RNA–Protein interactions for RNA: ENST00000576359.1

RAB40B-211, Transcript of RAB40B, member RAS oncogene family, humanhuman

Gene RAB40B, Length 2,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-211ENST00000576359 KDM5BQ9UGL1 1544 aa20.13■□□□□ 0.81
RAB40B-211ENST00000576359 KIF14Q15058 1648 aa20.13■□□□□ 0.81
RAB40B-211ENST00000576359 ADCY10Q96PN6 1610 aa20.12■□□□□ 0.81
RAB40B-211ENST00000576359 ROCK1Q13464 1354 aa20.11■□□□□ 0.81
RAB40B-211ENST00000576359 ABCA8O94911 1581 aa20.1■□□□□ 0.81
RAB40B-211ENST00000576359 ITSN2Q9NZM3 1697 aa20.08■□□□□ 0.81
RAB40B-211ENST00000576359 TRIM52Q96A61 297 aa20.08■□□□□ 0.81
RAB40B-211ENST00000576359 GPATCH8Q9UKJ3 1502 aaKnown RBP20.07■□□□□ 0.8
RAB40B-211ENST00000576359 HIRIP3Q9BW71 556 aaPredicted RBP20.07■□□□□ 0.8
RAB40B-211ENST00000576359 CAMSAP2Q08AD1 1489 aa20.07■□□□□ 0.8
RAB40B-211ENST00000576359 MPHOSPH9Q99550 1183 aa20.04■□□□□ 0.8
RAB40B-211ENST00000576359 DDX10Q13206 875 aaKnown RBP20.04■□□□□ 0.8
RAB40B-211ENST00000576359 ATP10BO94823 1461 aa20.03■□□□□ 0.8
RAB40B-211ENST00000576359 CFDP1Q9UEE9 299 aaPredicted RBP20.02■□□□□ 0.8
RAB40B-211ENST00000576359 CHD1O14646 1710 aa20■□□□□ 0.79
RAB40B-211ENST00000576359 CROCC2H7BZ55 1655 aa20■□□□□ 0.79
RAB40B-211ENST00000576359 FOXD1Q16676 465 aa19.99■□□□□ 0.79
RAB40B-211ENST00000576359 CDC42BPAQ5VT25 1732 aa19.99■□□□□ 0.79
RAB40B-211ENST00000576359 ADGBQ8N7X0 1667 aa19.99■□□□□ 0.79
RAB40B-211ENST00000576359 MYT1Q01538 1121 aa19.99■□□□□ 0.79
RAB40B-211ENST00000576359 AEBP2Q6ZN18 517 aaPredicted RBP19.99■□□□□ 0.79
RAB40B-211ENST00000576359 ABCC10Q5T3U5 1492 aa19.98■□□□□ 0.79
RAB40B-211ENST00000576359 KCNH8Q96L42 1107 aa19.97■□□□□ 0.79
RAB40B-211ENST00000576359 NCOA1Q15788 1441 aa19.96■□□□□ 0.79
RAB40B-211ENST00000576359 ZNF777Q9ULD5 760 aaPredicted RBP19.95■□□□□ 0.78
RAB40B-211ENST00000576359 ADGRL2O95490 1459 aa19.95■□□□□ 0.78
RAB40B-211ENST00000576359 PLEKHD1A6NEE1 506 aa19.95■□□□□ 0.78
RAB40B-211ENST00000576359 ANKRD30BQ9BXX2 1392 aa19.94■□□□□ 0.78
RAB40B-211ENST00000576359 PTPRGP23470 1445 aa19.93■□□□□ 0.78
RAB40B-211ENST00000576359 PZPP20742 1482 aa19.91■□□□□ 0.78
RAB40B-211ENST00000576359 SHROOM2Q13796 1616 aa19.9■□□□□ 0.78
RAB40B-211ENST00000576359 RPRD2Q5VT52 1461 aaKnown RBP19.9■□□□□ 0.78
RAB40B-211ENST00000576359 L3MBTL2Q969R5 705 aa19.89■□□□□ 0.77
RAB40B-211ENST00000576359 SLC4A1APQ9BWU0 796 aaKnown RBP19.88■□□□□ 0.77
RAB40B-211ENST00000576359 TEX14Q8IWB6 1497 aa19.87■□□□□ 0.77
RAB40B-211ENST00000576359 ANKRD30AQ9BXX3 1397 aa19.85■□□□□ 0.77
RAB40B-211ENST00000576359 SHANK2Q9UPX8 1470 aa19.85■□□□□ 0.77
RAB40B-211ENST00000576359 ERCC6L2Q5T890 1561 aa19.84■□□□□ 0.77
RAB40B-211ENST00000576359 HSPA5P11021 654 aaKnown RBP19.83■□□□□ 0.76
RAB40B-211ENST00000576359 C9orf84Q5VXU9 1444 aa19.82■□□□□ 0.76
RAB40B-211ENST00000576359 ANKRD50Q9ULJ7 1429 aa19.81■□□□□ 0.76
RAB40B-211ENST00000576359 CDC42BPBQ9Y5S2 1711 aa19.81■□□□□ 0.76
RAB40B-211ENST00000576359 PREX2Q70Z35 1606 aa19.8■□□□□ 0.76
RAB40B-211ENST00000576359 NBPF8Q3BBV2 869 aa19.79■□□□□ 0.76
RAB40B-211ENST00000576359 SAMD9LQ8IVG5 1584 aa19.79■□□□□ 0.76
RAB40B-211ENST00000576359 MBD5Q9P267 1494 aa19.79■□□□□ 0.76
RAB40B-211ENST00000576359 ARHGEF5Q12774 1597 aa19.79■□□□□ 0.76
RAB40B-211ENST00000576359 KIAA1107Q9UPP5 1409 aa19.78■□□□□ 0.76
RAB40B-211ENST00000576359 ANP32CO43423 234 aa19.78■□□□□ 0.76
RAB40B-211ENST00000576359 WASHC2AQ641Q2 1341 aa19.78■□□□□ 0.76
RAB40B-211ENST00000576359 CCER2I3L3R5 266 aa19.76■□□□□ 0.75
RAB40B-211ENST00000576359 HNRNPMP52272 730 aaKnown RBP eCLIP19.76■□□□□ 0.75
RAB40B-211ENST00000576359 EIF4G2P78344 907 aaKnown RBP eCLIP19.76■□□□□ 0.75
RAB40B-211ENST00000576359 TTC37Q6PGP7 1564 aa19.75■□□□□ 0.75
RAB40B-211ENST00000576359 ABCC2Q92887 1545 aa19.75■□□□□ 0.75
RAB40B-211ENST00000576359 SUPT16HQ9Y5B9 1047 aaKnown RBP19.75■□□□□ 0.75
RAB40B-211ENST00000576359 PKD2Q13563 968 aa19.73■□□□□ 0.75
RAB40B-211ENST00000576359 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.73■□□□□ 0.75
RAB40B-211ENST00000576359 TSPY4P0CV99 314 aa19.72■□□□□ 0.75
RAB40B-211ENST00000576359 TSPY10P0CW01 314 aa19.72■□□□□ 0.75
RAB40B-211ENST00000576359 CLASP1Q7Z460 1538 aa19.72■□□□□ 0.75
RAB40B-211ENST00000576359 KDM5DQ9BY66 1539 aa19.72■□□□□ 0.75
RAB40B-211ENST00000576359 KIF15Q9NS87 1388 aa19.72■□□□□ 0.75
RAB40B-211ENST00000576359 CCDC141Q6ZP82 1450 aa19.72■□□□□ 0.75
RAB40B-211ENST00000576359 NUP155O75694 1391 aa19.7■□□□□ 0.74
RAB40B-211ENST00000576359 C11orf95C9JLR9 678 aaPredicted RBP19.69■□□□□ 0.74
RAB40B-211ENST00000576359 SYCP2Q9BX26 1530 aa19.69■□□□□ 0.74
RAB40B-211ENST00000576359 SPATA31E1Q6ZUB1 1445 aa19.68■□□□□ 0.74
RAB40B-211ENST00000576359 ARHGAP5Q13017 1502 aa19.67■□□□□ 0.74
RAB40B-211ENST00000576359 MYO5CQ9NQX4 1742 aa19.65■□□□□ 0.74
RAB40B-211ENST00000576359 CCDC7Q96M83 1385 aa19.65■□□□□ 0.74
RAB40B-211ENST00000576359 CNTLNQ9NXG0 1405 aa19.64■□□□□ 0.73
RAB40B-211ENST00000576359 ZCCHC11Q5TAX3 1644 aaKnown RBP19.64■□□□□ 0.73
RAB40B-211ENST00000576359 MAST1Q9Y2H9 1570 aa19.63■□□□□ 0.73
RAB40B-211ENST00000576359 POLR1AO95602 1720 aaPredicted RBP19.62■□□□□ 0.73
RAB40B-211ENST00000576359 RSPH4AQ5TD94 716 aa19.61■□□□□ 0.73
RAB40B-211ENST00000576359 UHRF1BP1LA0JNW5 1464 aa19.6■□□□□ 0.73
RAB40B-211ENST00000576359 FAM135AQ9P2D6 1515 aa19.59■□□□□ 0.73
RAB40B-211ENST00000576359 ARHGEF12Q9NZN5 1544 aa19.58■□□□□ 0.73
RAB40B-211ENST00000576359 KIF7Q2M1P5 1343 aa19.57■□□□□ 0.72
RAB40B-211ENST00000576359 PLXNC1O60486 1568 aa19.56■□□□□ 0.72
RAB40B-211ENST00000576359 UHRF1BP1Q6BDS2 1440 aa19.56■□□□□ 0.72
RAB40B-211ENST00000576359 UNC13BO14795 1591 aa19.56■□□□□ 0.72
RAB40B-211ENST00000576359 ZNF326Q5BKZ1 582 aaKnown RBP19.55■□□□□ 0.72
RAB40B-211ENST00000576359 PLEKHH2Q8IVE3 1493 aa19.55■□□□□ 0.72
RAB40B-211ENST00000576359 KDM5CP41229 1560 aa19.55■□□□□ 0.72
RAB40B-211ENST00000576359 PLCH2O75038 1416 aa19.54■□□□□ 0.72
RAB40B-211ENST00000576359 BCORL1Q5H9F3 1711 aa19.54■□□□□ 0.72
RAB40B-211ENST00000576359 USP47Q96K76 1375 aa19.53■□□□□ 0.72
RAB40B-211ENST00000576359 RALGAPBQ86X10 1494 aa19.52■□□□□ 0.72
RAB40B-211ENST00000576359 ABCC1P33527 1531 aa19.5■□□□□ 0.71
RAB40B-211ENST00000576359 FKBP8Q14318 412 aa19.49■□□□□ 0.71
RAB40B-211ENST00000576359 CCDC184Q52MB2 194 aa19.49■□□□□ 0.71
RAB40B-211ENST00000576359 PRKRIP1Q9H875 184 aaPredicted RBP19.49■□□□□ 0.71
RAB40B-211ENST00000576359 IQGAP3Q86VI3 1631 aa19.48■□□□□ 0.71
RAB40B-211ENST00000576359 DUOX2Q9NRD8 1548 aa19.47■□□□□ 0.71
RAB40B-211ENST00000576359 PLA2R1Q13018 1463 aa19.47■□□□□ 0.71
RAB40B-211ENST00000576359 TRAPPC8Q9Y2L5 1435 aa19.46■□□□□ 0.71
RAB40B-211ENST00000576359 EFCAB2Q5VUJ9 269 aa19.46■□□□□ 0.71
RAB40B-211ENST00000576359 KDM2AQ9Y2K7 1162 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms