RNA–Protein interactions for RNA: ENST00000574234.1

TRIM25-208, Transcript of tripartite motif containing 25, humanhuman

TSL 2

Gene TRIM25, Length 471 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-208ENST00000574234 VASPP50552 380 aaPredicted RBP9.37□□□□□ -0.91
TRIM25-208ENST00000574234 FRMPD1Q5SYB0 1578 aa9.37□□□□□ -0.91
TRIM25-208ENST00000574234 PHLDB1Q86UU1 1377 aa9.37□□□□□ -0.91
TRIM25-208ENST00000574234 KIAA0556O60303 1618 aa9.36□□□□□ -0.91
TRIM25-208ENST00000574234 DCAF8L1A6NGE4 600 aa9.36□□□□□ -0.91
TRIM25-208ENST00000574234 TTC37Q6PGP7 1564 aa9.36□□□□□ -0.91
TRIM25-208ENST00000574234 ARHGEF40Q8TER5 1519 aa9.36□□□□□ -0.91
TRIM25-208ENST00000574234 TTBK1Q5TCY1 1321 aaPredicted RBP9.35□□□□□ -0.91
TRIM25-208ENST00000574234 ABCA9Q8IUA7 1624 aa9.35□□□□□ -0.91
TRIM25-208ENST00000574234 HSPA2P54652 639 aa9.35□□□□□ -0.91
TRIM25-208ENST00000574234 VSIG10Q8N0Z9 540 aa9.35□□□□□ -0.91
TRIM25-208ENST00000574234 UGGT2Q9NYU1 1516 aa9.35□□□□□ -0.91
TRIM25-208ENST00000574234 IGF1RP08069 1367 aa9.34□□□□□ -0.91
TRIM25-208ENST00000574234 RICTORQ6R327 1708 aa9.34□□□□□ -0.92
TRIM25-208ENST00000574234 TAOK2Q9UL54 1235 aa9.33□□□□□ -0.92
TRIM25-208ENST00000574234 IFNLR1Q8IU57 520 aaPredicted RBP9.32□□□□□ -0.92
TRIM25-208ENST00000574234 YEATS2Q9ULM3 1422 aa9.31□□□□□ -0.92
TRIM25-208ENST00000574234 SIGLEC1Q9BZZ2 1709 aa9.31□□□□□ -0.92
TRIM25-208ENST00000574234 NEO1Q92859 1461 aa9.31□□□□□ -0.92
TRIM25-208ENST00000574234 ABCA8O94911 1581 aa9.31□□□□□ -0.92
TRIM25-208ENST00000574234 SETD1BQ9UPS6 1966 aaKnown RBP9.31□□□□□ -0.92
TRIM25-208ENST00000574234 LTBP4Q8N2S1 1624 aa9.31□□□□□ -0.92
TRIM25-208ENST00000574234 KIF27Q86VH2 1401 aa9.3□□□□□ -0.92
TRIM25-208ENST00000574234 FANCAO15360 1455 aa9.29□□□□□ -0.92
TRIM25-208ENST00000574234 MKRN4PQ13434 485 aaPredicted RBP9.29□□□□□ -0.92
TRIM25-208ENST00000574234 PKD2Q13563 968 aa9.29□□□□□ -0.92
TRIM25-208ENST00000574234 CTTNBP2Q8WZ74 1663 aa9.28□□□□□ -0.92
TRIM25-208ENST00000574234 POGZQ7Z3K3 1410 aa9.28□□□□□ -0.92
TRIM25-208ENST00000574234 ARID4BQ4LE39 1312 aaPredicted RBP9.28□□□□□ -0.92
TRIM25-208ENST00000574234 PTPRTO14522 1441 aa9.27□□□□□ -0.93
TRIM25-208ENST00000574234 MED1Q15648 1581 aaPredicted RBP9.27□□□□□ -0.93
TRIM25-208ENST00000574234 ZMYM4Q5VZL5 1548 aa9.26□□□□□ -0.93
TRIM25-208ENST00000574234 CARMIL1Q5VZK9 1371 aa9.25□□□□□ -0.93
TRIM25-208ENST00000574234 CFAP74Q9C0B2 1584 aa9.25□□□□□ -0.93
TRIM25-208ENST00000574234 KCNH8Q96L42 1107 aa9.25□□□□□ -0.93
TRIM25-208ENST00000574234 RAPGEF3O95398 923 aa9.24□□□□□ -0.93
TRIM25-208ENST00000574234 EFCAB5A4FU69 1503 aa9.24□□□□□ -0.93
TRIM25-208ENST00000574234 ARHGEF12Q9NZN5 1544 aa9.23□□□□□ -0.93
TRIM25-208ENST00000574234 AKNAQ7Z591 1439 aa9.22□□□□□ -0.93
TRIM25-208ENST00000574234 APLP2Q06481 763 aa9.21□□□□□ -0.94
TRIM25-208ENST00000574234 FHOD3Q2V2M9 1422 aa9.21□□□□□ -0.94
TRIM25-208ENST00000574234 MAGI2Q86UL8 1455 aa9.21□□□□□ -0.94
TRIM25-208ENST00000574234 ZFYVE16Q7Z3T8 1539 aa9.21□□□□□ -0.94
TRIM25-208ENST00000574234 KDM2AQ9Y2K7 1162 aa9.2□□□□□ -0.94
TRIM25-208ENST00000574234 GOLGA3Q08378 1498 aa9.2□□□□□ -0.94
TRIM25-208ENST00000574234 UHRF1BP1Q6BDS2 1440 aa9.19□□□□□ -0.94
TRIM25-208ENST00000574234 C3P01024 1663 aa9.19□□□□□ -0.94
TRIM25-208ENST00000574234 DENND4BO75064 1496 aaPredicted RBP9.18□□□□□ -0.94
TRIM25-208ENST00000574234 TPRNQ4KMQ1 711 aa9.17□□□□□ -0.94
TRIM25-208ENST00000574234 BBXQ8WY36 941 aaPredicted RBP9.17□□□□□ -0.94
TRIM25-208ENST00000574234 ATP10BO94823 1461 aa9.15□□□□□ -0.94
TRIM25-208ENST00000574234 RAPGEF2Q9Y4G8 1499 aa9.15□□□□□ -0.94
TRIM25-208ENST00000574234 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.15□□□□□ -0.94
TRIM25-208ENST00000574234 HECW1Q76N89 1606 aa9.15□□□□□ -0.94
TRIM25-208ENST00000574234 SUPT6HQ7KZ85 1726 aaKnown RBP9.14□□□□□ -0.95
TRIM25-208ENST00000574234 NCOA1Q15788 1441 aa9.14□□□□□ -0.95
TRIM25-208ENST00000574234 UBAP1LF5GYI3 381 aa9.11□□□□□ -0.95
TRIM25-208ENST00000574234 RAPGEF6Q8TEU7 1601 aa9.11□□□□□ -0.95
TRIM25-208ENST00000574234 ATP10AO60312 1499 aa9.1□□□□□ -0.95
TRIM25-208ENST00000574234 PAXIP1Q6ZW49 1069 aaPredicted RBP9.1□□□□□ -0.95
TRIM25-208ENST00000574234 C9orf84Q5VXU9 1444 aa9.1□□□□□ -0.95
TRIM25-208ENST00000574234 ZNF142P52746 1687 aaPredicted RBP9.1□□□□□ -0.95
TRIM25-208ENST00000574234 CAMSAP1Q5T5Y3 1602 aa9.09□□□□□ -0.95
TRIM25-208ENST00000574234 REREQ9P2R6 1566 aa9.09□□□□□ -0.95
TRIM25-208ENST00000574234 MROH2AA6NES4 1674 aa9.08□□□□□ -0.96
TRIM25-208ENST00000574234 MLECQ14165 292 aa9.08□□□□□ -0.96
TRIM25-208ENST00000574234 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.07□□□□□ -0.96
TRIM25-208ENST00000574234 CEBPAP49715 358 aaPredicted RBP9.07□□□□□ -0.96
TRIM25-208ENST00000574234 ECM2O94769 699 aaPredicted RBP9.06□□□□□ -0.96
TRIM25-208ENST00000574234 SPOCK2Q92563 424 aa9.06□□□□□ -0.96
TRIM25-208ENST00000574234 CFAP44Q96MT7 982 aa9.06□□□□□ -0.96
TRIM25-208ENST00000574234 TRAPPC8Q9Y2L5 1435 aa9.05□□□□□ -0.96
TRIM25-208ENST00000574234 HSPA1LP34931 641 aa9.05□□□□□ -0.96
TRIM25-208ENST00000574234 FAM9AQ8IZU1 332 aaPredicted RBP9.05□□□□□ -0.96
TRIM25-208ENST00000574234 POLR1AO95602 1720 aaPredicted RBP9.05□□□□□ -0.96
TRIM25-208ENST00000574234 MYO5CQ9NQX4 1742 aa9.05□□□□□ -0.96
TRIM25-208ENST00000574234 SAMD9Q5K651 1589 aa9.04□□□□□ -0.96
TRIM25-208ENST00000574234 PLA2R1Q13018 1463 aa9.04□□□□□ -0.96
TRIM25-208ENST00000574234 AGLP35573 1532 aa9.04□□□□□ -0.96
TRIM25-208ENST00000574234 ZNF335Q9H4Z2 1342 aaPredicted RBP9.04□□□□□ -0.96
TRIM25-208ENST00000574234 CPS1P31327 1500 aa9.03□□□□□ -0.96
TRIM25-208ENST00000574234 KDM5CP41229 1560 aa9.03□□□□□ -0.96
TRIM25-208ENST00000574234 MYO3AQ8NEV4 1616 aa9.02□□□□□ -0.96
TRIM25-208ENST00000574234 DIP2CQ9Y2E4 1556 aa9.02□□□□□ -0.97
TRIM25-208ENST00000574234 TCOF1Q13428 1488 aaKnown RBP9.02□□□□□ -0.97
TRIM25-208ENST00000574234 POLA2Q14181 598 aa9.01□□□□□ -0.97
TRIM25-208ENST00000574234 NPATQ14207 1427 aa9.01□□□□□ -0.97
TRIM25-208ENST00000574234 KLHL34Q8N239 644 aa9.01□□□□□ -0.97
TRIM25-208ENST00000574234 ALKQ9UM73 1620 aa9.01□□□□□ -0.97
TRIM25-208ENST00000574234 NUP153P49790 1475 aaKnown RBP9.01□□□□□ -0.97
TRIM25-208ENST00000574234 CNTLNQ9NXG0 1405 aa9□□□□□ -0.97
TRIM25-208ENST00000574234 TOM1O60784 492 aa9□□□□□ -0.97
TRIM25-208ENST00000574234 TSHZ2Q9NRE2 1034 aa9□□□□□ -0.97
TRIM25-208ENST00000574234 ABCA6Q8N139 1617 aa9□□□□□ -0.97
TRIM25-208ENST00000574234 SCAPERQ9BY12 1400 aa8.99□□□□□ -0.97
TRIM25-208ENST00000574234 ARID3CA6NKF2 412 aa8.99□□□□□ -0.97
TRIM25-208ENST00000574234 SPRYD3Q8NCJ5 442 aa8.99□□□□□ -0.97
TRIM25-208ENST00000574234 ZNF518AQ6AHZ1 1483 aa8.99□□□□□ -0.97
TRIM25-208ENST00000574234 SETD1AO15047 1707 aaKnown RBP8.99□□□□□ -0.97
TRIM25-208ENST00000574234 CEP170BQ9Y4F5 1589 aaPredicted RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms