RNA–Protein interactions for RNA: ENST00000573992.5

EDC4-207, Transcript of enhancer of mRNA decapping 4, humanhuman

TSL 1 (best)

Gene EDC4, Length 3,934 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC4-207ENST00000573992 WDR43Q15061 677 aaKnown RBP eCLIP14.88□□□□□ -0.03
EDC4-207ENST00000573992 MYH16Q9H6N6 1097 aa14.87□□□□□ -0.03
EDC4-207ENST00000573992 ARAP1Q96P48 1450 aa14.87□□□□□ -0.03
EDC4-207ENST00000573992 TNNT2P45379 298 aaPredicted RBP14.87□□□□□ -0.03
EDC4-207ENST00000573992 RRP9O43818 475 aaKnown RBP14.86□□□□□ -0.03
EDC4-207ENST00000573992 FMN1Q68DA7 1419 aa14.86□□□□□ -0.03
EDC4-207ENST00000573992 PLIN1O60240 522 aa14.86□□□□□ -0.03
EDC4-207ENST00000573992 CUX2O14529 1486 aa14.85□□□□□ -0.03
EDC4-207ENST00000573992 MAPKBP1O60336 1514 aa14.85□□□□□ -0.03
EDC4-207ENST00000573992 PHLDB1Q86UU1 1377 aa14.85□□□□□ -0.03
EDC4-207ENST00000573992 CCDC18Q5T9S5 1454 aa14.84□□□□□ -0.03
EDC4-207ENST00000573992 CRBNQ96SW2 442 aa14.84□□□□□ -0.03
EDC4-207ENST00000573992 CENPQQ7L2Z9 268 aaPredicted RBP14.84□□□□□ -0.03
EDC4-207ENST00000573992 KDM2AQ9Y2K7 1162 aa14.84□□□□□ -0.03
EDC4-207ENST00000573992 FOXD1Q16676 465 aa14.83□□□□□ -0.04
EDC4-207ENST00000573992 CARD11Q9BXL7 1154 aa14.83□□□□□ -0.04
EDC4-207ENST00000573992 SPRYD3Q8NCJ5 442 aa14.83□□□□□ -0.04
EDC4-207ENST00000573992 ARID3CA6NKF2 412 aa14.82□□□□□ -0.04
EDC4-207ENST00000573992 MPHOSPH9Q99550 1183 aa14.82□□□□□ -0.04
EDC4-207ENST00000573992 RALBP1Q15311 655 aa14.82□□□□□ -0.04
EDC4-207ENST00000573992 KIF7Q2M1P5 1343 aa14.81□□□□□ -0.04
EDC4-207ENST00000573992 MSNP26038 577 aaKnown RBP14.81□□□□□ -0.04
EDC4-207ENST00000573992 UACAQ9BZF9 1416 aa14.8□□□□□ -0.04
EDC4-207ENST00000573992 GOLGA6L22H0YM25 854 aa14.79□□□□□ -0.04
EDC4-207ENST00000573992 SYNJ1O43426 1573 aa14.77□□□□□ -0.04
EDC4-207ENST00000573992 NLRP13Q86W25 1043 aa14.76□□□□□ -0.05
EDC4-207ENST00000573992 LRRC9Q6ZRR7 1453 aa14.76□□□□□ -0.05
EDC4-207ENST00000573992 KTN1Q86UP2 1357 aaKnown RBP14.75□□□□□ -0.05
EDC4-207ENST00000573992 A0A0U1RQG5 324 aaPredicted RBP14.75□□□□□ -0.05
EDC4-207ENST00000573992 MYBBP1AQ9BQG0 1328 aaKnown RBP14.75□□□□□ -0.05
EDC4-207ENST00000573992 CARMIL1Q5VZK9 1371 aa14.75□□□□□ -0.05
EDC4-207ENST00000573992 PEG3Q9GZU2 1588 aa14.75□□□□□ -0.05
EDC4-207ENST00000573992 POGKQ9P215 609 aa14.74□□□□□ -0.05
EDC4-207ENST00000573992 NCLP19338 710 aaKnown RBP14.74□□□□□ -0.05
EDC4-207ENST00000573992 CC2D1BQ5T0F9 858 aaKnown RBP14.73□□□□□ -0.05
EDC4-207ENST00000573992 PNISRQ8TF01 805 aaKnown RBP14.73□□□□□ -0.05
EDC4-207ENST00000573992 ARID3AQ99856 593 aa14.73□□□□□ -0.05
EDC4-207ENST00000573992 ROCK2O75116 1388 aaKnown RBP14.73□□□□□ -0.05
EDC4-207ENST00000573992 CC2D2AQ9P2K1 1620 aa14.73□□□□□ -0.05
EDC4-207ENST00000573992 KIF15Q9NS87 1388 aa14.72□□□□□ -0.05
EDC4-207ENST00000573992 ERICH3Q5RHP9 1530 aa14.72□□□□□ -0.05
EDC4-207ENST00000573992 NCAPD3P42695 1498 aa14.72□□□□□ -0.05
EDC4-207ENST00000573992 HSCBQ8IWL3 235 aa14.72□□□□□ -0.05
EDC4-207ENST00000573992 ZNF777Q9ULD5 760 aaPredicted RBP14.71□□□□□ -0.06
EDC4-207ENST00000573992 MRE11P49959 708 aa14.7□□□□□ -0.06
EDC4-207ENST00000573992 DNAJC5BQ9UF47 199 aa14.7□□□□□ -0.06
EDC4-207ENST00000573992 TPM2P07951 284 aa14.7□□□□□ -0.06
EDC4-207ENST00000573992 DNTTIP2Q5QJE6 756 aaKnown RBP14.69□□□□□ -0.06
EDC4-207ENST00000573992 SKAP1Q86WV1 359 aa14.69□□□□□ -0.06
EDC4-207ENST00000573992 PRXQ9BXM0 1461 aa14.68□□□□□ -0.06
EDC4-207ENST00000573992 GBP4Q96PP9 640 aa14.68□□□□□ -0.06
EDC4-207ENST00000573992 HSP90AB1P08238 724 aaKnown RBP14.67□□□□□ -0.06
EDC4-207ENST00000573992 DDX11L8A8MPP1 907 aa14.67□□□□□ -0.06
EDC4-207ENST00000573992 CDCA7LQ96GN5 454 aa14.67□□□□□ -0.06
EDC4-207ENST00000573992 PTMAP06454 111 aaKnown RBP14.66□□□□□ -0.06
EDC4-207ENST00000573992 FAM13BQ9NYF5 915 aa14.66□□□□□ -0.06
EDC4-207ENST00000573992 ESPNB1AK53 854 aa14.65□□□□□ -0.06
EDC4-207ENST00000573992 FGD6Q6ZV73 1430 aa14.65□□□□□ -0.06
EDC4-207ENST00000573992 MAPK8IP3Q9UPT6 1336 aa14.65□□□□□ -0.06
EDC4-207ENST00000573992 USP47Q96K76 1375 aa14.65□□□□□ -0.07
EDC4-207ENST00000573992 GOLGA2Q08379 1002 aa14.64□□□□□ -0.07
EDC4-207ENST00000573992 CLCN1P35523 988 aa14.63□□□□□ -0.07
EDC4-207ENST00000573992 DCAF11Q8TEB1 546 aa14.63□□□□□ -0.07
EDC4-207ENST00000573992 BRD4O60885 1362 aaPredicted RBP14.63□□□□□ -0.07
EDC4-207ENST00000573992 RRAGDQ9NQL2 400 aaPredicted RBP14.63□□□□□ -0.07
EDC4-207ENST00000573992 PTMSP20962 102 aa14.63□□□□□ -0.07
EDC4-207ENST00000573992 CHMP5Q9NZZ3 219 aa14.63□□□□□ -0.07
EDC4-207ENST00000573992 KNSTRNQ9Y448 316 aa14.63□□□□□ -0.07
EDC4-207ENST00000573992 TIAM1Q13009 1591 aa14.63□□□□□ -0.07
EDC4-207ENST00000573992 RNF123Q5XPI4 1314 aa14.63□□□□□ -0.07
EDC4-207ENST00000573992 FHOD3Q2V2M9 1422 aa14.62□□□□□ -0.07
EDC4-207ENST00000573992 TRAK2O60296 914 aa14.62□□□□□ -0.07
EDC4-207ENST00000573992 MAP7D2Q96T17 732 aa14.62□□□□□ -0.07
EDC4-207ENST00000573992 HMGXB3Q12766 1538 aa14.61□□□□□ -0.07
EDC4-207ENST00000573992 NCOA1Q15788 1441 aa14.61□□□□□ -0.07
EDC4-207ENST00000573992 NBPF8Q3BBV2 869 aa14.6□□□□□ -0.07
EDC4-207ENST00000573992 PDCL3Q9H2J4 239 aa14.6□□□□□ -0.07
EDC4-207ENST00000573992 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.6□□□□□ -0.07
EDC4-207ENST00000573992 HFM1A2PYH4 1435 aa14.6□□□□□ -0.07
EDC4-207ENST00000573992 CDK11BP21127 795 aaKnown RBP14.6□□□□□ -0.07
EDC4-207ENST00000573992 ST20-MTHFSA0A0A6YYL1 179 aa14.58□□□□□ -0.08
EDC4-207ENST00000573992 MFAP1P55081 439 aaKnown RBP14.58□□□□□ -0.08
EDC4-207ENST00000573992 KIAA1211Q6ZU35 1233 aa14.57□□□□□ -0.08
EDC4-207ENST00000573992 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.57□□□□□ -0.084e-8■■□□□ 14.3
EDC4-207ENST00000573992 PMFBP1Q8TBY8 1022 aa14.57□□□□□ -0.08
EDC4-207ENST00000573992 GRPEL1Q9HAV7 217 aa14.57□□□□□ -0.08
EDC4-207ENST00000573992 MCM4P33991 863 aa14.57□□□□□ -0.08
EDC4-207ENST00000573992 RBM10P98175 930 aaKnown RBP14.57□□□□□ -0.08
EDC4-207ENST00000573992 SKOR2Q2VWA4 1001 aaPredicted RBP14.57□□□□□ -0.08
EDC4-207ENST00000573992 RGL3Q3MIN7 710 aa14.56□□□□□ -0.08
EDC4-207ENST00000573992 PKD2Q13563 968 aa14.56□□□□□ -0.08
EDC4-207ENST00000573992 ISY1Q9ULR0 285 aaKnown RBP14.56□□□□□ -0.08
EDC4-207ENST00000573992 XRCC6P12956 609 aaKnown RBP eCLIP14.55□□□□□ -0.08
EDC4-207ENST00000573992 FTSJ3Q8IY81 847 aaKnown RBP14.55□□□□□ -0.08
EDC4-207ENST00000573992 RWDD1Q9H446 243 aaPredicted RBP14.55□□□□□ -0.08
EDC4-207ENST00000573992 R3HCC1Q9Y3T6 440 aaKnown RBP14.54□□□□□ -0.08
EDC4-207ENST00000573992 CGNL1Q0VF96 1302 aa14.54□□□□□ -0.08
EDC4-207ENST00000573992 NEUROD2Q15784 382 aa14.53□□□□□ -0.08
EDC4-207ENST00000573992 MTERF4Q7Z6M4 381 aaKnown RBP14.53□□□□□ -0.08
EDC4-207ENST00000573992 MAP3K1Q13233 1512 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms