RNA–Protein interactions for RNA: ENST00000578557.1

PPP4R1-210, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-210ENST00000578557 NEO1Q92859 1461 aa13.56□□□□□ -0.24
PPP4R1-210ENST00000578557 LOC105371045A0A1W2PR82 267 aa13.56□□□□□ -0.24
PPP4R1-210ENST00000578557 APLP2Q06481 763 aa13.56□□□□□ -0.24
PPP4R1-210ENST00000578557 TROQ12816 1431 aaPredicted RBP13.56□□□□□ -0.24
PPP4R1-210ENST00000578557 PLCH2O75038 1416 aa13.53□□□□□ -0.24
PPP4R1-210ENST00000578557 ARAP3Q8WWN8 1544 aa13.52□□□□□ -0.25
PPP4R1-210ENST00000578557 MAP3K4Q9Y6R4 1608 aa13.52□□□□□ -0.25
PPP4R1-210ENST00000578557 KIF13AQ9H1H9 1805 aa13.52□□□□□ -0.25
PPP4R1-210ENST00000578557 CFAP43Q8NDM7 1665 aa13.51□□□□□ -0.25
PPP4R1-210ENST00000578557 ABCA9Q8IUA7 1624 aa13.5□□□□□ -0.25
PPP4R1-210ENST00000578557 MTUS2Q5JR59 1369 aa13.48□□□□□ -0.25
PPP4R1-210ENST00000578557 VPS8Q8N3P4 1428 aa13.47□□□□□ -0.25
PPP4R1-210ENST00000578557 KDM6BO15054 1643 aa13.47□□□□□ -0.25
PPP4R1-210ENST00000578557 RSPH4AQ5TD94 716 aa13.47□□□□□ -0.25
PPP4R1-210ENST00000578557 AKNAQ7Z591 1439 aa13.47□□□□□ -0.25
PPP4R1-210ENST00000578557 FANCAO15360 1455 aa13.46□□□□□ -0.25
PPP4R1-210ENST00000578557 CDK13Q14004 1512 aaKnown RBP13.45□□□□□ -0.26
PPP4R1-210ENST00000578557 ATXN8OSP0DMR3 200 aa13.45□□□□□ -0.26
PPP4R1-210ENST00000578557 DENND4BO75064 1496 aaPredicted RBP13.44□□□□□ -0.26
PPP4R1-210ENST00000578557 SPINK5Q9NQ38 1064 aaPredicted RBP13.44□□□□□ -0.26
PPP4R1-210ENST00000578557 MAP3K1Q13233 1512 aa13.44□□□□□ -0.26
PPP4R1-210ENST00000578557 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.44□□□□□ -0.26
PPP4R1-210ENST00000578557 MAGI2Q86UL8 1455 aa13.43□□□□□ -0.26
PPP4R1-210ENST00000578557 COL17A1Q9UMD9 1497 aaPredicted RBP13.42□□□□□ -0.26
PPP4R1-210ENST00000578557 CFDP1Q9UEE9 299 aaPredicted RBP13.42□□□□□ -0.26
PPP4R1-210ENST00000578557 CCNB3Q8WWL7 1395 aa13.42□□□□□ -0.26
PPP4R1-210ENST00000578557 KIF14Q15058 1648 aa13.4□□□□□ -0.26
PPP4R1-210ENST00000578557 CAPN15O75808 1086 aa13.4□□□□□ -0.26
PPP4R1-210ENST00000578557 RAPGEF3O95398 923 aa13.4□□□□□ -0.26
PPP4R1-210ENST00000578557 CFAP74Q9C0B2 1584 aa13.4□□□□□ -0.26
PPP4R1-210ENST00000578557 SCAPERQ9BY12 1400 aa13.39□□□□□ -0.27
PPP4R1-210ENST00000578557 PLEKHH2Q8IVE3 1493 aa13.39□□□□□ -0.27
PPP4R1-210ENST00000578557 KIAA1107Q9UPP5 1409 aa13.39□□□□□ -0.27
PPP4R1-210ENST00000578557 PCF11O94913 1555 aaKnown RBP13.38□□□□□ -0.27
PPP4R1-210ENST00000578557 PPRC1Q5VV67 1664 aaKnown RBP13.37□□□□□ -0.27
PPP4R1-210ENST00000578557 ADGRL1O94910 1474 aa13.37□□□□□ -0.27
PPP4R1-210ENST00000578557 ZNF518AQ6AHZ1 1483 aa13.36□□□□□ -0.27
PPP4R1-210ENST00000578557 ZNF219Q9P2Y4 722 aaPredicted RBP13.35□□□□□ -0.27
PPP4R1-210ENST00000578557 ARHGAP5Q13017 1502 aa13.34□□□□□ -0.27
PPP4R1-210ENST00000578557 EHBP1L1Q8N3D4 1523 aa13.34□□□□□ -0.27
PPP4R1-210ENST00000578557 GPATCH8Q9UKJ3 1502 aaKnown RBP13.34□□□□□ -0.27
PPP4R1-210ENST00000578557 POGZQ7Z3K3 1410 aa13.33□□□□□ -0.28
PPP4R1-210ENST00000578557 ATF5Q9Y2D1 282 aaPredicted RBP13.33□□□□□ -0.28
PPP4R1-210ENST00000578557 TSPOAP1O95153 1857 aa13.33□□□□□ -0.28
PPP4R1-210ENST00000578557 LRRC9Q6ZRR7 1453 aa13.31□□□□□ -0.28
PPP4R1-210ENST00000578557 TSPY4P0CV99 314 aa13.31□□□□□ -0.28
PPP4R1-210ENST00000578557 TSPY10P0CW01 314 aa13.31□□□□□ -0.28
PPP4R1-210ENST00000578557 AFAP1Q8N556 730 aa13.31□□□□□ -0.28
PPP4R1-210ENST00000578557 MYT1LQ9UL68 1186 aa13.31□□□□□ -0.28
PPP4R1-210ENST00000578557 ZNF777Q9ULD5 760 aaPredicted RBP13.31□□□□□ -0.28
PPP4R1-210ENST00000578557 MIA2Q96PC5 1412 aa13.3□□□□□ -0.28
PPP4R1-210ENST00000578557 MLH3Q9UHC1 1453 aa13.3□□□□□ -0.28
PPP4R1-210ENST00000578557 TTC37Q6PGP7 1564 aa13.3□□□□□ -0.28
PPP4R1-210ENST00000578557 KDM4FA0A1W2PPD8 638 aa13.29□□□□□ -0.28
PPP4R1-210ENST00000578557 SPAG9O60271 1321 aaKnown RBP13.29□□□□□ -0.28
PPP4R1-210ENST00000578557 ARID4BQ4LE39 1312 aaPredicted RBP13.29□□□□□ -0.28
PPP4R1-210ENST00000578557 ATP10AO60312 1499 aa13.28□□□□□ -0.28
PPP4R1-210ENST00000578557 ZMYM4Q5VZL5 1548 aa13.28□□□□□ -0.28
PPP4R1-210ENST00000578557 RTEL1-TNFRSF6BF6WH68 1400 aa13.27□□□□□ -0.29
PPP4R1-210ENST00000578557 TIAM1Q13009 1591 aa13.27□□□□□ -0.29
PPP4R1-210ENST00000578557 HNRNPMP52272 730 aaKnown RBP eCLIP13.26□□□□□ -0.29
PPP4R1-210ENST00000578557 NCOA2Q15596 1464 aa13.26□□□□□ -0.29
PPP4R1-210ENST00000578557 KANK4Q5T7N3 995 aaPredicted RBP13.26□□□□□ -0.29
PPP4R1-210ENST00000578557 MYO5CQ9NQX4 1742 aa13.24□□□□□ -0.29
PPP4R1-210ENST00000578557 C9orf84Q5VXU9 1444 aa13.23□□□□□ -0.29
PPP4R1-210ENST00000578557 ESF1Q9H501 851 aaKnown RBP13.23□□□□□ -0.29
PPP4R1-210ENST00000578557 ZFYVE16Q7Z3T8 1539 aa13.23□□□□□ -0.29
PPP4R1-210ENST00000578557 MYOM3Q5VTT5 1437 aa13.22□□□□□ -0.29
PPP4R1-210ENST00000578557 TRAPPC8Q9Y2L5 1435 aa13.22□□□□□ -0.29
PPP4R1-210ENST00000578557 PREX2Q70Z35 1606 aa13.21□□□□□ -0.29
PPP4R1-210ENST00000578557 DSG3P32926 999 aa13.21□□□□□ -0.29
PPP4R1-210ENST00000578557 KDM5CP41229 1560 aa13.2□□□□□ -0.3
PPP4R1-210ENST00000578557 ABCC1P33527 1531 aa13.2□□□□□ -0.3
PPP4R1-210ENST00000578557 MBD5Q9P267 1494 aa13.2□□□□□ -0.3
PPP4R1-210ENST00000578557 SUPT6HQ7KZ85 1726 aaKnown RBP13.19□□□□□ -0.3
PPP4R1-210ENST00000578557 YEATS2Q9ULM3 1422 aa13.18□□□□□ -0.3
PPP4R1-210ENST00000578557 ARHGEF12Q9NZN5 1544 aa13.18□□□□□ -0.3
PPP4R1-210ENST00000578557 ZNF644Q9H582 1327 aaPredicted RBP13.17□□□□□ -0.3
PPP4R1-210ENST00000578557 LRRIQ1Q96JM4 1722 aa13.17□□□□□ -0.3
PPP4R1-210ENST00000578557 FRMPD1Q5SYB0 1578 aa13.17□□□□□ -0.3
PPP4R1-210ENST00000578557 REREQ9P2R6 1566 aa13.17□□□□□ -0.3
PPP4R1-210ENST00000578557 AGLP35573 1532 aa13.17□□□□□ -0.3
PPP4R1-210ENST00000578557 ARHGEF40Q8TER5 1519 aa13.17□□□□□ -0.3
PPP4R1-210ENST00000578557 DHX29Q7Z478 1369 aaKnown RBP13.17□□□□□ -0.3
PPP4R1-210ENST00000578557 RICTORQ6R327 1708 aa13.16□□□□□ -0.3
PPP4R1-210ENST00000578557 CCDC141Q6ZP82 1450 aa13.16□□□□□ -0.3
PPP4R1-210ENST00000578557 ITSN2Q9NZM3 1697 aa13.15□□□□□ -0.31
PPP4R1-210ENST00000578557 CNTLNQ9NXG0 1405 aa13.14□□□□□ -0.31
PPP4R1-210ENST00000578557 CDC42BPBQ9Y5S2 1711 aa13.14□□□□□ -0.31
PPP4R1-210ENST00000578557 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.14□□□□□ -0.31
PPP4R1-210ENST00000578557 SAMD9LQ8IVG5 1584 aa13.13□□□□□ -0.31
PPP4R1-210ENST00000578557 HECW2Q9P2P5 1572 aa13.13□□□□□ -0.31
PPP4R1-210ENST00000578557 SYCP2Q9BX26 1530 aa13.13□□□□□ -0.31
PPP4R1-210ENST00000578557 CAMSAP2Q08AD1 1489 aa13.12□□□□□ -0.31
PPP4R1-210ENST00000578557 ABCB7O75027 752 aa13.12□□□□□ -0.31
PPP4R1-210ENST00000578557 A2MP01023 1474 aa13.11□□□□□ -0.31
PPP4R1-210ENST00000578557 CDC42BPAQ5VT25 1732 aa13.11□□□□□ -0.31
PPP4R1-210ENST00000578557 FGD6Q6ZV73 1430 aa13.11□□□□□ -0.31
PPP4R1-210ENST00000578557 ARHGEF5Q12774 1597 aa13.11□□□□□ -0.31
PPP4R1-210ENST00000578557 POLA2Q14181 598 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms