RNA–Protein interactions for RNA: ENST00000578078.1

KRT39-203, Transcript of keratin 39, humanhuman

TSL 1 (best)

Gene KRT39, Length 1,689 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39-203ENST00000578078 TRHP20396 242 aaPredicted RBP9.94□□□□□ -0.82
KRT39-203ENST00000578078 FHAD1B1AJZ9 1412 aa9.94□□□□□ -0.82
KRT39-203ENST00000578078 CCER1Q8TC90 406 aaPredicted RBP9.93□□□□□ -0.82
KRT39-203ENST00000578078 MAP3K1Q13233 1512 aa9.93□□□□□ -0.82
KRT39-203ENST00000578078 CFAP43Q8NDM7 1665 aa9.93□□□□□ -0.82
KRT39-203ENST00000578078 ERCC6Q03468 1493 aa9.92□□□□□ -0.82
KRT39-203ENST00000578078 IFT140Q96RY7 1462 aa9.92□□□□□ -0.82
KRT39-203ENST00000578078 ZMYND15Q9H091 742 aa9.92□□□□□ -0.82
KRT39-203ENST00000578078 SUPT16HQ9Y5B9 1047 aaKnown RBP9.92□□□□□ -0.82
KRT39-203ENST00000578078 ADAMTS12P58397 1594 aa9.91□□□□□ -0.82
KRT39-203ENST00000578078 TIAM1Q13009 1591 aa9.91□□□□□ -0.82
KRT39-203ENST00000578078 ERICH6BQ5W0A0 696 aa9.91□□□□□ -0.82
KRT39-203ENST00000578078 RSPH6AQ9H0K4 717 aa9.91□□□□□ -0.82
KRT39-203ENST00000578078 PCF11O94913 1555 aaKnown RBP9.91□□□□□ -0.82
KRT39-203ENST00000578078 POTEDQ86YR6 584 aa9.9□□□□□ -0.82
KRT39-203ENST00000578078 THOC2Q8NI27 1593 aaKnown RBP9.9□□□□□ -0.82
KRT39-203ENST00000578078 SAMD9Q5K651 1589 aa9.9□□□□□ -0.83
KRT39-203ENST00000578078 GRIN2BQ13224 1484 aa9.89□□□□□ -0.83
KRT39-203ENST00000578078 KCNV2Q8TDN2 545 aa9.89□□□□□ -0.83
KRT39-203ENST00000578078 ZBTB47Q9UFB7 747 aaPredicted RBP9.89□□□□□ -0.83
KRT39-203ENST00000578078 FYCO1Q9BQS8 1478 aa9.88□□□□□ -0.83
KRT39-203ENST00000578078 POLA2Q14181 598 aa9.88□□□□□ -0.83
KRT39-203ENST00000578078 ZC3H15Q8WU90 426 aaKnown RBP9.88□□□□□ -0.83
KRT39-203ENST00000578078 AQRO60306 1485 aaKnown RBP eCLIP9.88□□□□□ -0.83
KRT39-203ENST00000578078 EIF4G3O43432 1585 aaKnown RBP9.87□□□□□ -0.83
KRT39-203ENST00000578078 FHOD3Q2V2M9 1422 aa9.86□□□□□ -0.83
KRT39-203ENST00000578078 FMN1Q68DA7 1419 aa9.86□□□□□ -0.83
KRT39-203ENST00000578078 KANK4Q5T7N3 995 aaPredicted RBP9.85□□□□□ -0.83
KRT39-203ENST00000578078 SLC24A3Q9HC58 644 aa9.85□□□□□ -0.83
KRT39-203ENST00000578078 CASKIN1Q8WXD9 1431 aa9.85□□□□□ -0.83
KRT39-203ENST00000578078 IQGAP2Q13576 1575 aa9.85□□□□□ -0.83
KRT39-203ENST00000578078 LRRC9Q6ZRR7 1453 aa9.84□□□□□ -0.83
KRT39-203ENST00000578078 RIOK3O14730 519 aaKnown RBP9.84□□□□□ -0.83
KRT39-203ENST00000578078 RYDENQ9NUL5 291 aaKnown RBP9.84□□□□□ -0.83
KRT39-203ENST00000578078 RRBP1Q9P2E9 1410 aaKnown RBP9.84□□□□□ -0.83
KRT39-203ENST00000578078 ZNF608Q9ULD9 1512 aaPredicted RBP9.83□□□□□ -0.84
KRT39-203ENST00000578078 STK25O00506 426 aa9.82□□□□□ -0.84
KRT39-203ENST00000578078 SNAPC4Q5SXM2 1469 aa9.81□□□□□ -0.84
KRT39-203ENST00000578078 CCDC9Q9Y3X0 531 aaKnown RBP9.8□□□□□ -0.84
KRT39-203ENST00000578078 CCNB3Q8WWL7 1395 aa9.8□□□□□ -0.84
KRT39-203ENST00000578078 MAGI1Q96QZ7 1491 aaPredicted RBP9.8□□□□□ -0.84
KRT39-203ENST00000578078 PLEKHG5O94827 1062 aa9.8□□□□□ -0.84
KRT39-203ENST00000578078 LRRIQ1Q96JM4 1722 aa9.8□□□□□ -0.84
KRT39-203ENST00000578078 GSE1Q14687 1217 aa9.79□□□□□ -0.84
KRT39-203ENST00000578078 UBE2Q2Q8WVN8 375 aa9.79□□□□□ -0.84
KRT39-203ENST00000578078 ATP1B4Q9UN42 357 aaPredicted RBP9.79□□□□□ -0.84
KRT39-203ENST00000578078 ZBTB12Q9Y330 459 aaPredicted RBP9.79□□□□□ -0.84
KRT39-203ENST00000578078 FANCIQ9NVI1 1328 aa9.79□□□□□ -0.84
KRT39-203ENST00000578078 ARID3AQ99856 593 aa9.78□□□□□ -0.84
KRT39-203ENST00000578078 WDR70Q9NW82 654 aa9.78□□□□□ -0.84
KRT39-203ENST00000578078 GRIN2AQ12879 1464 aa9.78□□□□□ -0.84
KRT39-203ENST00000578078 HECW1Q76N89 1606 aa9.78□□□□□ -0.84
KRT39-203ENST00000578078 UGGT2Q9NYU1 1516 aa9.78□□□□□ -0.84
KRT39-203ENST00000578078 CCDC18Q5T9S5 1454 aa9.76□□□□□ -0.85
KRT39-203ENST00000578078 C1orf115Q9H7X2 142 aa9.76□□□□□ -0.85
KRT39-203ENST00000578078 KIAA0586Q9BVV6 1533 aa9.76□□□□□ -0.85
KRT39-203ENST00000578078 SUPT6HQ7KZ85 1726 aaKnown RBP9.76□□□□□ -0.85
KRT39-203ENST00000578078 SYNJ2O15056 1496 aa9.75□□□□□ -0.85
KRT39-203ENST00000578078 ZBTB7CA1YPR0 619 aa9.75□□□□□ -0.85
KRT39-203ENST00000578078 VGFO15240 615 aaPredicted RBP9.75□□□□□ -0.85
KRT39-203ENST00000578078 ZNF692Q9BU19 519 aaPredicted RBP9.75□□□□□ -0.85
KRT39-203ENST00000578078 EHBP1L1Q8N3D4 1523 aa9.75□□□□□ -0.85
KRT39-203ENST00000578078 YTHDC1Q96MU7 727 aaKnown RBP9.74□□□□□ -0.85
KRT39-203ENST00000578078 KIAA0556O60303 1618 aa9.74□□□□□ -0.85
KRT39-203ENST00000578078 MTUS2Q5JR59 1369 aa9.73□□□□□ -0.85
KRT39-203ENST00000578078 PHLDB1Q86UU1 1377 aa9.73□□□□□ -0.85
KRT39-203ENST00000578078 CEP170Q5SW79 1584 aa9.71□□□□□ -0.85
KRT39-203ENST00000578078 ZMYND10O75800 440 aa9.71□□□□□ -0.86
KRT39-203ENST00000578078 PDIA4P13667 645 aaKnown RBP9.71□□□□□ -0.86
KRT39-203ENST00000578078 RBM19Q9Y4C8 960 aaKnown RBP9.71□□□□□ -0.86
KRT39-203ENST00000578078 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.7□□□□□ -0.86
KRT39-203ENST00000578078 CHMP7Q8WUX9 453 aaPredicted RBP9.7□□□□□ -0.86
KRT39-203ENST00000578078 SSUH2Q9Y2M2 353 aa9.7□□□□□ -0.86
KRT39-203ENST00000578078 DISP1Q96F81 1524 aa9.69□□□□□ -0.86
KRT39-203ENST00000578078 CADPS2Q86UW7 1296 aa9.69□□□□□ -0.86
KRT39-203ENST00000578078 SGIP1Q9BQI5 828 aa9.69□□□□□ -0.86
KRT39-203ENST00000578078 RAPGEF6Q8TEU7 1601 aa9.69□□□□□ -0.86
KRT39-203ENST00000578078 EPRSP07814 1512 aaKnown RBP9.69□□□□□ -0.86
KRT39-203ENST00000578078 NCOA2Q15596 1464 aa9.69□□□□□ -0.86
KRT39-203ENST00000578078 FGD6Q6ZV73 1430 aa9.68□□□□□ -0.86
KRT39-203ENST00000578078 ITGAEP38570 1179 aa9.68□□□□□ -0.86
KRT39-203ENST00000578078 FAM50AQ14320 339 aaKnown RBP9.68□□□□□ -0.86
KRT39-203ENST00000578078 ARHGEF1Q92888 912 aaKnown RBP9.68□□□□□ -0.86
KRT39-203ENST00000578078 BCL11BQ9C0K0 894 aaPredicted RBP9.67□□□□□ -0.86
KRT39-203ENST00000578078 NUP160Q12769 1436 aa9.67□□□□□ -0.86
KRT39-203ENST00000578078 DHX57Q6P158 1386 aaKnown RBP9.67□□□□□ -0.86
KRT39-203ENST00000578078 TESPA1A2RU30 521 aaPredicted RBP9.67□□□□□ -0.86
KRT39-203ENST00000578078 SPINK5Q9NQ38 1064 aaPredicted RBP9.67□□□□□ -0.86
KRT39-203ENST00000578078 STK24Q9Y6E0 443 aa9.67□□□□□ -0.86
KRT39-203ENST00000578078 MYOM3Q5VTT5 1437 aa9.66□□□□□ -0.86
KRT39-203ENST00000578078 ARHGEF11O15085 1522 aa9.65□□□□□ -0.86
KRT39-203ENST00000578078 MAGI3Q5TCQ9 1506 aa9.65□□□□□ -0.86
KRT39-203ENST00000578078 PTPN23Q9H3S7 1636 aa9.65□□□□□ -0.86
KRT39-203ENST00000578078 CARMIL2Q6F5E8 1435 aa9.65□□□□□ -0.86
KRT39-203ENST00000578078 SETD5Q9C0A6 1442 aa9.65□□□□□ -0.86
KRT39-203ENST00000578078 CHD1O14646 1710 aa9.65□□□□□ -0.86
KRT39-203ENST00000578078 NECTIN2Q92692 538 aa9.64□□□□□ -0.87
KRT39-203ENST00000578078 CDK13Q14004 1512 aaKnown RBP9.64□□□□□ -0.87
KRT39-203ENST00000578078 RAB3GAP2Q9H2M9 1393 aa9.63□□□□□ -0.87
KRT39-203ENST00000578078 SPDYE2BA6NHP3 402 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms