 aa13.19□□□□□ -0.3
LINC00909-202ENST00000580048 MYH16Q9H6N6 1097 aa13.19□□□□□ -0.3
LINC00909-202ENST00000580048 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.18□□□□□ -0.3
LINC00909-202ENST00000580048 HECW1Q76N89 1606 aa13.18□□□□□ -0.3
LINC00909-202ENST00000580048 BICRAQ9NZM4 1560 aa13.18□□□□□ -0.3
LINC00909-202ENST00000580048 ESPNB1AK53 854 aa13.17□□□□□ -0.3
LINC00909-202ENST00000580048 UPF2Q9HAU5 1272 aaKnown RBP13.16□□□□□ -0.3
LINC00909-202ENST00000580048 BCORL1Q5H9F3 1711 aa13.15□□□□□ -0.3
LINC00909-202ENST00000580048 ARID3AQ99856 593 aa13.15□□□□□ -0.3
LINC00909-202ENST00000580048 USP19O94966 1318 aa13.14□□□□□ -0.31
LINC00909-202ENST00000580048 TRAK2O60296 914 aa13.14□□□□□ -0.31
LINC00909-202ENST00000580048 MCM4P33991 863 aa13.14□□□□□ -0.31
LINC00909-202ENST00000580048 PKD2Q13563 968 aa13.14□□□□□ -0.31
LINC00909-202ENST00000580048 MRE11P49959 708 aa13.13□□□□□ -0.31
LINC00909-202ENST00000580048 ERBB4Q15303 1308 aa13.12□□□□□ -0.31
LINC00909-202ENST00000580048 RBM10P98175 930 aaKnown RBP13.12□□□□□ -0.31
LINC00909-202ENST00000580048 SNAPC4Q5SXM2 1469 aa13.12□□□□□ -0.31
LINC00909-202ENST00000580048 EFCAB5A4FU69 1503 aa13.12□□□□□ -0.31
LINC00909-202ENST00000580048 FSD2A1L4K1 749 aa13.12□□□□□ -0.31
LINC00909-202ENST00000580048 CANXP27824 592 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms