RNA–Protein interactions for RNA: ENST00000578861.5

SNX11-205, Transcript of sorting nexin 11, humanhuman

TSL 4

Gene SNX11, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-205ENST00000578861 SENP3Q9H4L4 574 aaPredicted RBP15.31■□□□□ 0.04
SNX11-205ENST00000578861 FHOD3Q2V2M9 1422 aa15.31■□□□□ 0.04
SNX11-205ENST00000578861 FER1L4A9Z1Z3 1794 aa15.3■□□□□ 0.04
SNX11-205ENST00000578861 NCKAP5LQ9HCH0 1330 aa15.28■□□□□ 0.04
SNX11-205ENST00000578861 ESF1Q9H501 851 aaKnown RBP15.28■□□□□ 0.04
SNX11-205ENST00000578861 SIGLEC1Q9BZZ2 1709 aa15.26■□□□□ 0.03
SNX11-205ENST00000578861 MYT1LQ9UL68 1186 aa15.26■□□□□ 0.03
SNX11-205ENST00000578861 EFCAB5A4FU69 1503 aa15.26■□□□□ 0.03
SNX11-205ENST00000578861 TOM1O60784 492 aa15.25■□□□□ 0.03
SNX11-205ENST00000578861 ARHGEF12Q9NZN5 1544 aa15.24■□□□□ 0.03
SNX11-205ENST00000578861 NCOA1Q15788 1441 aa15.23■□□□□ 0.03
SNX11-205ENST00000578861 MAGI2Q86UL8 1455 aa15.22■□□□□ 0.03
SNX11-205ENST00000578861 PLEKHD1A6NEE1 506 aa15.22■□□□□ 0.03
SNX11-205ENST00000578861 ATP10AO60312 1499 aa15.21■□□□□ 0.03
SNX11-205ENST00000578861 RICTORQ6R327 1708 aa15.21■□□□□ 0.03
SNX11-205ENST00000578861 C9orf84Q5VXU9 1444 aa15.19■□□□□ 0.02
SNX11-205ENST00000578861 ZMYM4Q5VZL5 1548 aa15.19■□□□□ 0.02
SNX11-205ENST00000578861 SCAPERQ9BY12 1400 aa15.18■□□□□ 0.02
SNX11-205ENST00000578861 TRAPPC8Q9Y2L5 1435 aa15.18■□□□□ 0.02
SNX11-205ENST00000578861 HECW1Q76N89 1606 aa15.17■□□□□ 0.02
SNX11-205ENST00000578861 RGS17Q9UGC6 210 aaPredicted RBP15.14■□□□□ 0.01
SNX11-205ENST00000578861 SETD1BQ9UPS6 1966 aaKnown RBP15.14■□□□□ 0.01
SNX11-205ENST00000578861 PKD2Q13563 968 aa15.13■□□□□ 0.01
SNX11-205ENST00000578861 PPP6R1Q9UPN7 881 aa15.13■□□□□ 0.01
SNX11-205ENST00000578861 CAMSAP1Q5T5Y3 1602 aa15.13■□□□□ 0.01
SNX11-205ENST00000578861 RANGAP1P46060 587 aaPredicted RBP15.1■□□□□ 0.01
SNX11-205ENST00000578861 CFAP74Q9C0B2 1584 aa15.1■□□□□ 0.01
SNX11-205ENST00000578861 CTTNBP2Q8WZ74 1663 aa15.09■□□□□ 0.01
SNX11-205ENST00000578861 AFAP1Q8N556 730 aa15.09■□□□□ 0.01
SNX11-205ENST00000578861 EFCAB2Q5VUJ9 269 aa15.06■□□□□ 0
SNX11-205ENST00000578861 POTEAQ6S8J7 498 aa15.06■□□□□ 0
SNX11-205ENST00000578861 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.06■□□□□ 0
SNX11-205ENST00000578861 C3P01024 1663 aa15.03■□□□□ -0
SNX11-205ENST00000578861 NUP153P49790 1475 aaKnown RBP15.03■□□□□ -0
SNX11-205ENST00000578861 RAPGEF6Q8TEU7 1601 aa15.03■□□□□ -0
SNX11-205ENST00000578861 PLCH2O75038 1416 aa15□□□□□ -0.01
SNX11-205ENST00000578861 PTPRKQ15262 1439 aa15□□□□□ -0.01
SNX11-205ENST00000578861 ZMYM3Q14202 1370 aa14.98□□□□□ -0.01
SNX11-205ENST00000578861 CNTLNQ9NXG0 1405 aa14.98□□□□□ -0.01
SNX11-205ENST00000578861 NPATQ14207 1427 aa14.97□□□□□ -0.01
SNX11-205ENST00000578861 PLA2R1Q13018 1463 aa14.95□□□□□ -0.02
SNX11-205ENST00000578861 ZNF518AQ6AHZ1 1483 aa14.95□□□□□ -0.02
SNX11-205ENST00000578861 TCOF1Q13428 1488 aaKnown RBP14.95□□□□□ -0.02
SNX11-205ENST00000578861 SHANK2Q9UPX8 1470 aa14.95□□□□□ -0.02
SNX11-205ENST00000578861 CPS1P31327 1500 aa14.94□□□□□ -0.02
SNX11-205ENST00000578861 ATP1B4Q9UN42 357 aaPredicted RBP14.94□□□□□ -0.02
SNX11-205ENST00000578861 PRXQ9BXM0 1461 aa14.93□□□□□ -0.02
SNX11-205ENST00000578861 UPF1Q92900 1129 aaKnown RBP eCLIP14.91□□□□□ -0.02
SNX11-205ENST00000578861 DIP2CQ9Y2E4 1556 aa14.9□□□□□ -0.02
SNX11-205ENST00000578861 AGLP35573 1532 aa14.89□□□□□ -0.03
SNX11-205ENST00000578861 ANKLE2Q86XL3 938 aa14.86□□□□□ -0.03
SNX11-205ENST00000578861 CEP170BQ9Y4F5 1589 aaPredicted RBP14.85□□□□□ -0.03
SNX11-205ENST00000578861 GGT6Q6P531 493 aa14.85□□□□□ -0.03
SNX11-205ENST00000578861 ALKQ9UM73 1620 aa14.84□□□□□ -0.03
SNX11-205ENST00000578861 ARHGAP5Q13017 1502 aa14.84□□□□□ -0.03
SNX11-205ENST00000578861 CSRNP3Q8WYN3 585 aa14.84□□□□□ -0.03
SNX11-205ENST00000578861 TRIM52Q96A61 297 aa14.84□□□□□ -0.03
SNX11-205ENST00000578861 REREQ9P2R6 1566 aa14.84□□□□□ -0.03
SNX11-205ENST00000578861 MLH3Q9UHC1 1453 aa14.83□□□□□ -0.03
SNX11-205ENST00000578861 CDK13Q14004 1512 aaKnown RBP14.83□□□□□ -0.04
SNX11-205ENST00000578861 KDM5CP41229 1560 aa14.83□□□□□ -0.04
SNX11-205ENST00000578861 ABCA6Q8N139 1617 aa14.83□□□□□ -0.04
SNX11-205ENST00000578861 SAMD9Q5K651 1589 aa14.82□□□□□ -0.04
SNX11-205ENST00000578861 SETD1AO15047 1707 aaKnown RBP14.81□□□□□ -0.04
SNX11-205ENST00000578861 CDK11AQ9UQ88 783 aaPredicted RBP14.81□□□□□ -0.04
SNX11-205ENST00000578861 MYO3AQ8NEV4 1616 aa14.81□□□□□ -0.04
SNX11-205ENST00000578861 SRCAPQ6ZRS2 3230 aa14.8□□□□□ -0.04
SNX11-205ENST00000578861 SUPT6HQ7KZ85 1726 aaKnown RBP14.8□□□□□ -0.04
SNX11-205ENST00000578861 A2ML1A8K2U0 1454 aa14.78□□□□□ -0.04
SNX11-205ENST00000578861 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.78□□□□□ -0.04
SNX11-205ENST00000578861 THEMISQ8N1K5 641 aaPredicted RBP14.76□□□□□ -0.05
SNX11-205ENST00000578861 ZNF142P52746 1687 aaPredicted RBP14.76□□□□□ -0.05
SNX11-205ENST00000578861 NPHP4O75161 1426 aaPredicted RBP14.75□□□□□ -0.05
SNX11-205ENST00000578861 FBXO31Q5XUX0 539 aaPredicted RBP14.75□□□□□ -0.05
SNX11-205ENST00000578861 VWDEQ8N2E2 1590 aa14.75□□□□□ -0.05
SNX11-205ENST00000578861 LRRC7Q96NW7 1537 aa14.75□□□□□ -0.05
SNX11-205ENST00000578861 ZNF777Q9ULD5 760 aaPredicted RBP14.74□□□□□ -0.05
SNX11-205ENST00000578861 MYO5CQ9NQX4 1742 aa14.74□□□□□ -0.05
SNX11-205ENST00000578861 MROH2AA6NES4 1674 aa14.74□□□□□ -0.05
SNX11-205ENST00000578861 SPAG9O60271 1321 aaKnown RBP14.73□□□□□ -0.05
SNX11-205ENST00000578861 DNMT1P26358 1616 aaKnown RBP14.73□□□□□ -0.05
SNX11-205ENST00000578861 NEURL4Q96JN8 1562 aa14.73□□□□□ -0.05
SNX11-205ENST00000578861 CLTCQ00610 1675 aaKnown RBP14.71□□□□□ -0.05
SNX11-205ENST00000578861 MEX3CQ5U5Q3 659 aaKnown RBP14.71□□□□□ -0.05
SNX11-205ENST00000578861 EEA1Q15075 1411 aa14.71□□□□□ -0.05
SNX11-205ENST00000578861 TNRQ92752 1358 aa14.71□□□□□ -0.06
SNX11-205ENST00000578861 KIF14Q15058 1648 aa14.68□□□□□ -0.06
SNX11-205ENST00000578861 CHIC1Q5VXU3 224 aa14.68□□□□□ -0.06
SNX11-205ENST00000578861 EHMT2Q96KQ7 1210 aa14.68□□□□□ -0.06
SNX11-205ENST00000578861 CLIP1P30622 1438 aa14.67□□□□□ -0.06
SNX11-205ENST00000578861 FAM135BQ49AJ0 1406 aa14.67□□□□□ -0.06
SNX11-205ENST00000578861 RNF17Q9BXT8 1623 aaKnown RBP14.67□□□□□ -0.06
SNX11-205ENST00000578861 RXRBP28702 533 aa14.67□□□□□ -0.06
SNX11-205ENST00000578861 HNRNPMP52272 730 aaKnown RBP eCLIP14.67□□□□□ -0.06
SNX11-205ENST00000578861 ZNF772Q68DY9 489 aaPredicted RBP14.67□□□□□ -0.06
SNX11-205ENST00000578861 TROQ12816 1431 aaPredicted RBP14.66□□□□□ -0.06
SNX11-205ENST00000578861 KIDINS220Q9ULH0 1771 aa14.65□□□□□ -0.06
SNX11-205ENST00000578861 ABCC1P33527 1531 aa14.65□□□□□ -0.06
SNX11-205ENST00000578861 POLR1AO95602 1720 aaPredicted RBP14.64□□□□□ -0.07
SNX11-205ENST00000578861 ZRANB1Q9UGI0 708 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms