RNA–Protein interactions for RNA: ENST00000577255.1

KCTD1-204, Transcript of potassium channel tetramerization domain containing 1, humanhuman

TSL 2

Gene KCTD1, Length 4,590 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD1-204ENST00000577255 NISCHQ9Y2I1 1504 aa17.25■□□□□ 0.35
KCTD1-204ENST00000577255 PELP1Q8IZL8 1130 aaKnown RBP16.77■□□□□ 0.27
KCTD1-204ENST00000577255 MYT1Q01538 1121 aa16.75■□□□□ 0.27
KCTD1-204ENST00000577255 DCAF8L2P0C7V8 631 aa16.11■□□□□ 0.17
KCTD1-204ENST00000577255 SHROOM4Q9ULL8 1493 aa16■□□□□ 0.15
KCTD1-204ENST00000577255 SUPT5HO00267 1087 aaKnown RBP15.77■□□□□ 0.11
KCTD1-204ENST00000577255 TTBK1Q5TCY1 1321 aaPredicted RBP15.7■□□□□ 0.1
KCTD1-204ENST00000577255 ERICH6Q7L0X2 663 aa15.53■□□□□ 0.08
KCTD1-204ENST00000577255 EHMT2Q96KQ7 1210 aa15.12■□□□□ 0.01
KCTD1-204ENST00000577255 CENPBP07199 599 aaPredicted RBP15□□□□□ -0.01
KCTD1-204ENST00000577255 SLC24A1O60721 1099 aa14.91□□□□□ -0.02
KCTD1-204ENST00000577255 FAM9AQ8IZU1 332 aaPredicted RBP14.79□□□□□ -0.04
KCTD1-204ENST00000577255 HRCP23327 699 aa14.74□□□□□ -0.05
KCTD1-204ENST00000577255 PRKCSHP14314 528 aaPredicted RBP14.7□□□□□ -0.06
KCTD1-204ENST00000577255 BCL11AQ9H165 835 aa14.7□□□□□ -0.06
KCTD1-204ENST00000577255 PCGF6Q9BYE7 350 aa14.67□□□□□ -0.06
KCTD1-204ENST00000577255 LOC105371045A0A1W2PR82 267 aa14.65□□□□□ -0.07
KCTD1-204ENST00000577255 CHIC1Q5VXU3 224 aa14.63□□□□□ -0.07
KCTD1-204ENST00000577255 PPARGC1BQ86YN6 1023 aaKnown RBP14.48□□□□□ -0.09
KCTD1-204ENST00000577255 ZCCHC6Q5VYS8 1495 aaKnown RBP14.43□□□□□ -0.1
KCTD1-204ENST00000577255 ABCC9O60706 1549 aa14.43□□□□□ -0.1
KCTD1-204ENST00000577255 EIF5BO60841 1220 aaKnown RBP14.42□□□□□ -0.1
KCTD1-204ENST00000577255 TRIM41Q8WV44 630 aa14.38□□□□□ -0.11
KCTD1-204ENST00000577255 CCER1Q8TC90 406 aaPredicted RBP14.34□□□□□ -0.11
KCTD1-204ENST00000577255 SCAF1Q9H7N4 1312 aaKnown RBP14.32□□□□□ -0.12
KCTD1-204ENST00000577255 GTF3C3Q9Y5Q9 886 aa14.31□□□□□ -0.12
KCTD1-204ENST00000577255 MYO15BQ96JP2 1530 aa14.31□□□□□ -0.12
KCTD1-204ENST00000577255 ZEB1P37275 1124 aaPredicted RBP14.29□□□□□ -0.12
KCTD1-204ENST00000577255 RANGAP1P46060 587 aaPredicted RBP14.25□□□□□ -0.13
KCTD1-204ENST00000577255 PABPN1Q86U42 306 aaKnown RBP eCLIP14.19□□□□□ -0.14
KCTD1-204ENST00000577255 YTHDC1Q96MU7 727 aaKnown RBP14.15□□□□□ -0.14
KCTD1-204ENST00000577255 SCRIBQ14160 1630 aa14.14□□□□□ -0.15
KCTD1-204ENST00000577255 CCDC180Q9P1Z9 1646 aa14.12□□□□□ -0.15
KCTD1-204ENST00000577255 ACIN1Q9UKV3 1341 aaKnown RBP14.12□□□□□ -0.15
KCTD1-204ENST00000577255 GLIPR1L2Q4G1C9 344 aa14.08□□□□□ -0.16
KCTD1-204ENST00000577255 ANP32EQ9BTT0 268 aa14.07□□□□□ -0.16
KCTD1-204ENST00000577255 APLP2Q06481 763 aa14.06□□□□□ -0.16
KCTD1-204ENST00000577255 DAXXQ9UER7 740 aaPredicted RBP14.06□□□□□ -0.16
KCTD1-204ENST00000577255 UBTFP17480 764 aaKnown RBP13.94□□□□□ -0.18
KCTD1-204ENST00000577255 TRIM26Q12899 539 aaPredicted RBP13.91□□□□□ -0.18
KCTD1-204ENST00000577255 RTL5Q5HYW3 569 aaPredicted RBP13.88□□□□□ -0.19
KCTD1-204ENST00000577255 PODXL2Q9NZ53 605 aa13.87□□□□□ -0.19
KCTD1-204ENST00000577255 RSF1Q96T23 1441 aaPredicted RBP13.86□□□□□ -0.19
KCTD1-204ENST00000577255 CECR2Q9BXF3 1484 aa13.84□□□□□ -0.19
KCTD1-204ENST00000577255 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.84□□□□□ -0.19
KCTD1-204ENST00000577255 NEFLP07196 543 aa13.83□□□□□ -0.19
KCTD1-204ENST00000577255 NEUROD1Q13562 356 aa13.81□□□□□ -0.2
KCTD1-204ENST00000577255 MYT1LQ9UL68 1186 aa13.8□□□□□ -0.2
KCTD1-204ENST00000577255 CSRNP3Q8WYN3 585 aa13.73□□□□□ -0.21
KCTD1-204ENST00000577255 HNRNPUL2Q1KMD3 747 aaKnown RBP13.68□□□□□ -0.22
KCTD1-204ENST00000577255 RB1CC1Q8TDY2 1594 aa13.68□□□□□ -0.22
KCTD1-204ENST00000577255 PKNOX2Q96KN3 472 aa13.66□□□□□ -0.22
KCTD1-204ENST00000577255 DIEXFQ68CQ4 756 aaKnown RBP13.65□□□□□ -0.22
KCTD1-204ENST00000577255 CLSPNQ9HAW4 1339 aa13.64□□□□□ -0.23
KCTD1-204ENST00000577255 ATP1B4Q9UN42 357 aaPredicted RBP13.64□□□□□ -0.23
KCTD1-204ENST00000577255 CCDC136Q96JN2 1154 aa13.61□□□□□ -0.23
KCTD1-204ENST00000577255 MROH2BQ7Z745 1585 aa13.61□□□□□ -0.23
KCTD1-204ENST00000577255 ITGAEP38570 1179 aa13.59□□□□□ -0.23
KCTD1-204ENST00000577255 DCAF1Q9Y4B6 1507 aa13.59□□□□□ -0.23
KCTD1-204ENST00000577255 ANO8Q9HCE9 1232 aaPredicted RBP13.59□□□□□ -0.23
KCTD1-204ENST00000577255 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.55□□□□□ -0.24
KCTD1-204ENST00000577255 RTN4Q9NQC3 1192 aaKnown RBP13.51□□□□□ -0.25
KCTD1-204ENST00000577255 PLEKHG5O94827 1062 aa13.49□□□□□ -0.25
KCTD1-204ENST00000577255 WIZO95785 1651 aa13.49□□□□□ -0.25
KCTD1-204ENST00000577255 BCANQ96GW7 911 aa13.48□□□□□ -0.25
KCTD1-204ENST00000577255 A0A0U1RQG5 324 aaPredicted RBP13.47□□□□□ -0.25
KCTD1-204ENST00000577255 ABCC8Q09428 1581 aa13.45□□□□□ -0.26
KCTD1-204ENST00000577255 UBE2Q2Q8WVN8 375 aa13.41□□□□□ -0.26
KCTD1-204ENST00000577255 NACADO15069 1562 aa13.41□□□□□ -0.26
KCTD1-204ENST00000577255 SOGA1O94964 1423 aa13.41□□□□□ -0.26
KCTD1-204ENST00000577255 ZNF316A6NFI3 1004 aaPredicted RBP13.39□□□□□ -0.27
KCTD1-204ENST00000577255 ERICH6BQ5W0A0 696 aa13.39□□□□□ -0.27
KCTD1-204ENST00000577255 DEKP35659 375 aaKnown RBP13.38□□□□□ -0.27
KCTD1-204ENST00000577255 P3H3Q8IVL6 736 aa13.37□□□□□ -0.27
KCTD1-204ENST00000577255 NBR1Q14596 966 aa13.37□□□□□ -0.27
KCTD1-204ENST00000577255 CCDC88BA6NC98 1476 aa13.37□□□□□ -0.27
KCTD1-204ENST00000577255 VSIG10Q8N0Z9 540 aa13.34□□□□□ -0.27
KCTD1-204ENST00000577255 PDE4CQ08493 712 aa13.33□□□□□ -0.28
KCTD1-204ENST00000577255 CDK11AQ9UQ88 783 aaPredicted RBP13.32□□□□□ -0.28
KCTD1-204ENST00000577255 RUSC2Q8N2Y8 1516 aa13.31□□□□□ -0.28
KCTD1-204ENST00000577255 SALL2Q9Y467 1007 aaPredicted RBP13.27□□□□□ -0.28
KCTD1-204ENST00000577255 ARID3CA6NKF2 412 aa13.26□□□□□ -0.29
KCTD1-204ENST00000577255 CEP162Q5TB80 1403 aa13.25□□□□□ -0.29
KCTD1-204ENST00000577255 BAZ1AQ9NRL2 1556 aaPredicted RBP13.25□□□□□ -0.29
KCTD1-204ENST00000577255 POLR3GLQ9BT43 218 aa13.24□□□□□ -0.29
KCTD1-204ENST00000577255 WRNQ14191 1432 aaPredicted RBP eCLIP13.19□□□□□ -0.3
KCTD1-204ENST00000577255 FAM50AQ14320 339 aaKnown RBP13.17□□□□□ -0.3
KCTD1-204ENST00000577255 PDIA4P13667 645 aaKnown RBP13.16□□□□□ -0.3
KCTD1-204ENST00000577255 ZNF326Q5BKZ1 582 aaKnown RBP13.15□□□□□ -0.31
KCTD1-204ENST00000577255 CNGB1Q14028 1251 aaPredicted RBP13.12□□□□□ -0.31
KCTD1-204ENST00000577255 BAZ1BQ9UIG0 1483 aaKnown RBP13.12□□□□□ -0.31
KCTD1-204ENST00000577255 ANP32AP39687 249 aaKnown RBP13.11□□□□□ -0.31
KCTD1-204ENST00000577255 CLIP1P30622 1438 aa13.1□□□□□ -0.31
KCTD1-204ENST00000577255 TSHZ2Q9NRE2 1034 aa13.1□□□□□ -0.31
KCTD1-204ENST00000577255 CDK11BP21127 795 aaKnown RBP13.08□□□□□ -0.31
KCTD1-204ENST00000577255 SMARCA4P51532 1647 aa13.08□□□□□ -0.32
KCTD1-204ENST00000577255 FKBP8Q14318 412 aa13.07□□□□□ -0.32
KCTD1-204ENST00000577255 NCLP19338 710 aaKnown RBP13.06□□□□□ -0.32
KCTD1-204ENST00000577255 TNNT2P45379 298 aaPredicted RBP13.06□□□□□ -0.32
KCTD1-204ENST00000577255 TIMELESSQ9UNS1 1208 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms