RNA–Protein interactions for RNA: ENST00000578411.1

SSH2-207, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 2

Gene SSH2, Length 633 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-207ENST00000578411 PRXQ9BXM0 1461 aa20.75■□□□□ 0.91
SSH2-207ENST00000578411 NUP153P49790 1475 aaKnown RBP20.75■□□□□ 0.91
SSH2-207ENST00000578411 HECW1Q76N89 1606 aa20.75■□□□□ 0.91
SSH2-207ENST00000578411 MLECQ14165 292 aa20.74■□□□□ 0.91
SSH2-207ENST00000578411 P3H3Q8IVL6 736 aa20.74■□□□□ 0.91
SSH2-207ENST00000578411 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.73■□□□□ 0.91
SSH2-207ENST00000578411 HNRNPUL2Q1KMD3 747 aaKnown RBP20.73■□□□□ 0.91
SSH2-207ENST00000578411 DMRT2Q9Y5R5 561 aa20.72■□□□□ 0.91
SSH2-207ENST00000578411 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.72■□□□□ 0.91
SSH2-207ENST00000578411 UHRF1BP1Q6BDS2 1440 aa20.7■□□□□ 0.9
SSH2-207ENST00000578411 IQSEC2Q5JU85 1478 aa20.68■□□□□ 0.9
SSH2-207ENST00000578411 C9orf84Q5VXU9 1444 aa20.67■□□□□ 0.9
SSH2-207ENST00000578411 LTBP4Q8N2S1 1624 aa20.66■□□□□ 0.9
SSH2-207ENST00000578411 PTPRTO14522 1441 aa20.65■□□□□ 0.9
SSH2-207ENST00000578411 ATP10AO60312 1499 aa20.63■□□□□ 0.89
SSH2-207ENST00000578411 PIAS4Q8N2W9 510 aaPredicted RBP20.61■□□□□ 0.89
SSH2-207ENST00000578411 CEBPAP49715 358 aaPredicted RBP20.6■□□□□ 0.89
SSH2-207ENST00000578411 SCAPERQ9BY12 1400 aa20.59■□□□□ 0.89
SSH2-207ENST00000578411 PLEKHD1A6NEE1 506 aa20.58■□□□□ 0.89
SSH2-207ENST00000578411 C3P01024 1663 aa20.57■□□□□ 0.88
SSH2-207ENST00000578411 SETD1BQ9UPS6 1966 aaKnown RBP20.56■□□□□ 0.88
SSH2-207ENST00000578411 POTEDQ86YR6 584 aa20.54■□□□□ 0.88
SSH2-207ENST00000578411 MYO5CQ9NQX4 1742 aa20.52■□□□□ 0.88
SSH2-207ENST00000578411 NCOA1Q15788 1441 aa20.52■□□□□ 0.87
SSH2-207ENST00000578411 PLCH2O75038 1416 aa20.51■□□□□ 0.87
SSH2-207ENST00000578411 KDM5CP41229 1560 aa20.5■□□□□ 0.87
SSH2-207ENST00000578411 REREQ9P2R6 1566 aa20.5■□□□□ 0.87
SSH2-207ENST00000578411 DIP2CQ9Y2E4 1556 aa20.5■□□□□ 0.87
SSH2-207ENST00000578411 CDK13Q14004 1512 aaKnown RBP20.49■□□□□ 0.87
SSH2-207ENST00000578411 PPP6R1Q9UPN7 881 aa20.49■□□□□ 0.87
SSH2-207ENST00000578411 ZNF518AQ6AHZ1 1483 aa20.49■□□□□ 0.87
SSH2-207ENST00000578411 ABCA6Q8N139 1617 aa20.45■□□□□ 0.87
SSH2-207ENST00000578411 MED1Q15648 1581 aaPredicted RBP20.45■□□□□ 0.86
SSH2-207ENST00000578411 CAMSAP1Q5T5Y3 1602 aa20.43■□□□□ 0.86
SSH2-207ENST00000578411 ADRA2BP18089 450 aa20.43■□□□□ 0.86
SSH2-207ENST00000578411 TRAPPC8Q9Y2L5 1435 aa20.43■□□□□ 0.86
SSH2-207ENST00000578411 UBAP1LF5GYI3 381 aa20.4■□□□□ 0.86
SSH2-207ENST00000578411 AGLP35573 1532 aa20.4■□□□□ 0.86
SSH2-207ENST00000578411 RANGAP1P46060 587 aaPredicted RBP20.4■□□□□ 0.86
SSH2-207ENST00000578411 KIF14Q15058 1648 aa20.38■□□□□ 0.85
SSH2-207ENST00000578411 ARHGAP5Q13017 1502 aa20.38■□□□□ 0.85
SSH2-207ENST00000578411 EFCAB2Q5VUJ9 269 aa20.37■□□□□ 0.85
SSH2-207ENST00000578411 CNTLNQ9NXG0 1405 aa20.36■□□□□ 0.85
SSH2-207ENST00000578411 ZNF335Q9H4Z2 1342 aaPredicted RBP20.36■□□□□ 0.85
SSH2-207ENST00000578411 MROH2AA6NES4 1674 aa20.35■□□□□ 0.85
SSH2-207ENST00000578411 ESF1Q9H501 851 aaKnown RBP20.35■□□□□ 0.85
SSH2-207ENST00000578411 ZNF142P52746 1687 aaPredicted RBP20.35■□□□□ 0.85
SSH2-207ENST00000578411 MLH3Q9UHC1 1453 aa20.33■□□□□ 0.85
SSH2-207ENST00000578411 MYT1LQ9UL68 1186 aa20.33■□□□□ 0.85
SSH2-207ENST00000578411 MYO3AQ8NEV4 1616 aa20.33■□□□□ 0.84
SSH2-207ENST00000578411 NPATQ14207 1427 aa20.33■□□□□ 0.84
SSH2-207ENST00000578411 AFAP1Q8N556 730 aa20.32■□□□□ 0.84
SSH2-207ENST00000578411 SUPT6HQ7KZ85 1726 aaKnown RBP20.32■□□□□ 0.84
SSH2-207ENST00000578411 PLA2R1Q13018 1463 aa20.3■□□□□ 0.84
SSH2-207ENST00000578411 ABCC1P33527 1531 aa20.29■□□□□ 0.84
SSH2-207ENST00000578411 ITSN2Q9NZM3 1697 aa20.29■□□□□ 0.84
SSH2-207ENST00000578411 CSRNP3Q8WYN3 585 aa20.28■□□□□ 0.84
SSH2-207ENST00000578411 NCKAP5LQ9HCH0 1330 aa20.27■□□□□ 0.84
SSH2-207ENST00000578411 CEP170BQ9Y4F5 1589 aaPredicted RBP20.26■□□□□ 0.83
SSH2-207ENST00000578411 TCOF1Q13428 1488 aaKnown RBP20.26■□□□□ 0.83
SSH2-207ENST00000578411 CDC42BPBQ9Y5S2 1711 aa20.26■□□□□ 0.83
SSH2-207ENST00000578411 KIDINS220Q9ULH0 1771 aa20.26■□□□□ 0.83
SSH2-207ENST00000578411 PREX2Q70Z35 1606 aa20.25■□□□□ 0.83
SSH2-207ENST00000578411 HSPA1LP34931 641 aa20.23■□□□□ 0.83
SSH2-207ENST00000578411 TROQ12816 1431 aaPredicted RBP20.23■□□□□ 0.83
SSH2-207ENST00000578411 SCAF1Q9H7N4 1312 aaKnown RBP20.23■□□□□ 0.83
SSH2-207ENST00000578411 CLIP1P30622 1438 aa20.22■□□□□ 0.83
SSH2-207ENST00000578411 CLTCQ00610 1675 aaKnown RBP20.21■□□□□ 0.83
SSH2-207ENST00000578411 PKD2Q13563 968 aa20.2■□□□□ 0.82
SSH2-207ENST00000578411 CDK11AQ9UQ88 783 aaPredicted RBP20.18■□□□□ 0.82
SSH2-207ENST00000578411 FMN1Q68DA7 1419 aa20.18■□□□□ 0.82
SSH2-207ENST00000578411 CPS1P31327 1500 aa20.17■□□□□ 0.82
SSH2-207ENST00000578411 PIP4K2BP78356 416 aa20.17■□□□□ 0.82
SSH2-207ENST00000578411 ZMYM3Q14202 1370 aa20.17■□□□□ 0.82
SSH2-207ENST00000578411 EEA1Q15075 1411 aa20.17■□□□□ 0.82
SSH2-207ENST00000578411 POLR1AO95602 1720 aaPredicted RBP20.16■□□□□ 0.82
SSH2-207ENST00000578411 LRRIQ1Q96JM4 1722 aa20.16■□□□□ 0.82
SSH2-207ENST00000578411 ATP1B4Q9UN42 357 aaPredicted RBP20.15■□□□□ 0.82
SSH2-207ENST00000578411 SAMD9LQ8IVG5 1584 aa20.13■□□□□ 0.81
SSH2-207ENST00000578411 PTPRKQ15262 1439 aa20.13■□□□□ 0.81
SSH2-207ENST00000578411 TOM1O60784 492 aa20.12■□□□□ 0.81
SSH2-207ENST00000578411 PLXNC1O60486 1568 aa20.12■□□□□ 0.81
SSH2-207ENST00000578411 NEURL4Q96JN8 1562 aa20.11■□□□□ 0.81
SSH2-207ENST00000578411 CDC42BPAQ5VT25 1732 aa20.1■□□□□ 0.81
SSH2-207ENST00000578411 DNMT1P26358 1616 aaKnown RBP20.09■□□□□ 0.81
SSH2-207ENST00000578411 SHANK2Q9UPX8 1470 aa20.08■□□□□ 0.81
SSH2-207ENST00000578411 ALKQ9UM73 1620 aa20.08■□□□□ 0.8
SSH2-207ENST00000578411 A2ML1A8K2U0 1454 aa20.07■□□□□ 0.8
SSH2-207ENST00000578411 SYCP2Q9BX26 1530 aa20.07■□□□□ 0.8
SSH2-207ENST00000578411 INO80Q9ULG1 1556 aaPredicted RBP20.06■□□□□ 0.8
SSH2-207ENST00000578411 ATP7AQ04656 1500 aa20.06■□□□□ 0.8
SSH2-207ENST00000578411 ARHGAP35Q9NRY4 1499 aa20.05■□□□□ 0.8
SSH2-207ENST00000578411 VWDEQ8N2E2 1590 aa20.04■□□□□ 0.8
SSH2-207ENST00000578411 A2MP01023 1474 aa20.01■□□□□ 0.79
SSH2-207ENST00000578411 RNF17Q9BXT8 1623 aaKnown RBP20■□□□□ 0.79
SSH2-207ENST00000578411 SPAG9O60271 1321 aaKnown RBP19.99■□□□□ 0.79
SSH2-207ENST00000578411 CCDC18Q5T9S5 1454 aa19.99■□□□□ 0.79
SSH2-207ENST00000578411 ADGBQ8N7X0 1667 aa19.97■□□□□ 0.79
SSH2-207ENST00000578411 SYNMO15061 1565 aa19.96■□□□□ 0.79
SSH2-207ENST00000578411 GGT6Q6P531 493 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms