RNA–Protein interactions for RNA: ENST00000574218.1

CTNS-208, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-208ENST00000574218 PREX1Q8TCU6 1659 aa20.03■□□□□ 0.8
CTNS-208ENST00000574218 YEATS2Q9ULM3 1422 aa20.03■□□□□ 0.8
CTNS-208ENST00000574218 MYO5CQ9NQX4 1742 aa20.02■□□□□ 0.8
CTNS-208ENST00000574218 CERKQ8TCT0 537 aa20.02■□□□□ 0.8
CTNS-208ENST00000574218 PHF23Q9BUL5 403 aaPredicted RBP20■□□□□ 0.79
CTNS-208ENST00000574218 SCAPERQ9BY12 1400 aa19.99■□□□□ 0.79
CTNS-208ENST00000574218 CDK13Q14004 1512 aaKnown RBP19.98■□□□□ 0.79
CTNS-208ENST00000574218 C9orf84Q5VXU9 1444 aa19.96■□□□□ 0.79
CTNS-208ENST00000574218 ATP10AO60312 1499 aa19.96■□□□□ 0.79
CTNS-208ENST00000574218 PLCH2O75038 1416 aa19.95■□□□□ 0.78
CTNS-208ENST00000574218 ARHGEF12Q9NZN5 1544 aa19.95■□□□□ 0.78
CTNS-208ENST00000574218 ATP1B4Q9UN42 357 aaPredicted RBP19.94■□□□□ 0.78
CTNS-208ENST00000574218 SETD1BQ9UPS6 1966 aaKnown RBP19.94■□□□□ 0.78
CTNS-208ENST00000574218 EFCAB2Q5VUJ9 269 aa19.92■□□□□ 0.78
CTNS-208ENST00000574218 MYT1LQ9UL68 1186 aa19.91■□□□□ 0.78
CTNS-208ENST00000574218 DMRT2Q9Y5R5 561 aa19.91■□□□□ 0.78
CTNS-208ENST00000574218 KIF14Q15058 1648 aa19.91■□□□□ 0.78
CTNS-208ENST00000574218 CDK11AQ9UQ88 783 aaPredicted RBP19.9■□□□□ 0.78
CTNS-208ENST00000574218 ZNF518AQ6AHZ1 1483 aa19.88■□□□□ 0.77
CTNS-208ENST00000574218 UHRF1BP1Q6BDS2 1440 aa19.88■□□□□ 0.77
CTNS-208ENST00000574218 STRCQ7RTU9 1775 aa19.88■□□□□ 0.77
CTNS-208ENST00000574218 ARHGAP5Q13017 1502 aa19.87■□□□□ 0.77
CTNS-208ENST00000574218 FMN1Q68DA7 1419 aa19.87■□□□□ 0.77
CTNS-208ENST00000574218 DISP3Q9P2K9 1392 aa19.85■□□□□ 0.77
CTNS-208ENST00000574218 CEBPAP49715 358 aaPredicted RBP19.85■□□□□ 0.77
CTNS-208ENST00000574218 CLIP1P30622 1438 aa19.84■□□□□ 0.77
CTNS-208ENST00000574218 ESF1Q9H501 851 aaKnown RBP19.83■□□□□ 0.77
CTNS-208ENST00000574218 KDM5CP41229 1560 aa19.83■□□□□ 0.76
CTNS-208ENST00000574218 C3P01024 1663 aa19.82■□□□□ 0.76
CTNS-208ENST00000574218 UBTFP17480 764 aaKnown RBP19.81■□□□□ 0.76
CTNS-208ENST00000574218 DIP2CQ9Y2E4 1556 aa19.81■□□□□ 0.76
CTNS-208ENST00000574218 REREQ9P2R6 1566 aa19.79■□□□□ 0.76
CTNS-208ENST00000574218 TROQ12816 1431 aaPredicted RBP19.79■□□□□ 0.76
CTNS-208ENST00000574218 CDC42BPBQ9Y5S2 1711 aa19.79■□□□□ 0.76
CTNS-208ENST00000574218 ABCA6Q8N139 1617 aa19.78■□□□□ 0.76
CTNS-208ENST00000574218 EHMT2Q96KQ7 1210 aa19.78■□□□□ 0.76
CTNS-208ENST00000574218 AFAP1Q8N556 730 aa19.77■□□□□ 0.76
CTNS-208ENST00000574218 LRRIQ1Q96JM4 1722 aa19.76■□□□□ 0.75
CTNS-208ENST00000574218 SPATA31D1Q6ZQQ2 1576 aa19.75■□□□□ 0.75
CTNS-208ENST00000574218 PREX2Q70Z35 1606 aa19.75■□□□□ 0.75
CTNS-208ENST00000574218 PTPRTO14522 1441 aa19.75■□□□□ 0.75
CTNS-208ENST00000574218 ITSN2Q9NZM3 1697 aa19.75■□□□□ 0.75
CTNS-208ENST00000574218 ARHGAP35Q9NRY4 1499 aa19.74■□□□□ 0.75
CTNS-208ENST00000574218 MLH3Q9UHC1 1453 aa19.73■□□□□ 0.75
CTNS-208ENST00000574218 SOCS7O14512 581 aa19.72■□□□□ 0.75
CTNS-208ENST00000574218 AGLP35573 1532 aa19.71■□□□□ 0.75
CTNS-208ENST00000574218 ABCC1P33527 1531 aa19.71■□□□□ 0.75
CTNS-208ENST00000574218 CNTLNQ9NXG0 1405 aa19.69■□□□□ 0.74
CTNS-208ENST00000574218 TRAPPC8Q9Y2L5 1435 aa19.69■□□□□ 0.74
CTNS-208ENST00000574218 ILDR2Q71H61 639 aa19.69■□□□□ 0.74
CTNS-208ENST00000574218 CDC42BPAQ5VT25 1732 aa19.68■□□□□ 0.74
CTNS-208ENST00000574218 KIDINS220Q9ULH0 1771 aa19.67■□□□□ 0.74
CTNS-208ENST00000574218 IQSEC2Q5JU85 1478 aa19.67■□□□□ 0.74
CTNS-208ENST00000574218 MROH2AA6NES4 1674 aa19.67■□□□□ 0.74
CTNS-208ENST00000574218 SUPT6HQ7KZ85 1726 aaKnown RBP19.67■□□□□ 0.74
CTNS-208ENST00000574218 CCDC18Q5T9S5 1454 aa19.67■□□□□ 0.74
CTNS-208ENST00000574218 NCOA1Q15788 1441 aa19.64■□□□□ 0.73
CTNS-208ENST00000574218 LTBP4Q8N2S1 1624 aa19.64■□□□□ 0.73
CTNS-208ENST00000574218 CAMSAP1Q5T5Y3 1602 aa19.62■□□□□ 0.73
CTNS-208ENST00000574218 NPATQ14207 1427 aa19.59■□□□□ 0.73
CTNS-208ENST00000574218 CLTCQ00610 1675 aaKnown RBP19.59■□□□□ 0.73
CTNS-208ENST00000574218 SAMD9LQ8IVG5 1584 aa19.58■□□□□ 0.73
CTNS-208ENST00000574218 CASKIN1Q8WXD9 1431 aa19.58■□□□□ 0.72
CTNS-208ENST00000574218 ZNF777Q9ULD5 760 aaPredicted RBP19.57■□□□□ 0.72
CTNS-208ENST00000574218 ZNF142P52746 1687 aaPredicted RBP19.56■□□□□ 0.72
CTNS-208ENST00000574218 MYO3AQ8NEV4 1616 aa19.55■□□□□ 0.72
CTNS-208ENST00000574218 SYCP2Q9BX26 1530 aa19.55■□□□□ 0.72
CTNS-208ENST00000574218 SPAG9O60271 1321 aaKnown RBP19.54■□□□□ 0.72
CTNS-208ENST00000574218 ZMYM3Q14202 1370 aa19.53■□□□□ 0.72
CTNS-208ENST00000574218 UBAP1LF5GYI3 381 aa19.52■□□□□ 0.72
CTNS-208ENST00000574218 ATP7AQ04656 1500 aa19.51■□□□□ 0.71
CTNS-208ENST00000574218 FYCO1Q9BQS8 1478 aa19.51■□□□□ 0.71
CTNS-208ENST00000574218 NCKAP5LQ9HCH0 1330 aa19.51■□□□□ 0.71
CTNS-208ENST00000574218 CEP170BQ9Y4F5 1589 aaPredicted RBP19.5■□□□□ 0.71
CTNS-208ENST00000574218 PLEKHH2Q8IVE3 1493 aa19.49■□□□□ 0.71
CTNS-208ENST00000574218 PKD2Q13563 968 aa19.49■□□□□ 0.71
CTNS-208ENST00000574218 ADGBQ8N7X0 1667 aa19.49■□□□□ 0.71
CTNS-208ENST00000574218 ZNF335Q9H4Z2 1342 aaPredicted RBP19.49■□□□□ 0.71
CTNS-208ENST00000574218 INO80Q9ULG1 1556 aaPredicted RBP19.49■□□□□ 0.71
CTNS-208ENST00000574218 PLA2R1Q13018 1463 aa19.48■□□□□ 0.71
CTNS-208ENST00000574218 A2MP01023 1474 aa19.48■□□□□ 0.71
CTNS-208ENST00000574218 HNRNPMP52272 730 aaKnown RBP eCLIP19.47■□□□□ 0.71
CTNS-208ENST00000574218 PLXNC1O60486 1568 aa19.47■□□□□ 0.71
CTNS-208ENST00000574218 GPATCH8Q9UKJ3 1502 aaKnown RBP19.46■□□□□ 0.71
CTNS-208ENST00000574218 GGT6Q6P531 493 aa19.45■□□□□ 0.7
CTNS-208ENST00000574218 CFDP1Q9UEE9 299 aaPredicted RBP19.44■□□□□ 0.7
CTNS-208ENST00000574218 KIAA1107Q9UPP5 1409 aa19.43■□□□□ 0.7
CTNS-208ENST00000574218 POLR1AO95602 1720 aaPredicted RBP19.43■□□□□ 0.7
CTNS-208ENST00000574218 CCNB3Q8WWL7 1395 aa19.43■□□□□ 0.7
CTNS-208ENST00000574218 PTPRKQ15262 1439 aa19.42■□□□□ 0.7
CTNS-208ENST00000574218 TCOF1Q13428 1488 aaKnown RBP19.42■□□□□ 0.7
CTNS-208ENST00000574218 PPP6R1Q9UPN7 881 aa19.42■□□□□ 0.7
CTNS-208ENST00000574218 SCAF1Q9H7N4 1312 aaKnown RBP19.4■□□□□ 0.7
CTNS-208ENST00000574218 DNMT1P26358 1616 aaKnown RBP19.37■□□□□ 0.69
CTNS-208ENST00000574218 A2ML1A8K2U0 1454 aa19.37■□□□□ 0.69
CTNS-208ENST00000574218 MTUS2Q5JR59 1369 aa19.37■□□□□ 0.69
CTNS-208ENST00000574218 CPS1P31327 1500 aa19.34■□□□□ 0.69
CTNS-208ENST00000574218 TOM1O60784 492 aa19.33■□□□□ 0.68
CTNS-208ENST00000574218 PIP4K2BP78356 416 aa19.32■□□□□ 0.68
CTNS-208ENST00000574218 MED1Q15648 1581 aaPredicted RBP19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms