RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 MAGI2Q86UL8 1455 aa20.51■□□□□ 0.87
PRPF8-208ENST00000573716 CDK13Q14004 1512 aaKnown RBP20.51■□□□□ 0.87
PRPF8-208ENST00000573716 SCAPERQ9BY12 1400 aa20.5■□□□□ 0.87
PRPF8-208ENST00000573716 PREX1Q8TCU6 1659 aa20.48■□□□□ 0.87
PRPF8-208ENST00000573716 ATP1B4Q9UN42 357 aaPredicted RBP20.47■□□□□ 0.87
PRPF8-208ENST00000573716 CEBPAP49715 358 aaPredicted RBP20.45■□□□□ 0.86
PRPF8-208ENST00000573716 ATP10AO60312 1499 aa20.44■□□□□ 0.86
PRPF8-208ENST00000573716 DISP3Q9P2K9 1392 aa20.44■□□□□ 0.86
PRPF8-208ENST00000573716 PLCH2O75038 1416 aa20.44■□□□□ 0.86
PRPF8-208ENST00000573716 ARHGEF12Q9NZN5 1544 aa20.43■□□□□ 0.86
PRPF8-208ENST00000573716 MYO5CQ9NQX4 1742 aa20.43■□□□□ 0.86
PRPF8-208ENST00000573716 EEA1Q15075 1411 aa20.43■□□□□ 0.86
PRPF8-208ENST00000573716 C9orf84Q5VXU9 1444 aa20.43■□□□□ 0.86
PRPF8-208ENST00000573716 MYT1LQ9UL68 1186 aa20.42■□□□□ 0.86
PRPF8-208ENST00000573716 EHMT2Q96KQ7 1210 aa20.41■□□□□ 0.86
PRPF8-208ENST00000573716 EFCAB2Q5VUJ9 269 aa20.4■□□□□ 0.86
PRPF8-208ENST00000573716 STRCQ7RTU9 1775 aa20.37■□□□□ 0.85
PRPF8-208ENST00000573716 SENP3Q9H4L4 574 aaPredicted RBP20.37■□□□□ 0.85
PRPF8-208ENST00000573716 DMRT2Q9Y5R5 561 aa20.37■□□□□ 0.85
PRPF8-208ENST00000573716 ILDR2Q71H61 639 aa20.36■□□□□ 0.85
PRPF8-208ENST00000573716 UHRF1BP1Q6BDS2 1440 aa20.36■□□□□ 0.85
PRPF8-208ENST00000573716 KIF14Q15058 1648 aa20.35■□□□□ 0.85
PRPF8-208ENST00000573716 ARHGAP5Q13017 1502 aa20.34■□□□□ 0.85
PRPF8-208ENST00000573716 ZNF518AQ6AHZ1 1483 aa20.33■□□□□ 0.85
PRPF8-208ENST00000573716 CDK11AQ9UQ88 783 aaPredicted RBP20.33■□□□□ 0.85
PRPF8-208ENST00000573716 AFAP1Q8N556 730 aa20.32■□□□□ 0.84
PRPF8-208ENST00000573716 UBTFP17480 764 aaKnown RBP20.3■□□□□ 0.84
PRPF8-208ENST00000573716 SETD1BQ9UPS6 1966 aaKnown RBP20.3■□□□□ 0.84
PRPF8-208ENST00000573716 FMN1Q68DA7 1419 aa20.29■□□□□ 0.84
PRPF8-208ENST00000573716 SOCS7O14512 581 aa20.29■□□□□ 0.84
PRPF8-208ENST00000573716 ESF1Q9H501 851 aaKnown RBP20.29■□□□□ 0.84
PRPF8-208ENST00000573716 DIP2CQ9Y2E4 1556 aa20.29■□□□□ 0.84
PRPF8-208ENST00000573716 KDM5CP41229 1560 aa20.28■□□□□ 0.84
PRPF8-208ENST00000573716 C3P01024 1663 aa20.28■□□□□ 0.84
PRPF8-208ENST00000573716 SPATA31D1Q6ZQQ2 1576 aa20.26■□□□□ 0.83
PRPF8-208ENST00000573716 CLIP1P30622 1438 aa20.26■□□□□ 0.83
PRPF8-208ENST00000573716 ABCA6Q8N139 1617 aa20.25■□□□□ 0.83
PRPF8-208ENST00000573716 TROQ12816 1431 aaPredicted RBP20.25■□□□□ 0.83
PRPF8-208ENST00000573716 CDC42BPBQ9Y5S2 1711 aa20.22■□□□□ 0.83
PRPF8-208ENST00000573716 PTPRTO14522 1441 aa20.22■□□□□ 0.83
PRPF8-208ENST00000573716 ARHGAP35Q9NRY4 1499 aa20.22■□□□□ 0.83
PRPF8-208ENST00000573716 LRRIQ1Q96JM4 1722 aa20.21■□□□□ 0.83
PRPF8-208ENST00000573716 REREQ9P2R6 1566 aa20.21■□□□□ 0.83
PRPF8-208ENST00000573716 TRAPPC8Q9Y2L5 1435 aa20.18■□□□□ 0.82
PRPF8-208ENST00000573716 MLH3Q9UHC1 1453 aa20.18■□□□□ 0.82
PRPF8-208ENST00000573716 ITSN2Q9NZM3 1697 aa20.17■□□□□ 0.82
PRPF8-208ENST00000573716 PREX2Q70Z35 1606 aa20.16■□□□□ 0.82
PRPF8-208ENST00000573716 ABCC1P33527 1531 aa20.16■□□□□ 0.82
PRPF8-208ENST00000573716 LTBP4Q8N2S1 1624 aa20.16■□□□□ 0.82
PRPF8-208ENST00000573716 AGLP35573 1532 aa20.15■□□□□ 0.82
PRPF8-208ENST00000573716 NCOA1Q15788 1441 aa20.14■□□□□ 0.81
PRPF8-208ENST00000573716 KIDINS220Q9ULH0 1771 aa20.13■□□□□ 0.81
PRPF8-208ENST00000573716 CNTLNQ9NXG0 1405 aa20.12■□□□□ 0.81
PRPF8-208ENST00000573716 CAMSAP1Q5T5Y3 1602 aa20.12■□□□□ 0.81
PRPF8-208ENST00000573716 ZNF777Q9ULD5 760 aaPredicted RBP20.1■□□□□ 0.81
PRPF8-208ENST00000573716 CDC42BPAQ5VT25 1732 aa20.09■□□□□ 0.81
PRPF8-208ENST00000573716 IQSEC2Q5JU85 1478 aa20.09■□□□□ 0.81
PRPF8-208ENST00000573716 NCKAP5LQ9HCH0 1330 aa20.08■□□□□ 0.81
PRPF8-208ENST00000573716 SUPT6HQ7KZ85 1726 aaKnown RBP20.07■□□□□ 0.8
PRPF8-208ENST00000573716 MROH2AA6NES4 1674 aa20.07■□□□□ 0.8
PRPF8-208ENST00000573716 UBAP1LF5GYI3 381 aa20.06■□□□□ 0.8
PRPF8-208ENST00000573716 CCDC18Q5T9S5 1454 aa20.05■□□□□ 0.8
PRPF8-208ENST00000573716 ZNF335Q9H4Z2 1342 aaPredicted RBP20.04■□□□□ 0.8
PRPF8-208ENST00000573716 SAMD9LQ8IVG5 1584 aa20.04■□□□□ 0.8
PRPF8-208ENST00000573716 CLTCQ00610 1675 aaKnown RBP20.04■□□□□ 0.8
PRPF8-208ENST00000573716 NPATQ14207 1427 aa20.04■□□□□ 0.8
PRPF8-208ENST00000573716 ZMYM3Q14202 1370 aa20.04■□□□□ 0.8
PRPF8-208ENST00000573716 SPAG9O60271 1321 aaKnown RBP20.02■□□□□ 0.8
PRPF8-208ENST00000573716 SYCP2Q9BX26 1530 aa20.02■□□□□ 0.8
PRPF8-208ENST00000573716 CASKIN1Q8WXD9 1431 aa20.02■□□□□ 0.79
PRPF8-208ENST00000573716 HNRNPMP52272 730 aaKnown RBP eCLIP20■□□□□ 0.79
PRPF8-208ENST00000573716 MYO3AQ8NEV4 1616 aa20■□□□□ 0.79
PRPF8-208ENST00000573716 ZNF142P52746 1687 aaPredicted RBP19.97■□□□□ 0.79
PRPF8-208ENST00000573716 ATP7AQ04656 1500 aa19.97■□□□□ 0.79
PRPF8-208ENST00000573716 GGT6Q6P531 493 aa19.97■□□□□ 0.79
PRPF8-208ENST00000573716 CEP170BQ9Y4F5 1589 aaPredicted RBP19.96■□□□□ 0.79
PRPF8-208ENST00000573716 PKD2Q13563 968 aa19.96■□□□□ 0.79
PRPF8-208ENST00000573716 SCAF1Q9H7N4 1312 aaKnown RBP19.96■□□□□ 0.79
PRPF8-208ENST00000573716 A2MP01023 1474 aa19.93■□□□□ 0.78
PRPF8-208ENST00000573716 GPATCH8Q9UKJ3 1502 aaKnown RBP19.93■□□□□ 0.78
PRPF8-208ENST00000573716 PTPRKQ15262 1439 aa19.93■□□□□ 0.78
PRPF8-208ENST00000573716 PLA2R1Q13018 1463 aa19.92■□□□□ 0.78
PRPF8-208ENST00000573716 FYCO1Q9BQS8 1478 aa19.92■□□□□ 0.78
PRPF8-208ENST00000573716 INO80Q9ULG1 1556 aaPredicted RBP19.92■□□□□ 0.78
PRPF8-208ENST00000573716 PPP6R1Q9UPN7 881 aa19.92■□□□□ 0.78
PRPF8-208ENST00000573716 PLXNC1O60486 1568 aa19.91■□□□□ 0.78
PRPF8-208ENST00000573716 CFDP1Q9UEE9 299 aaPredicted RBP19.91■□□□□ 0.78
PRPF8-208ENST00000573716 TCOF1Q13428 1488 aaKnown RBP19.9■□□□□ 0.78
PRPF8-208ENST00000573716 PIP4K2BP78356 416 aa19.89■□□□□ 0.77
PRPF8-208ENST00000573716 PLEKHH2Q8IVE3 1493 aa19.88■□□□□ 0.77
PRPF8-208ENST00000573716 CCNB3Q8WWL7 1395 aa19.88■□□□□ 0.77
PRPF8-208ENST00000573716 ADGBQ8N7X0 1667 aa19.87■□□□□ 0.77
PRPF8-208ENST00000573716 KIAA1107Q9UPP5 1409 aa19.85■□□□□ 0.77
PRPF8-208ENST00000573716 HSPA1LP34931 641 aa19.85■□□□□ 0.77
PRPF8-208ENST00000573716 A2ML1A8K2U0 1454 aa19.85■□□□□ 0.77
PRPF8-208ENST00000573716 DNMT1P26358 1616 aaKnown RBP19.84■□□□□ 0.77
PRPF8-208ENST00000573716 POLR1AO95602 1720 aaPredicted RBP19.84■□□□□ 0.77
PRPF8-208ENST00000573716 MED1Q15648 1581 aaPredicted RBP19.83■□□□□ 0.77
PRPF8-208ENST00000573716 MTUS2Q5JR59 1369 aa19.82■□□□□ 0.76
PRPF8-208ENST00000573716 ZNF644Q9H582 1327 aaPredicted RBP19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms