RNA–Protein interactions for RNA: ENST00000578357.5

CUEDC1-208, Transcript of CUE domain containing 1, humanhuman

TSL 3

Gene CUEDC1, Length 661 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-208ENST00000578357 ZMYM4Q5VZL5 1548 aa16.6■□□□□ 0.25
CUEDC1-208ENST00000578357 UBTFP17480 764 aaKnown RBP16.59■□□□□ 0.25
CUEDC1-208ENST00000578357 TTC37Q6PGP7 1564 aa16.57■□□□□ 0.24
CUEDC1-208ENST00000578357 ATP10AO60312 1499 aa16.57■□□□□ 0.24
CUEDC1-208ENST00000578357 DMRT2Q9Y5R5 561 aa16.56■□□□□ 0.24
CUEDC1-208ENST00000578357 HECW1Q76N89 1606 aa16.56■□□□□ 0.24
CUEDC1-208ENST00000578357 CDK13Q14004 1512 aaKnown RBP16.55■□□□□ 0.24
CUEDC1-208ENST00000578357 CEBPAP49715 358 aaPredicted RBP16.54■□□□□ 0.24
CUEDC1-208ENST00000578357 MYT1LQ9UL68 1186 aa16.54■□□□□ 0.24
CUEDC1-208ENST00000578357 FMN1Q68DA7 1419 aa16.53■□□□□ 0.24
CUEDC1-208ENST00000578357 AFAP1Q8N556 730 aa16.52■□□□□ 0.24
CUEDC1-208ENST00000578357 EHMT2Q96KQ7 1210 aa16.52■□□□□ 0.24
CUEDC1-208ENST00000578357 C9orf84Q5VXU9 1444 aa16.52■□□□□ 0.23
CUEDC1-208ENST00000578357 SIGLEC1Q9BZZ2 1709 aa16.49■□□□□ 0.23
CUEDC1-208ENST00000578357 ESF1Q9H501 851 aaKnown RBP16.48■□□□□ 0.23
CUEDC1-208ENST00000578357 ARHGEF12Q9NZN5 1544 aa16.48■□□□□ 0.23
CUEDC1-208ENST00000578357 ZNF518AQ6AHZ1 1483 aa16.48■□□□□ 0.23
CUEDC1-208ENST00000578357 FER1L4A9Z1Z3 1794 aa16.47■□□□□ 0.23
CUEDC1-208ENST00000578357 CLIP1P30622 1438 aa16.45■□□□□ 0.22
CUEDC1-208ENST00000578357 TROQ12816 1431 aaPredicted RBP16.45■□□□□ 0.22
CUEDC1-208ENST00000578357 CHIC1Q5VXU3 224 aa16.43■□□□□ 0.22
CUEDC1-208ENST00000578357 ARHGAP5Q13017 1502 aa16.43■□□□□ 0.22
CUEDC1-208ENST00000578357 UHRF1BP1Q6BDS2 1440 aa16.43■□□□□ 0.22
CUEDC1-208ENST00000578357 ARHGAP35Q9NRY4 1499 aa16.42■□□□□ 0.22
CUEDC1-208ENST00000578357 MYO5CQ9NQX4 1742 aa16.42■□□□□ 0.22
CUEDC1-208ENST00000578357 PREX1Q8TCU6 1659 aa16.4■□□□□ 0.22
CUEDC1-208ENST00000578357 KIF14Q15058 1648 aa16.4■□□□□ 0.22
CUEDC1-208ENST00000578357 SETD1BQ9UPS6 1966 aaKnown RBP16.4■□□□□ 0.22
CUEDC1-208ENST00000578357 MLH3Q9UHC1 1453 aa16.39■□□□□ 0.21
CUEDC1-208ENST00000578357 KDM5CP41229 1560 aa16.38■□□□□ 0.21
CUEDC1-208ENST00000578357 DISP3Q9P2K9 1392 aa16.37■□□□□ 0.21
CUEDC1-208ENST00000578357 PTPRTO14522 1441 aa16.36■□□□□ 0.21
CUEDC1-208ENST00000578357 TRAPPC8Q9Y2L5 1435 aa16.36■□□□□ 0.21
CUEDC1-208ENST00000578357 REREQ9P2R6 1566 aa16.34■□□□□ 0.21
CUEDC1-208ENST00000578357 DIP2CQ9Y2E4 1556 aa16.34■□□□□ 0.21
CUEDC1-208ENST00000578357 STRCQ7RTU9 1775 aa16.33■□□□□ 0.21
CUEDC1-208ENST00000578357 AGLP35573 1532 aa16.33■□□□□ 0.2
CUEDC1-208ENST00000578357 CNTLNQ9NXG0 1405 aa16.32■□□□□ 0.2
CUEDC1-208ENST00000578357 ZNF777Q9ULD5 760 aaPredicted RBP16.32■□□□□ 0.2
CUEDC1-208ENST00000578357 ILDR2Q71H61 639 aa16.31■□□□□ 0.2
CUEDC1-208ENST00000578357 CCDC18Q5T9S5 1454 aa16.3■□□□□ 0.2
CUEDC1-208ENST00000578357 CASKIN1Q8WXD9 1431 aa16.3■□□□□ 0.2
CUEDC1-208ENST00000578357 SOCS7O14512 581 aa16.3■□□□□ 0.2
CUEDC1-208ENST00000578357 CDC42BPBQ9Y5S2 1711 aa16.29■□□□□ 0.2
CUEDC1-208ENST00000578357 SPAG9O60271 1321 aaKnown RBP16.28■□□□□ 0.2
CUEDC1-208ENST00000578357 ZMYM3Q14202 1370 aa16.27■□□□□ 0.2
CUEDC1-208ENST00000578357 ABCA6Q8N139 1617 aa16.27■□□□□ 0.2
CUEDC1-208ENST00000578357 HNRNPMP52272 730 aaKnown RBP eCLIP16.27■□□□□ 0.2
CUEDC1-208ENST00000578357 ABCC1P33527 1531 aa16.27■□□□□ 0.2
CUEDC1-208ENST00000578357 C3P01024 1663 aa16.27■□□□□ 0.19
CUEDC1-208ENST00000578357 PREX2Q70Z35 1606 aa16.25■□□□□ 0.19
CUEDC1-208ENST00000578357 NPATQ14207 1427 aa16.25■□□□□ 0.19
CUEDC1-208ENST00000578357 NCOA1Q15788 1441 aa16.25■□□□□ 0.19
CUEDC1-208ENST00000578357 CFDP1Q9UEE9 299 aaPredicted RBP16.24■□□□□ 0.19
CUEDC1-208ENST00000578357 LRRIQ1Q96JM4 1722 aa16.24■□□□□ 0.19
CUEDC1-208ENST00000578357 IQSEC2Q5JU85 1478 aa16.22■□□□□ 0.19
CUEDC1-208ENST00000578357 NCKAP5LQ9HCH0 1330 aa16.22■□□□□ 0.19
CUEDC1-208ENST00000578357 PKD2Q13563 968 aa16.22■□□□□ 0.19
CUEDC1-208ENST00000578357 PPP6R1Q9UPN7 881 aa16.22■□□□□ 0.19
CUEDC1-208ENST00000578357 KIDINS220Q9ULH0 1771 aa16.22■□□□□ 0.19
CUEDC1-208ENST00000578357 LTBP4Q8N2S1 1624 aa16.22■□□□□ 0.19
CUEDC1-208ENST00000578357 ITSN2Q9NZM3 1697 aa16.21■□□□□ 0.19
CUEDC1-208ENST00000578357 GGT6Q6P531 493 aa16.21■□□□□ 0.19
CUEDC1-208ENST00000578357 GPATCH8Q9UKJ3 1502 aaKnown RBP16.2■□□□□ 0.18
CUEDC1-208ENST00000578357 SAMD9LQ8IVG5 1584 aa16.2■□□□□ 0.18
CUEDC1-208ENST00000578357 KIAA1107Q9UPP5 1409 aa16.19■□□□□ 0.18
CUEDC1-208ENST00000578357 FYCO1Q9BQS8 1478 aa16.19■□□□□ 0.18
CUEDC1-208ENST00000578357 CAMSAP1Q5T5Y3 1602 aa16.19■□□□□ 0.18
CUEDC1-208ENST00000578357 CCNB3Q8WWL7 1395 aa16.18■□□□□ 0.18
CUEDC1-208ENST00000578357 UBAP1LF5GYI3 381 aa16.18■□□□□ 0.18
CUEDC1-208ENST00000578357 PLEKHH2Q8IVE3 1493 aa16.17■□□□□ 0.18
CUEDC1-208ENST00000578357 CDC42BPAQ5VT25 1732 aa16.17■□□□□ 0.18
CUEDC1-208ENST00000578357 ZNF335Q9H4Z2 1342 aaPredicted RBP16.17■□□□□ 0.18
CUEDC1-208ENST00000578357 A2MP01023 1474 aa16.16■□□□□ 0.18
CUEDC1-208ENST00000578357 SYCP2Q9BX26 1530 aa16.15■□□□□ 0.18
CUEDC1-208ENST00000578357 MROH2AA6NES4 1674 aa16.15■□□□□ 0.18
CUEDC1-208ENST00000578357 PTPRKQ15262 1439 aa16.13■□□□□ 0.17
CUEDC1-208ENST00000578357 ATP7AQ04656 1500 aa16.13■□□□□ 0.17
CUEDC1-208ENST00000578357 MTUS2Q5JR59 1369 aa16.13■□□□□ 0.17
CUEDC1-208ENST00000578357 PLA2R1Q13018 1463 aa16.12■□□□□ 0.17
CUEDC1-208ENST00000578357 SUPT6HQ7KZ85 1726 aaKnown RBP16.12■□□□□ 0.17
CUEDC1-208ENST00000578357 SPATA31D1Q6ZQQ2 1576 aa16.12■□□□□ 0.17
CUEDC1-208ENST00000578357 ZNF644Q9H582 1327 aaPredicted RBP16.1■□□□□ 0.17
CUEDC1-208ENST00000578357 TCOF1Q13428 1488 aaKnown RBP16.09■□□□□ 0.17
CUEDC1-208ENST00000578357 CLTCQ00610 1675 aaKnown RBP16.08■□□□□ 0.17
CUEDC1-208ENST00000578357 PLXNC1O60486 1568 aa16.08■□□□□ 0.16
CUEDC1-208ENST00000578357 DHX29Q7Z478 1369 aaKnown RBP16.07■□□□□ 0.16
CUEDC1-208ENST00000578357 INO80Q9ULG1 1556 aaPredicted RBP16.06■□□□□ 0.16
CUEDC1-208ENST00000578357 CEP170BQ9Y4F5 1589 aaPredicted RBP16.06■□□□□ 0.16
CUEDC1-208ENST00000578357 RTEL1-TNFRSF6BF6WH68 1400 aa16.06■□□□□ 0.16
CUEDC1-208ENST00000578357 KIF3BO15066 747 aa16.06■□□□□ 0.16
CUEDC1-208ENST00000578357 TOM1O60784 492 aa16.06■□□□□ 0.16
CUEDC1-208ENST00000578357 RSPH4AQ5TD94 716 aa16.06■□□□□ 0.16
CUEDC1-208ENST00000578357 FBXO31Q5XUX0 539 aaPredicted RBP16.05■□□□□ 0.16
CUEDC1-208ENST00000578357 A2ML1A8K2U0 1454 aa16.04■□□□□ 0.16
CUEDC1-208ENST00000578357 SCAF1Q9H7N4 1312 aaKnown RBP16.04■□□□□ 0.16
CUEDC1-208ENST00000578357 WASHC2CQ9Y4E1 1318 aa16.04■□□□□ 0.16
CUEDC1-208ENST00000578357 ANKLE2Q86XL3 938 aa16.04■□□□□ 0.16
CUEDC1-208ENST00000578357 THEMISQ8N1K5 641 aaPredicted RBP16.04■□□□□ 0.16
CUEDC1-208ENST00000578357 MYO3AQ8NEV4 1616 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms