RNA–Protein interactions for RNA: ENST00000578158.5

TNFAIP1-204, Transcript of TNF alpha induced protein 1, humanhuman

TSL 4

Gene TNFAIP1, Length 536 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-204ENST00000578158 KANK4Q5T7N3 995 aaPredicted RBP19.86■□□□□ 0.77
TNFAIP1-204ENST00000578158 MADDQ8WXG6 1647 aa19.86■□□□□ 0.77
TNFAIP1-204ENST00000578158 TIAM1Q13009 1591 aa19.86■□□□□ 0.77
TNFAIP1-204ENST00000578158 PHLDB1Q86UU1 1377 aa19.84■□□□□ 0.77
TNFAIP1-204ENST00000578158 LRRC9Q6ZRR7 1453 aa19.83■□□□□ 0.76
TNFAIP1-204ENST00000578158 CFAP43Q8NDM7 1665 aa19.82■□□□□ 0.76
TNFAIP1-204ENST00000578158 DMRT2Q9Y5R5 561 aa19.82■□□□□ 0.76
TNFAIP1-204ENST00000578158 BCORL1Q5H9F3 1711 aa19.82■□□□□ 0.76
TNFAIP1-204ENST00000578158 EHBP1L1Q8N3D4 1523 aa19.77■□□□□ 0.76
TNFAIP1-204ENST00000578158 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.77■□□□□ 0.76
TNFAIP1-204ENST00000578158 ABCA9Q8IUA7 1624 aa19.76■□□□□ 0.75
TNFAIP1-204ENST00000578158 KIF14Q15058 1648 aa19.76■□□□□ 0.75
TNFAIP1-204ENST00000578158 YEATS2Q9ULM3 1422 aa19.76■□□□□ 0.75
TNFAIP1-204ENST00000578158 PLCH2O75038 1416 aa19.74■□□□□ 0.75
TNFAIP1-204ENST00000578158 CCNB3Q8WWL7 1395 aa19.71■□□□□ 0.75
TNFAIP1-204ENST00000578158 RIMS1Q86UR5 1692 aaKnown RBP19.71■□□□□ 0.75
TNFAIP1-204ENST00000578158 EFCAB2Q5VUJ9 269 aa19.7■□□□□ 0.74
TNFAIP1-204ENST00000578158 NCOA2Q15596 1464 aa19.7■□□□□ 0.74
TNFAIP1-204ENST00000578158 TTC37Q6PGP7 1564 aa19.69■□□□□ 0.74
TNFAIP1-204ENST00000578158 GPATCH8Q9UKJ3 1502 aaKnown RBP19.68■□□□□ 0.74
TNFAIP1-204ENST00000578158 PPARGC1BQ86YN6 1023 aaKnown RBP19.68■□□□□ 0.74
TNFAIP1-204ENST00000578158 SUPT6HQ7KZ85 1726 aaKnown RBP19.68■□□□□ 0.74
TNFAIP1-204ENST00000578158 POGZQ7Z3K3 1410 aa19.68■□□□□ 0.74
TNFAIP1-204ENST00000578158 CFDP1Q9UEE9 299 aaPredicted RBP19.67■□□□□ 0.74
TNFAIP1-204ENST00000578158 NEO1Q92859 1461 aa19.66■□□□□ 0.74
TNFAIP1-204ENST00000578158 MLECQ14165 292 aa19.65■□□□□ 0.74
TNFAIP1-204ENST00000578158 FANCAO15360 1455 aa19.63■□□□□ 0.73
TNFAIP1-204ENST00000578158 AKNAQ7Z591 1439 aa19.61■□□□□ 0.73
TNFAIP1-204ENST00000578158 MYO5CQ9NQX4 1742 aa19.6■□□□□ 0.73
TNFAIP1-204ENST00000578158 ZNF777Q9ULD5 760 aaPredicted RBP19.6■□□□□ 0.73
TNFAIP1-204ENST00000578158 FRMPD1Q5SYB0 1578 aa19.6■□□□□ 0.73
TNFAIP1-204ENST00000578158 ARHGAP5Q13017 1502 aa19.6■□□□□ 0.73
TNFAIP1-204ENST00000578158 PTPRTO14522 1441 aa19.59■□□□□ 0.73
TNFAIP1-204ENST00000578158 MYOM3Q5VTT5 1437 aa19.59■□□□□ 0.73
TNFAIP1-204ENST00000578158 MIA2Q96PC5 1412 aa19.59■□□□□ 0.73
TNFAIP1-204ENST00000578158 CEBPAP49715 358 aaPredicted RBP19.58■□□□□ 0.72
TNFAIP1-204ENST00000578158 IQSEC2Q5JU85 1478 aa19.58■□□□□ 0.72
TNFAIP1-204ENST00000578158 CDC42BPAQ5VT25 1732 aa19.57■□□□□ 0.72
TNFAIP1-204ENST00000578158 PREX2Q70Z35 1606 aa19.57■□□□□ 0.72
TNFAIP1-204ENST00000578158 CDC42BPBQ9Y5S2 1711 aa19.56■□□□□ 0.72
TNFAIP1-204ENST00000578158 ARHGEF40Q8TER5 1519 aa19.56■□□□□ 0.72
TNFAIP1-204ENST00000578158 CFAP74Q9C0B2 1584 aa19.55■□□□□ 0.72
TNFAIP1-204ENST00000578158 LTBP4Q8N2S1 1624 aa19.54■□□□□ 0.72
TNFAIP1-204ENST00000578158 ZNF644Q9H582 1327 aaPredicted RBP19.54■□□□□ 0.72
TNFAIP1-204ENST00000578158 UBAP1LF5GYI3 381 aa19.54■□□□□ 0.72
TNFAIP1-204ENST00000578158 DENND4BO75064 1496 aaPredicted RBP19.54■□□□□ 0.72
TNFAIP1-204ENST00000578158 SCAPERQ9BY12 1400 aa19.53■□□□□ 0.72
TNFAIP1-204ENST00000578158 KIAA1107Q9UPP5 1409 aa19.53■□□□□ 0.72
TNFAIP1-204ENST00000578158 ITSN2Q9NZM3 1697 aa19.52■□□□□ 0.72
TNFAIP1-204ENST00000578158 HNRNPMP52272 730 aaKnown RBP eCLIP19.52■□□□□ 0.72
TNFAIP1-204ENST00000578158 RSPH4AQ5TD94 716 aa19.52■□□□□ 0.72
TNFAIP1-204ENST00000578158 PLEKHH2Q8IVE3 1493 aa19.52■□□□□ 0.72
TNFAIP1-204ENST00000578158 STRCQ7RTU9 1775 aa19.51■□□□□ 0.71
TNFAIP1-204ENST00000578158 FGD6Q6ZV73 1430 aa19.51■□□□□ 0.71
TNFAIP1-204ENST00000578158 UHRF1BP1Q6BDS2 1440 aa19.5■□□□□ 0.71
TNFAIP1-204ENST00000578158 AFAP1Q8N556 730 aa19.48■□□□□ 0.71
TNFAIP1-204ENST00000578158 SAMD9LQ8IVG5 1584 aa19.48■□□□□ 0.71
TNFAIP1-204ENST00000578158 ARHGEF12Q9NZN5 1544 aa19.46■□□□□ 0.71
TNFAIP1-204ENST00000578158 CAMSAP2Q08AD1 1489 aa19.45■□□□□ 0.7
TNFAIP1-204ENST00000578158 MBD5Q9P267 1494 aa19.45■□□□□ 0.7
TNFAIP1-204ENST00000578158 ABCC1P33527 1531 aa19.45■□□□□ 0.7
TNFAIP1-204ENST00000578158 TCOF1Q13428 1488 aaKnown RBP19.44■□□□□ 0.7
TNFAIP1-204ENST00000578158 FAM50AQ14320 339 aaKnown RBP19.44■□□□□ 0.7
TNFAIP1-204ENST00000578158 TRAPPC8Q9Y2L5 1435 aa19.43■□□□□ 0.7
TNFAIP1-204ENST00000578158 PREX1Q8TCU6 1659 aa19.43■□□□□ 0.7
TNFAIP1-204ENST00000578158 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.43■□□□□ 0.7
TNFAIP1-204ENST00000578158 ZNF518AQ6AHZ1 1483 aa19.42■□□□□ 0.7
TNFAIP1-204ENST00000578158 TSPY4P0CV99 314 aa19.42■□□□□ 0.7
TNFAIP1-204ENST00000578158 TSPY10P0CW01 314 aa19.42■□□□□ 0.7
TNFAIP1-204ENST00000578158 PTPN23Q9H3S7 1636 aa19.42■□□□□ 0.7
TNFAIP1-204ENST00000578158 HSPA1LP34931 641 aa19.41■□□□□ 0.7
TNFAIP1-204ENST00000578158 RRBP1Q9P2E9 1410 aaKnown RBP19.41■□□□□ 0.7
TNFAIP1-204ENST00000578158 MAGI2Q86UL8 1455 aa19.41■□□□□ 0.7
TNFAIP1-204ENST00000578158 ZFYVE16Q7Z3T8 1539 aa19.41■□□□□ 0.7
TNFAIP1-204ENST00000578158 SYCP2Q9BX26 1530 aa19.41■□□□□ 0.7
TNFAIP1-204ENST00000578158 PHF23Q9BUL5 403 aaPredicted RBP19.39■□□□□ 0.69
TNFAIP1-204ENST00000578158 SPAG9O60271 1321 aaKnown RBP19.39■□□□□ 0.69
TNFAIP1-204ENST00000578158 SIGLEC1Q9BZZ2 1709 aa19.39■□□□□ 0.69
TNFAIP1-204ENST00000578158 MED1Q15648 1581 aaPredicted RBP19.38■□□□□ 0.69
TNFAIP1-204ENST00000578158 ARHGEF5Q12774 1597 aa19.36■□□□□ 0.69
TNFAIP1-204ENST00000578158 ZMYM4Q5VZL5 1548 aa19.36■□□□□ 0.69
TNFAIP1-204ENST00000578158 CCDC141Q6ZP82 1450 aa19.36■□□□□ 0.69
TNFAIP1-204ENST00000578158 MYT1LQ9UL68 1186 aa19.36■□□□□ 0.69
TNFAIP1-204ENST00000578158 RICTORQ6R327 1708 aa19.36■□□□□ 0.69
TNFAIP1-204ENST00000578158 MLH3Q9UHC1 1453 aa19.35■□□□□ 0.69
TNFAIP1-204ENST00000578158 ABCC5O15440 1437 aa19.35■□□□□ 0.69
TNFAIP1-204ENST00000578158 FER1L4A9Z1Z3 1794 aa19.35■□□□□ 0.69
TNFAIP1-204ENST00000578158 ZNF335Q9H4Z2 1342 aaPredicted RBP19.35■□□□□ 0.69
TNFAIP1-204ENST00000578158 KDM5CP41229 1560 aa19.34■□□□□ 0.69
TNFAIP1-204ENST00000578158 RTEL1-TNFRSF6BF6WH68 1400 aa19.34■□□□□ 0.69
TNFAIP1-204ENST00000578158 ATP10AO60312 1499 aa19.33■□□□□ 0.68
TNFAIP1-204ENST00000578158 NCOA1Q15788 1441 aa19.33■□□□□ 0.68
TNFAIP1-204ENST00000578158 DAPK1P53355 1430 aa19.32■□□□□ 0.68
TNFAIP1-204ENST00000578158 SCAF1Q9H7N4 1312 aaKnown RBP19.3■□□□□ 0.68
TNFAIP1-204ENST00000578158 C9orf84Q5VXU9 1444 aa19.29■□□□□ 0.68
TNFAIP1-204ENST00000578158 PIP4K2BP78356 416 aa19.29■□□□□ 0.68
TNFAIP1-204ENST00000578158 ITGAEP38570 1179 aa19.28■□□□□ 0.68
TNFAIP1-204ENST00000578158 CHIC2Q9UKJ5 165 aa19.28■□□□□ 0.68
TNFAIP1-204ENST00000578158 DNMT1P26358 1616 aaKnown RBP19.28■□□□□ 0.68
TNFAIP1-204ENST00000578158 NCKAP5LQ9HCH0 1330 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms