RNA–Protein interactions for RNA: ENST00000576114.1

POLR2A-205, Transcript of RNA polymerase II subunit A, humanhuman

TSL 2

Gene POLR2A, Length 245 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-205ENST00000576114 MAGI2Q86UL8 1455 aa12.84□□□□□ -0.35
POLR2A-205ENST00000576114 ZNF335Q9H4Z2 1342 aaPredicted RBP12.82□□□□□ -0.36
POLR2A-205ENST00000576114 GOLGA3Q08378 1498 aa12.81□□□□□ -0.36
POLR2A-205ENST00000576114 ARID3CA6NKF2 412 aa12.81□□□□□ -0.36
POLR2A-205ENST00000576114 CFAP74Q9C0B2 1584 aa12.81□□□□□ -0.36
POLR2A-205ENST00000576114 RAPGEF2Q9Y4G8 1499 aa12.8□□□□□ -0.36
POLR2A-205ENST00000576114 SUPT5HO00267 1087 aaKnown RBP12.8□□□□□ -0.36
POLR2A-205ENST00000576114 PHF23Q9BUL5 403 aaPredicted RBP12.8□□□□□ -0.36
POLR2A-205ENST00000576114 ATP10AO60312 1499 aa12.78□□□□□ -0.36
POLR2A-205ENST00000576114 CAMSAP1Q5T5Y3 1602 aa12.77□□□□□ -0.36
POLR2A-205ENST00000576114 RGS17Q9UGC6 210 aaPredicted RBP12.76□□□□□ -0.37
POLR2A-205ENST00000576114 SRCAPQ6ZRS2 3230 aa12.75□□□□□ -0.37
POLR2A-205ENST00000576114 C9orf84Q5VXU9 1444 aa12.75□□□□□ -0.37
POLR2A-205ENST00000576114 SUPT6HQ7KZ85 1726 aaKnown RBP12.73□□□□□ -0.37
POLR2A-205ENST00000576114 ALKQ9UM73 1620 aa12.73□□□□□ -0.37
POLR2A-205ENST00000576114 TRAPPC8Q9Y2L5 1435 aa12.72□□□□□ -0.37
POLR2A-205ENST00000576114 PIP4K2BP78356 416 aa12.72□□□□□ -0.37
POLR2A-205ENST00000576114 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.72□□□□□ -0.37
POLR2A-205ENST00000576114 SCAF1Q9H7N4 1312 aaKnown RBP12.71□□□□□ -0.37
POLR2A-205ENST00000576114 NCKAP5LQ9HCH0 1330 aa12.71□□□□□ -0.37
POLR2A-205ENST00000576114 RAPGEF6Q8TEU7 1601 aa12.71□□□□□ -0.37
POLR2A-205ENST00000576114 SETD1AO15047 1707 aaKnown RBP12.68□□□□□ -0.38
POLR2A-205ENST00000576114 ZNF142P52746 1687 aaPredicted RBP12.67□□□□□ -0.38
POLR2A-205ENST00000576114 TOM1O60784 492 aa12.67□□□□□ -0.38
POLR2A-205ENST00000576114 SCAPERQ9BY12 1400 aa12.67□□□□□ -0.38
POLR2A-205ENST00000576114 REREQ9P2R6 1566 aa12.66□□□□□ -0.38
POLR2A-205ENST00000576114 TCOF1Q13428 1488 aaKnown RBP12.65□□□□□ -0.38
POLR2A-205ENST00000576114 NUP153P49790 1475 aaKnown RBP12.65□□□□□ -0.38
POLR2A-205ENST00000576114 PLA2R1Q13018 1463 aa12.65□□□□□ -0.38
POLR2A-205ENST00000576114 DIP2CQ9Y2E4 1556 aa12.64□□□□□ -0.39
POLR2A-205ENST00000576114 AGLP35573 1532 aa12.63□□□□□ -0.39
POLR2A-205ENST00000576114 MROH2AA6NES4 1674 aa12.63□□□□□ -0.39
POLR2A-205ENST00000576114 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.62□□□□□ -0.39
POLR2A-205ENST00000576114 HNRNPUL2Q1KMD3 747 aaKnown RBP12.62□□□□□ -0.39
POLR2A-205ENST00000576114 POTEAQ6S8J7 498 aa12.62□□□□□ -0.39
POLR2A-205ENST00000576114 CPS1P31327 1500 aa12.62□□□□□ -0.39
POLR2A-205ENST00000576114 KDM5CP41229 1560 aa12.61□□□□□ -0.39
POLR2A-205ENST00000576114 PKD2Q13563 968 aa12.61□□□□□ -0.39
POLR2A-205ENST00000576114 P3H3Q8IVL6 736 aa12.61□□□□□ -0.39
POLR2A-205ENST00000576114 NPATQ14207 1427 aa12.61□□□□□ -0.39
POLR2A-205ENST00000576114 ABCA6Q8N139 1617 aa12.6□□□□□ -0.39
POLR2A-205ENST00000576114 MYO3AQ8NEV4 1616 aa12.6□□□□□ -0.39
POLR2A-205ENST00000576114 SAMD9Q5K651 1589 aa12.6□□□□□ -0.39
POLR2A-205ENST00000576114 POLR1AO95602 1720 aaPredicted RBP12.59□□□□□ -0.39
POLR2A-205ENST00000576114 PLCH2O75038 1416 aa12.58□□□□□ -0.4
POLR2A-205ENST00000576114 PTPRKQ15262 1439 aa12.58□□□□□ -0.4
POLR2A-205ENST00000576114 PPP6R1Q9UPN7 881 aa12.58□□□□□ -0.4
POLR2A-205ENST00000576114 CEP170BQ9Y4F5 1589 aaPredicted RBP12.58□□□□□ -0.4
POLR2A-205ENST00000576114 PLEKHD1A6NEE1 506 aa12.57□□□□□ -0.4
POLR2A-205ENST00000576114 FAM9AQ8IZU1 332 aaPredicted RBP12.57□□□□□ -0.4
POLR2A-205ENST00000576114 SHANK2Q9UPX8 1470 aa12.57□□□□□ -0.4
POLR2A-205ENST00000576114 MYO5CQ9NQX4 1742 aa12.57□□□□□ -0.4
POLR2A-205ENST00000576114 CNTLNQ9NXG0 1405 aa12.55□□□□□ -0.4
POLR2A-205ENST00000576114 ZNF518AQ6AHZ1 1483 aa12.55□□□□□ -0.4
POLR2A-205ENST00000576114 NEURL4Q96JN8 1562 aa12.55□□□□□ -0.4
POLR2A-205ENST00000576114 STRCP1A6NGW2 1772 aa12.54□□□□□ -0.4
POLR2A-205ENST00000576114 VWDEQ8N2E2 1590 aa12.54□□□□□ -0.4
POLR2A-205ENST00000576114 SENP3Q9H4L4 574 aaPredicted RBP12.53□□□□□ -0.4
POLR2A-205ENST00000576114 ESF1Q9H501 851 aaKnown RBP12.53□□□□□ -0.4
POLR2A-205ENST00000576114 AFAP1Q8N556 730 aa12.52□□□□□ -0.41
POLR2A-205ENST00000576114 ZMYM3Q14202 1370 aa12.52□□□□□ -0.41
POLR2A-205ENST00000576114 DNMT1P26358 1616 aaKnown RBP12.51□□□□□ -0.41
POLR2A-205ENST00000576114 CLTCQ00610 1675 aaKnown RBP12.51□□□□□ -0.41
POLR2A-205ENST00000576114 KIDINS220Q9ULH0 1771 aa12.51□□□□□ -0.41
POLR2A-205ENST00000576114 UPF1Q92900 1129 aaKnown RBP eCLIP12.5□□□□□ -0.41
POLR2A-205ENST00000576114 MLH3Q9UHC1 1453 aa12.5□□□□□ -0.41
POLR2A-205ENST00000576114 RNF17Q9BXT8 1623 aaKnown RBP12.48□□□□□ -0.41
POLR2A-205ENST00000576114 PRXQ9BXM0 1461 aa12.48□□□□□ -0.41
POLR2A-205ENST00000576114 EFCAB2Q5VUJ9 269 aa12.48□□□□□ -0.41
POLR2A-205ENST00000576114 XIRP1Q702N8 1843 aaKnown RBP12.46□□□□□ -0.41
POLR2A-205ENST00000576114 CDC42BPBQ9Y5S2 1711 aa12.45□□□□□ -0.42
POLR2A-205ENST00000576114 LRRC7Q96NW7 1537 aa12.44□□□□□ -0.42
POLR2A-205ENST00000576114 A2ML1A8K2U0 1454 aa12.44□□□□□ -0.42
POLR2A-205ENST00000576114 CDK13Q14004 1512 aaKnown RBP12.43□□□□□ -0.42
POLR2A-205ENST00000576114 ITSN2Q9NZM3 1697 aa12.42□□□□□ -0.42
POLR2A-205ENST00000576114 KIF14Q15058 1648 aa12.42□□□□□ -0.42
POLR2A-205ENST00000576114 MYT1LQ9UL68 1186 aa12.42□□□□□ -0.42
POLR2A-205ENST00000576114 SYNMO15061 1565 aa12.42□□□□□ -0.42
POLR2A-205ENST00000576114 ARHGAP5Q13017 1502 aa12.4□□□□□ -0.42
POLR2A-205ENST00000576114 MED14O60244 1454 aa12.39□□□□□ -0.43
POLR2A-205ENST00000576114 DEPDC5O75140 1603 aa12.38□□□□□ -0.43
POLR2A-205ENST00000576114 IQGAP1P46940 1657 aa12.38□□□□□ -0.43
POLR2A-205ENST00000576114 ABCC1P33527 1531 aa12.37□□□□□ -0.43
POLR2A-205ENST00000576114 NPHP4O75161 1426 aaPredicted RBP12.34□□□□□ -0.43
POLR2A-205ENST00000576114 FAM135BQ49AJ0 1406 aa12.34□□□□□ -0.43
POLR2A-205ENST00000576114 PLXNC1O60486 1568 aa12.34□□□□□ -0.43
POLR2A-205ENST00000576114 ZC3H13Q5T200 1668 aaKnown RBP12.33□□□□□ -0.44
POLR2A-205ENST00000576114 PREX2Q70Z35 1606 aa12.33□□□□□ -0.44
POLR2A-205ENST00000576114 ROBO1Q9Y6N7 1651 aa12.32□□□□□ -0.44
POLR2A-205ENST00000576114 ANKLE2Q86XL3 938 aa12.32□□□□□ -0.44
POLR2A-205ENST00000576114 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.31□□□□□ -0.44
POLR2A-205ENST00000576114 SAMD9LQ8IVG5 1584 aa12.31□□□□□ -0.44
POLR2A-205ENST00000576114 TRIM52Q96A61 297 aa12.29□□□□□ -0.44
POLR2A-205ENST00000576114 CDC42BPAQ5VT25 1732 aa12.28□□□□□ -0.44
POLR2A-205ENST00000576114 LRRIQ1Q96JM4 1722 aa12.28□□□□□ -0.44
POLR2A-205ENST00000576114 PHLPP1O60346 1717 aa12.26□□□□□ -0.45
POLR2A-205ENST00000576114 FBXO31Q5XUX0 539 aaPredicted RBP12.25□□□□□ -0.45
POLR2A-205ENST00000576114 TNRQ92752 1358 aa12.25□□□□□ -0.45
POLR2A-205ENST00000576114 TROQ12816 1431 aaPredicted RBP12.25□□□□□ -0.45
POLR2A-205ENST00000576114 UGGT1Q9NYU2 1555 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms