RNA–Protein interactions for RNA: ENST00000574085.5

TRPV1-208, Transcript of transient receptor potential cation channel subfamily V member 1, humanhuman

TSL 2

Gene TRPV1, Length 2,644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPV1-208ENST00000574085 POLA1P09884 1462 aaPredicted RBP17.12■□□□□ 0.33
TRPV1-208ENST00000574085 TOPBP1Q92547 1522 aa17.12■□□□□ 0.33
TRPV1-208ENST00000574085 NPM2Q86SE8 214 aaKnown RBP17.12■□□□□ 0.33
TRPV1-208ENST00000574085 DNAJC5BQ9UF47 199 aa17.12■□□□□ 0.33
TRPV1-208ENST00000574085 KIF7Q2M1P5 1343 aa17.12■□□□□ 0.33
TRPV1-208ENST00000574085 SNAPC4Q5SXM2 1469 aa17.11■□□□□ 0.33
TRPV1-208ENST00000574085 DNMBPQ6XZF7 1577 aa17.11■□□□□ 0.33
TRPV1-208ENST00000574085 CHIC2Q9UKJ5 165 aa17.1■□□□□ 0.33
TRPV1-208ENST00000574085 LAS1LQ9Y4W2 734 aaKnown RBP17.09■□□□□ 0.33
TRPV1-208ENST00000574085 CNGB1Q14028 1251 aaPredicted RBP17.09■□□□□ 0.33
TRPV1-208ENST00000574085 NEFMP07197 916 aa17.08■□□□□ 0.33
TRPV1-208ENST00000574085 ABCA5Q8WWZ7 1642 aa17.07■□□□□ 0.32
TRPV1-208ENST00000574085 GCC2Q8IWJ2 1684 aa17.07■□□□□ 0.32
TRPV1-208ENST00000574085 SENP3-EIF4A1A0A087X0R7 540 aa17.07■□□□□ 0.32
TRPV1-208ENST00000574085 ABCA10Q8WWZ4 1543 aa17.06■□□□□ 0.32
TRPV1-208ENST00000574085 FOXD1Q16676 465 aa17.06■□□□□ 0.32
TRPV1-208ENST00000574085 NBPF8Q3BBV2 869 aa17.06■□□□□ 0.32
TRPV1-208ENST00000574085 KDM6BO15054 1643 aa17.06■□□□□ 0.32
TRPV1-208ENST00000574085 SUPT6HQ7KZ85 1726 aaKnown RBP17.06■□□□□ 0.32
TRPV1-208ENST00000574085 MPHOSPH9Q99550 1183 aa17.05■□□□□ 0.32
TRPV1-208ENST00000574085 LRRIQ1Q96JM4 1722 aa17.05■□□□□ 0.32
TRPV1-208ENST00000574085 POLR1AO95602 1720 aaPredicted RBP17.05■□□□□ 0.32
TRPV1-208ENST00000574085 CTTNBP2Q8WZ74 1663 aa17.05■□□□□ 0.32
TRPV1-208ENST00000574085 USP35Q9P2H5 1018 aa17.03■□□□□ 0.32
TRPV1-208ENST00000574085 SPATA31E1Q6ZUB1 1445 aa17.03■□□□□ 0.32
TRPV1-208ENST00000574085 URB2Q14146 1524 aaKnown RBP17.02■□□□□ 0.32
TRPV1-208ENST00000574085 EHBP1L1Q8N3D4 1523 aa17.02■□□□□ 0.31
TRPV1-208ENST00000574085 DHX29Q7Z478 1369 aaKnown RBP17.01■□□□□ 0.31
TRPV1-208ENST00000574085 UGGT2Q9NYU1 1516 aa17■□□□□ 0.31
TRPV1-208ENST00000574085 WASHC2CQ9Y4E1 1318 aa17■□□□□ 0.31
TRPV1-208ENST00000574085 TCERG1O14776 1098 aaKnown RBP17■□□□□ 0.31
TRPV1-208ENST00000574085 PDE4AP27815 886 aa16.99■□□□□ 0.31
TRPV1-208ENST00000574085 TDRD9Q8NDG6 1382 aaKnown RBP16.99■□□□□ 0.31
TRPV1-208ENST00000574085 GRIN2BQ13224 1484 aa16.98■□□□□ 0.31
TRPV1-208ENST00000574085 TEX14Q8IWB6 1497 aa16.98■□□□□ 0.31
TRPV1-208ENST00000574085 POLR3GLQ9BT43 218 aa16.98■□□□□ 0.31
TRPV1-208ENST00000574085 RPRD2Q5VT52 1461 aaKnown RBP16.97■□□□□ 0.31
TRPV1-208ENST00000574085 PPM1GO15355 546 aaPredicted RBP16.97■□□□□ 0.31
TRPV1-208ENST00000574085 TCOF1Q13428 1488 aaKnown RBP16.97■□□□□ 0.31
TRPV1-208ENST00000574085 EXOC6Q8TAG9 804 aa16.96■□□□□ 0.31
TRPV1-208ENST00000574085 ARHGEF11O15085 1522 aa16.95■□□□□ 0.3
TRPV1-208ENST00000574085 CUL7Q14999 1698 aa16.95■□□□□ 0.3
TRPV1-208ENST00000574085 RRP1P56182 461 aaKnown RBP16.95■□□□□ 0.3
TRPV1-208ENST00000574085 BACH2Q9BYV9 841 aa16.95■□□□□ 0.3
TRPV1-208ENST00000574085 LAMC3Q9Y6N6 1575 aa16.95■□□□□ 0.3
TRPV1-208ENST00000574085 ANKRD30BQ9BXX2 1392 aa16.95■□□□□ 0.3
TRPV1-208ENST00000574085 THOC2Q8NI27 1593 aaKnown RBP16.94■□□□□ 0.3
TRPV1-208ENST00000574085 PNISRQ8TF01 805 aaKnown RBP16.94■□□□□ 0.3
TRPV1-208ENST00000574085 MAGI3Q5TCQ9 1506 aa16.93■□□□□ 0.3
TRPV1-208ENST00000574085 SAMD9Q5K651 1589 aa16.93■□□□□ 0.3
TRPV1-208ENST00000574085 BRPF3Q9ULD4 1205 aa16.93■□□□□ 0.3
TRPV1-208ENST00000574085 TMC1Q8TDI8 760 aa16.92■□□□□ 0.3
TRPV1-208ENST00000574085 MIA2Q96PC5 1412 aa16.91■□□□□ 0.3
TRPV1-208ENST00000574085 MS4A1P11836 297 aa16.9■□□□□ 0.3
TRPV1-208ENST00000574085 BCORL1Q5H9F3 1711 aa16.89■□□□□ 0.3
TRPV1-208ENST00000574085 GSE1Q14687 1217 aa16.87■□□□□ 0.29
TRPV1-208ENST00000574085 GAPVD1Q14C86 1478 aa16.87■□□□□ 0.29
TRPV1-208ENST00000574085 RCAN3Q9UKA8 241 aa16.87■□□□□ 0.29
TRPV1-208ENST00000574085 USP47Q96K76 1375 aa16.87■□□□□ 0.29
TRPV1-208ENST00000574085 KIF21AQ7Z4S6 1674 aa16.87■□□□□ 0.29
TRPV1-208ENST00000574085 PDS5BQ9NTI5 1447 aa16.87■□□□□ 0.29
TRPV1-208ENST00000574085 DDRGK1Q96HY6 314 aa16.85■□□□□ 0.29
TRPV1-208ENST00000574085 SLC4A1APQ9BWU0 796 aaKnown RBP16.85■□□□□ 0.29
TRPV1-208ENST00000574085 LRPPRCP42704 1394 aaKnown RBP16.84■□□□□ 0.29
TRPV1-208ENST00000574085 GLIPR1L2Q4G1C9 344 aa16.84■□□□□ 0.29
TRPV1-208ENST00000574085 ZNF326Q5BKZ1 582 aaKnown RBP16.83■□□□□ 0.29
TRPV1-208ENST00000574085 NFKBIBQ15653 356 aa16.83■□□□□ 0.28
TRPV1-208ENST00000574085 ZMYND15Q9H091 742 aa16.83■□□□□ 0.28
TRPV1-208ENST00000574085 SKAP1Q86WV1 359 aa16.81■□□□□ 0.28
TRPV1-208ENST00000574085 ARID4BQ4LE39 1312 aaPredicted RBP16.8■□□□□ 0.28
TRPV1-208ENST00000574085 FRAT1Q92837 279 aaPredicted RBP16.8■□□□□ 0.28
TRPV1-208ENST00000574085 MBD5Q9P267 1494 aa16.8■□□□□ 0.28
TRPV1-208ENST00000574085 KIF15Q9NS87 1388 aa16.8■□□□□ 0.28
TRPV1-208ENST00000574085 BRD4O60885 1362 aaPredicted RBP16.79■□□□□ 0.28
TRPV1-208ENST00000574085 KDM5CP41229 1560 aa16.79■□□□□ 0.28
TRPV1-208ENST00000574085 ROCK2O75116 1388 aaKnown RBP16.79■□□□□ 0.28
TRPV1-208ENST00000574085 MYBBP1AQ9BQG0 1328 aaKnown RBP16.78■□□□□ 0.28
TRPV1-208ENST00000574085 ROCK1Q13464 1354 aa16.78■□□□□ 0.28
TRPV1-208ENST00000574085 SLC4A3P48751 1232 aa16.78■□□□□ 0.28
TRPV1-208ENST00000574085 DAPK1P53355 1430 aa16.78■□□□□ 0.28
TRPV1-208ENST00000574085 RSPH6AQ9H0K4 717 aa16.77■□□□□ 0.28
TRPV1-208ENST00000574085 KIF14Q15058 1648 aa16.77■□□□□ 0.27
TRPV1-208ENST00000574085 TARBP1Q13395 1621 aaKnown RBP16.76■□□□□ 0.27
TRPV1-208ENST00000574085 PLIN1O60240 522 aa16.75■□□□□ 0.27
TRPV1-208ENST00000574085 EPRSP07814 1512 aaKnown RBP16.74■□□□□ 0.27
TRPV1-208ENST00000574085 VSIG10Q8N0Z9 540 aa16.74■□□□□ 0.27
TRPV1-208ENST00000574085 CDK13Q14004 1512 aaKnown RBP16.74■□□□□ 0.27
TRPV1-208ENST00000574085 PDE3BQ13370 1112 aa16.74■□□□□ 0.27
TRPV1-208ENST00000574085 RALBP1Q15311 655 aa16.73■□□□□ 0.27
TRPV1-208ENST00000574085 ARID3CA6NKF2 412 aa16.73■□□□□ 0.27
TRPV1-208ENST00000574085 CRBNQ96SW2 442 aa16.73■□□□□ 0.27
TRPV1-208ENST00000574085 ABCC5O15440 1437 aa16.73■□□□□ 0.27
TRPV1-208ENST00000574085 CDCA7LQ96GN5 454 aa16.72■□□□□ 0.27
TRPV1-208ENST00000574085 PZPP20742 1482 aa16.72■□□□□ 0.27
TRPV1-208ENST00000574085 DNMT1P26358 1616 aaKnown RBP16.72■□□□□ 0.27
TRPV1-208ENST00000574085 KTN1Q86UP2 1357 aaKnown RBP16.71■□□□□ 0.27
TRPV1-208ENST00000574085 CARD11Q9BXL7 1154 aa16.68■□□□□ 0.26
TRPV1-208ENST00000574085 ZNF644Q9H582 1327 aaPredicted RBP16.68■□□□□ 0.26
TRPV1-208ENST00000574085 RALGAPBQ86X10 1494 aa16.67■□□□□ 0.26
TRPV1-208ENST00000574085 KIAA1107Q9UPP5 1409 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 127.9 ms