RNA–Protein interactions for RNA: ENST00000577255.1

KCTD1-204, Transcript of potassium channel tetramerization domain containing 1, humanhuman

TSL 2

Gene KCTD1, Length 4,590 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD1-204ENST00000577255 AAMPQ13685 434 aa12.51□□□□□ -0.41
KCTD1-204ENST00000577255 CFTRP13569 1480 aa12.5□□□□□ -0.41
KCTD1-204ENST00000577255 CHMP4AQ9BY43 222 aa12.49□□□□□ -0.41
KCTD1-204ENST00000577255 PRXQ9BXM0 1461 aa12.49□□□□□ -0.41
KCTD1-204ENST00000577255 KDM2AQ9Y2K7 1162 aa12.49□□□□□ -0.41
KCTD1-204ENST00000577255 CHMP4BQ9H444 224 aaKnown RBP12.49□□□□□ -0.41
KCTD1-204ENST00000577255 FAM9BQ8IZU0 186 aa12.48□□□□□ -0.41
KCTD1-204ENST00000577255 TOP2BQ02880 1626 aa12.48□□□□□ -0.41
KCTD1-204ENST00000577255 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.47□□□□□ -0.41
KCTD1-204ENST00000577255 HNRNPUQ00839 825 aaKnown RBP eCLIP12.46□□□□□ -0.41
KCTD1-204ENST00000577255 BRPF3Q9ULD4 1205 aa12.45□□□□□ -0.42
KCTD1-204ENST00000577255 SETD5Q9C0A6 1442 aa12.44□□□□□ -0.42
KCTD1-204ENST00000577255 CC2D2AQ9P2K1 1620 aa12.44□□□□□ -0.42
KCTD1-204ENST00000577255 L1TD1Q5T7N2 865 aaKnown RBP12.44□□□□□ -0.42
KCTD1-204ENST00000577255 SLC4A1APQ9BWU0 796 aaKnown RBP12.43□□□□□ -0.42
KCTD1-204ENST00000577255 ZNF644Q9H582 1327 aaPredicted RBP12.42□□□□□ -0.42
KCTD1-204ENST00000577255 DDRGK1Q96HY6 314 aa12.42□□□□□ -0.42
KCTD1-204ENST00000577255 AQRO60306 1485 aaKnown RBP eCLIP12.42□□□□□ -0.42
KCTD1-204ENST00000577255 GSE1Q14687 1217 aa12.41□□□□□ -0.42
KCTD1-204ENST00000577255 PLCD3Q8N3E9 789 aa12.4□□□□□ -0.42
KCTD1-204ENST00000577255 HSP90B1P14625 803 aaKnown RBP12.4□□□□□ -0.43
KCTD1-204ENST00000577255 PDS5BQ9NTI5 1447 aa12.4□□□□□ -0.43
KCTD1-204ENST00000577255 PEG3Q9GZU2 1588 aa12.39□□□□□ -0.43
KCTD1-204ENST00000577255 RGL3Q3MIN7 710 aa12.39□□□□□ -0.43
KCTD1-204ENST00000577255 FHAD1B1AJZ9 1412 aa12.39□□□□□ -0.43
KCTD1-204ENST00000577255 PTMAP06454 111 aaKnown RBP12.37□□□□□ -0.43
KCTD1-204ENST00000577255 IPO9Q96P70 1041 aaKnown RBP12.37□□□□□ -0.43
KCTD1-204ENST00000577255 CCDC9Q9Y3X0 531 aaKnown RBP12.37□□□□□ -0.43
KCTD1-204ENST00000577255 CFDP1Q9UEE9 299 aaPredicted RBP12.37□□□□□ -0.43
KCTD1-204ENST00000577255 FAM43AQ8N2R8 423 aa12.36□□□□□ -0.43
KCTD1-204ENST00000577255 POLA1P09884 1462 aaPredicted RBP12.36□□□□□ -0.43
KCTD1-204ENST00000577255 PPP1R15AO75807 674 aaPredicted RBP12.35□□□□□ -0.43
KCTD1-204ENST00000577255 ZNF526Q8TF50 670 aaPredicted RBP12.34□□□□□ -0.43
KCTD1-204ENST00000577255 ERCC6Q03468 1493 aa12.34□□□□□ -0.43
KCTD1-204ENST00000577255 MSH5O43196 834 aa12.33□□□□□ -0.44
KCTD1-204ENST00000577255 TPRNQ4KMQ1 711 aa12.33□□□□□ -0.44
KCTD1-204ENST00000577255 WWC1Q8IX03 1113 aa12.33□□□□□ -0.44
KCTD1-204ENST00000577255 LRRC9Q6ZRR7 1453 aa12.33□□□□□ -0.44
KCTD1-204ENST00000577255 MAPK8IP2Q13387 824 aaPredicted RBP12.33□□□□□ -0.44
KCTD1-204ENST00000577255 HMGXB3Q12766 1538 aa12.33□□□□□ -0.44
KCTD1-204ENST00000577255 HSPA5P11021 654 aaKnown RBP12.32□□□□□ -0.44
KCTD1-204ENST00000577255 RGS3P49796 1198 aa12.32□□□□□ -0.44
KCTD1-204ENST00000577255 MRS2Q9HD23 443 aa12.32□□□□□ -0.44
KCTD1-204ENST00000577255 PPP4R2Q9NY27 417 aa12.32□□□□□ -0.44
KCTD1-204ENST00000577255 TOPBP1Q92547 1522 aa12.31□□□□□ -0.44
KCTD1-204ENST00000577255 L3MBTL2Q969R5 705 aa12.31□□□□□ -0.44
KCTD1-204ENST00000577255 GAPVD1Q14C86 1478 aa12.31□□□□□ -0.44
KCTD1-204ENST00000577255 ERICH3Q5RHP9 1530 aa12.3□□□□□ -0.44
KCTD1-204ENST00000577255 EIF4G2P78344 907 aaKnown RBP eCLIP12.3□□□□□ -0.44
KCTD1-204ENST00000577255 FAM13BQ9NYF5 915 aa12.3□□□□□ -0.44
KCTD1-204ENST00000577255 MPHOSPH9Q99550 1183 aa12.29□□□□□ -0.44
KCTD1-204ENST00000577255 AEBP1Q8IUX7 1158 aa12.29□□□□□ -0.44
KCTD1-204ENST00000577255 MSNP26038 577 aaKnown RBP12.28□□□□□ -0.44
KCTD1-204ENST00000577255 RRBP1Q9P2E9 1410 aaKnown RBP12.28□□□□□ -0.44
KCTD1-204ENST00000577255 MAP7D2Q96T17 732 aa12.28□□□□□ -0.44
KCTD1-204ENST00000577255 IRX3P78415 501 aaPredicted RBP12.27□□□□□ -0.44
KCTD1-204ENST00000577255 HMGB1P09429 215 aaKnown RBP12.27□□□□□ -0.45
KCTD1-204ENST00000577255 FMN1Q68DA7 1419 aa12.26□□□□□ -0.45
KCTD1-204ENST00000577255 PLEKHD1A6NEE1 506 aa12.26□□□□□ -0.45
KCTD1-204ENST00000577255 HNRNPMP52272 730 aaKnown RBP eCLIP12.25□□□□□ -0.45
KCTD1-204ENST00000577255 TSPY4P0CV99 314 aa12.25□□□□□ -0.45
KCTD1-204ENST00000577255 TSPY10P0CW01 314 aa12.25□□□□□ -0.45
KCTD1-204ENST00000577255 FTSJ3Q8IY81 847 aaKnown RBP12.24□□□□□ -0.45
KCTD1-204ENST00000577255 PKD2Q13563 968 aa12.24□□□□□ -0.45
KCTD1-204ENST00000577255 ZHX1Q9UKY1 873 aaPredicted RBP12.24□□□□□ -0.45
KCTD1-204ENST00000577255 IPO4Q8TEX9 1081 aaKnown RBP12.23□□□□□ -0.45
KCTD1-204ENST00000577255 FGD6Q6ZV73 1430 aa12.23□□□□□ -0.45
KCTD1-204ENST00000577255 B4GALNT3Q6L9W6 998 aa12.23□□□□□ -0.45
KCTD1-204ENST00000577255 BIVM-ERCC5R4GMW8 1640 aa12.23□□□□□ -0.45
KCTD1-204ENST00000577255 E9PSI1 815 aa12.23□□□□□ -0.45
KCTD1-204ENST00000577255 PCF11O94913 1555 aaKnown RBP12.22□□□□□ -0.45
KCTD1-204ENST00000577255 CCDC18Q5T9S5 1454 aa12.22□□□□□ -0.45
KCTD1-204ENST00000577255 ZNF771Q7L3S4 317 aaPredicted RBP12.22□□□□□ -0.45
KCTD1-204ENST00000577255 WDR97A6NE52 1622 aa12.22□□□□□ -0.45
KCTD1-204ENST00000577255 URB2Q14146 1524 aaKnown RBP12.22□□□□□ -0.45
KCTD1-204ENST00000577255 CHGAP10645 457 aaKnown RBP12.21□□□□□ -0.45
KCTD1-204ENST00000577255 JPH4Q96JJ6 628 aa12.21□□□□□ -0.45
KCTD1-204ENST00000577255 BCCIPQ9P287 314 aaKnown RBP eCLIP12.21□□□□□ -0.45
KCTD1-204ENST00000577255 TIAM1Q13009 1591 aa12.21□□□□□ -0.45
KCTD1-204ENST00000577255 CCDC184Q52MB2 194 aa12.21□□□□□ -0.46
KCTD1-204ENST00000577255 CC2D1BQ5T0F9 858 aaKnown RBP12.21□□□□□ -0.46
KCTD1-204ENST00000577255 CALRP27797 417 aaKnown RBP12.2□□□□□ -0.46
KCTD1-204ENST00000577255 PDCL3Q9H2J4 239 aa12.2□□□□□ -0.46
KCTD1-204ENST00000577255 TPM2P07951 284 aa12.2□□□□□ -0.46
KCTD1-204ENST00000577255 DCAF11Q8TEB1 546 aa12.2□□□□□ -0.46
KCTD1-204ENST00000577255 NCOA2Q15596 1464 aa12.19□□□□□ -0.46
KCTD1-204ENST00000577255 CDK13Q14004 1512 aaKnown RBP12.18□□□□□ -0.46
KCTD1-204ENST00000577255 PTPRKQ15262 1439 aa12.18□□□□□ -0.46
KCTD1-204ENST00000577255 FAM193AP78312 1265 aa12.18□□□□□ -0.46
KCTD1-204ENST00000577255 MTERF4Q7Z6M4 381 aaKnown RBP12.17□□□□□ -0.46
KCTD1-204ENST00000577255 CARD11Q9BXL7 1154 aa12.17□□□□□ -0.46
KCTD1-204ENST00000577255 ZNF608Q9ULD9 1512 aaPredicted RBP12.17□□□□□ -0.46
KCTD1-204ENST00000577255 CFAP44Q96MT7 982 aa12.16□□□□□ -0.46
KCTD1-204ENST00000577255 MYH16Q9H6N6 1097 aa12.16□□□□□ -0.46
KCTD1-204ENST00000577255 CASKIN1Q8WXD9 1431 aa12.16□□□□□ -0.46
KCTD1-204ENST00000577255 ZFP91Q96JP5 570 aaPredicted RBP12.16□□□□□ -0.46
KCTD1-204ENST00000577255 GOLGA6L3A6NEY3 463 aa12.16□□□□□ -0.46
KCTD1-204ENST00000577255 PAK3O75914 559 aaPredicted RBP12.16□□□□□ -0.46
KCTD1-204ENST00000577255 TAF3Q5VWG9 929 aa12.16□□□□□ -0.46
KCTD1-204ENST00000577255 VGLL3A8MV65 326 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms