RNA–Protein interactions for RNA: ENST00000578026.5

GDPD1-202, Transcript of glycerophosphodiester phosphodiesterase domain containing 1, humanhuman

TSL 3

Gene GDPD1, Length 934 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD1-202ENST00000578026 SCAPERQ9BY12 1400 aa27.84■■■□□ 2.05
GDPD1-202ENST00000578026 CERKQ8TCT0 537 aa27.84■■■□□ 2.05
GDPD1-202ENST00000578026 PLCH2O75038 1416 aa27.83■■■□□ 2.05
GDPD1-202ENST00000578026 ARHGEF12Q9NZN5 1544 aa27.81■■■□□ 2.04
GDPD1-202ENST00000578026 ATP10AO60312 1499 aa27.76■■■□□ 2.04
GDPD1-202ENST00000578026 CEBPAP49715 358 aaPredicted RBP27.74■■■□□ 2.03
GDPD1-202ENST00000578026 C9orf84Q5VXU9 1444 aa27.74■■■□□ 2.03
GDPD1-202ENST00000578026 PREX1Q8TCU6 1659 aa27.71■■■□□ 2.03
GDPD1-202ENST00000578026 KIF14Q15058 1648 aa27.68■■■□□ 2.02
GDPD1-202ENST00000578026 MYO5CQ9NQX4 1742 aa27.68■■■□□ 2.02
GDPD1-202ENST00000578026 EFCAB2Q5VUJ9 269 aa27.67■■■□□ 2.02
GDPD1-202ENST00000578026 STRCQ7RTU9 1775 aa27.66■■■□□ 2.02
GDPD1-202ENST00000578026 AFAP1Q8N556 730 aa27.63■■■□□ 2.01
GDPD1-202ENST00000578026 KDM5CP41229 1560 aa27.63■■■□□ 2.01
GDPD1-202ENST00000578026 ATP1B4Q9UN42 357 aaPredicted RBP27.62■■■□□ 2.01
GDPD1-202ENST00000578026 ZNF518AQ6AHZ1 1483 aa27.62■■■□□ 2.01
GDPD1-202ENST00000578026 ARHGAP35Q9NRY4 1499 aa27.61■■■□□ 2.01
GDPD1-202ENST00000578026 DIP2CQ9Y2E4 1556 aa27.6■■■□□ 2.01
GDPD1-202ENST00000578026 FMN1Q68DA7 1419 aa27.59■■■□□ 2.01
GDPD1-202ENST00000578026 EHMT2Q96KQ7 1210 aa27.58■■■□□ 2.01
GDPD1-202ENST00000578026 TROQ12816 1431 aaPredicted RBP27.58■■■□□ 2
GDPD1-202ENST00000578026 ARHGAP5Q13017 1502 aa27.57■■■□□ 2
GDPD1-202ENST00000578026 ILDR2Q71H61 639 aa27.57■■■□□ 2
GDPD1-202ENST00000578026 UHRF1BP1Q6BDS2 1440 aa27.56■■■□□ 2
GDPD1-202ENST00000578026 ABCA6Q8N139 1617 aa27.54■■■□□ 2
GDPD1-202ENST00000578026 LRRIQ1Q96JM4 1722 aa27.54■■■□□ 2
GDPD1-202ENST00000578026 REREQ9P2R6 1566 aa27.52■■■□□ 2
GDPD1-202ENST00000578026 CDK11AQ9UQ88 783 aaPredicted RBP27.52■■■□□ 2
GDPD1-202ENST00000578026 SETD1BQ9UPS6 1966 aaKnown RBP27.51■■■□□ 2
GDPD1-202ENST00000578026 DISP3Q9P2K9 1392 aa27.51■■□□□ 1.99
GDPD1-202ENST00000578026 DMRT2Q9Y5R5 561 aa27.51■■□□□ 1.99
GDPD1-202ENST00000578026 C3P01024 1663 aa27.5■■□□□ 1.99
GDPD1-202ENST00000578026 CDC42BPBQ9Y5S2 1711 aa27.5■■□□□ 1.99
GDPD1-202ENST00000578026 UBTFP17480 764 aaKnown RBP27.49■■□□□ 1.99
GDPD1-202ENST00000578026 MLH3Q9UHC1 1453 aa27.48■■□□□ 1.99
GDPD1-202ENST00000578026 TRAPPC8Q9Y2L5 1435 aa27.48■■□□□ 1.99
GDPD1-202ENST00000578026 PTPRTO14522 1441 aa27.46■■□□□ 1.99
GDPD1-202ENST00000578026 CLIP1P30622 1438 aa27.45■■□□□ 1.98
GDPD1-202ENST00000578026 MYT1LQ9UL68 1186 aa27.45■■□□□ 1.98
GDPD1-202ENST00000578026 AGLP35573 1532 aa27.45■■□□□ 1.98
GDPD1-202ENST00000578026 ABCC1P33527 1531 aa27.44■■□□□ 1.98
GDPD1-202ENST00000578026 LTBP4Q8N2S1 1624 aa27.43■■□□□ 1.98
GDPD1-202ENST00000578026 PREX2Q70Z35 1606 aa27.41■■□□□ 1.98
GDPD1-202ENST00000578026 SOCS7O14512 581 aa27.39■■□□□ 1.98
GDPD1-202ENST00000578026 ITSN2Q9NZM3 1697 aa27.39■■□□□ 1.97
GDPD1-202ENST00000578026 KIDINS220Q9ULH0 1771 aa27.38■■□□□ 1.97
GDPD1-202ENST00000578026 NCOA1Q15788 1441 aa27.36■■□□□ 1.97
GDPD1-202ENST00000578026 SPATA31D1Q6ZQQ2 1576 aa27.35■■□□□ 1.97
GDPD1-202ENST00000578026 ESF1Q9H501 851 aaKnown RBP27.31■■□□□ 1.96
GDPD1-202ENST00000578026 CDC42BPAQ5VT25 1732 aa27.3■■□□□ 1.96
GDPD1-202ENST00000578026 CNTLNQ9NXG0 1405 aa27.3■■□□□ 1.96
GDPD1-202ENST00000578026 CASKIN1Q8WXD9 1431 aa27.29■■□□□ 1.96
GDPD1-202ENST00000578026 SAMD9LQ8IVG5 1584 aa27.28■■□□□ 1.96
GDPD1-202ENST00000578026 CAMSAP1Q5T5Y3 1602 aa27.27■■□□□ 1.96
GDPD1-202ENST00000578026 IQSEC2Q5JU85 1478 aa27.26■■□□□ 1.95
GDPD1-202ENST00000578026 CCDC18Q5T9S5 1454 aa27.26■■□□□ 1.95
GDPD1-202ENST00000578026 NPATQ14207 1427 aa27.24■■□□□ 1.95
GDPD1-202ENST00000578026 MROH2AA6NES4 1674 aa27.23■■□□□ 1.95
GDPD1-202ENST00000578026 ZMYM3Q14202 1370 aa27.22■■□□□ 1.95
GDPD1-202ENST00000578026 SYCP2Q9BX26 1530 aa27.21■■□□□ 1.95
GDPD1-202ENST00000578026 NCKAP5LQ9HCH0 1330 aa27.19■■□□□ 1.94
GDPD1-202ENST00000578026 ZNF335Q9H4Z2 1342 aaPredicted RBP27.18■■□□□ 1.94
GDPD1-202ENST00000578026 ZNF777Q9ULD5 760 aaPredicted RBP27.18■■□□□ 1.94
GDPD1-202ENST00000578026 SUPT6HQ7KZ85 1726 aaKnown RBP27.18■■□□□ 1.94
GDPD1-202ENST00000578026 GPATCH8Q9UKJ3 1502 aaKnown RBP27.17■■□□□ 1.94
GDPD1-202ENST00000578026 HNRNPMP52272 730 aaKnown RBP eCLIP27.16■■□□□ 1.94
GDPD1-202ENST00000578026 CHIC1Q5VXU3 224 aa27.16■■□□□ 1.94
GDPD1-202ENST00000578026 PLXNC1O60486 1568 aa27.15■■□□□ 1.94
GDPD1-202ENST00000578026 SPAG9O60271 1321 aaKnown RBP27.15■■□□□ 1.94
GDPD1-202ENST00000578026 CLTCQ00610 1675 aaKnown RBP27.14■■□□□ 1.93
GDPD1-202ENST00000578026 FYCO1Q9BQS8 1478 aa27.13■■□□□ 1.93
GDPD1-202ENST00000578026 MYO3AQ8NEV4 1616 aa27.13■■□□□ 1.93
GDPD1-202ENST00000578026 ATP7AQ04656 1500 aa27.13■■□□□ 1.93
GDPD1-202ENST00000578026 ZNF142P52746 1687 aaPredicted RBP27.13■■□□□ 1.93
GDPD1-202ENST00000578026 INO80Q9ULG1 1556 aaPredicted RBP27.13■■□□□ 1.93
GDPD1-202ENST00000578026 PTPRKQ15262 1439 aa27.12■■□□□ 1.93
GDPD1-202ENST00000578026 PLA2R1Q13018 1463 aa27.1■■□□□ 1.93
GDPD1-202ENST00000578026 TCOF1Q13428 1488 aaKnown RBP27.1■■□□□ 1.93
GDPD1-202ENST00000578026 CEP170BQ9Y4F5 1589 aaPredicted RBP27.09■■□□□ 1.93
GDPD1-202ENST00000578026 A2MP01023 1474 aa27.09■■□□□ 1.93
GDPD1-202ENST00000578026 KIAA1107Q9UPP5 1409 aa27.07■■□□□ 1.92
GDPD1-202ENST00000578026 UBAP1LF5GYI3 381 aa27.07■■□□□ 1.92
GDPD1-202ENST00000578026 PKD2Q13563 968 aa27.04■■□□□ 1.92
GDPD1-202ENST00000578026 GGT6Q6P531 493 aa27.02■■□□□ 1.92
GDPD1-202ENST00000578026 CFDP1Q9UEE9 299 aaPredicted RBP27.02■■□□□ 1.92
GDPD1-202ENST00000578026 PLEKHH2Q8IVE3 1493 aa27.01■■□□□ 1.91
GDPD1-202ENST00000578026 CCNB3Q8WWL7 1395 aa26.97■■□□□ 1.91
GDPD1-202ENST00000578026 ZNF644Q9H582 1327 aaPredicted RBP26.97■■□□□ 1.91
GDPD1-202ENST00000578026 PPP6R1Q9UPN7 881 aa26.96■■□□□ 1.91
GDPD1-202ENST00000578026 A2ML1A8K2U0 1454 aa26.95■■□□□ 1.91
GDPD1-202ENST00000578026 ADGBQ8N7X0 1667 aa26.95■■□□□ 1.9
GDPD1-202ENST00000578026 DNMT1P26358 1616 aaKnown RBP26.94■■□□□ 1.9
GDPD1-202ENST00000578026 MBD5Q9P267 1494 aa26.93■■□□□ 1.9
GDPD1-202ENST00000578026 TIAM1Q13009 1591 aa26.91■■□□□ 1.9
GDPD1-202ENST00000578026 NEURL4Q96JN8 1562 aa26.9■■□□□ 1.9
GDPD1-202ENST00000578026 MTUS2Q5JR59 1369 aa26.88■■□□□ 1.89
GDPD1-202ENST00000578026 HSPA1LP34931 641 aa26.87■■□□□ 1.89
GDPD1-202ENST00000578026 FBXO31Q5XUX0 539 aaPredicted RBP26.87■■□□□ 1.89
GDPD1-202ENST00000578026 DHX29Q7Z478 1369 aaKnown RBP26.84■■□□□ 1.89
GDPD1-202ENST00000578026 RTEL1-TNFRSF6BF6WH68 1400 aa26.84■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms