RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 ABCC5O15440 1437 aa15.73■□□□□ 0.11
RPAIN-212ENST00000573126 EIF4G3O43432 1585 aaKnown RBP15.72■□□□□ 0.11
RPAIN-212ENST00000573126 CHMP7Q8WUX9 453 aaPredicted RBP15.72■□□□□ 0.11
RPAIN-212ENST00000573126 PRG4Q92954 1404 aaPredicted RBP15.71■□□□□ 0.11
RPAIN-212ENST00000573126 EIF4G2P78344 907 aaKnown RBP eCLIP15.71■□□□□ 0.11
RPAIN-212ENST00000573126 ERCC6Q03468 1493 aa15.7■□□□□ 0.1
RPAIN-212ENST00000573126 RAPGEF6Q8TEU7 1601 aa15.7■□□□□ 0.1
RPAIN-212ENST00000573126 ROCK1Q13464 1354 aa15.7■□□□□ 0.1
RPAIN-212ENST00000573126 SLC4A1APQ9BWU0 796 aaKnown RBP15.69■□□□□ 0.1
RPAIN-212ENST00000573126 PLB1Q6P1J6 1458 aa15.68■□□□□ 0.1
RPAIN-212ENST00000573126 CFDP1Q9UEE9 299 aaPredicted RBP15.68■□□□□ 0.1
RPAIN-212ENST00000573126 ZNF777Q9ULD5 760 aaPredicted RBP15.68■□□□□ 0.1
RPAIN-212ENST00000573126 ANKRD30BQ9BXX2 1392 aa15.68■□□□□ 0.1
RPAIN-212ENST00000573126 DNMT1P26358 1616 aaKnown RBP15.67■□□□□ 0.1
RPAIN-212ENST00000573126 TSHZ2Q9NRE2 1034 aa15.66■□□□□ 0.1
RPAIN-212ENST00000573126 TROQ12816 1431 aaPredicted RBP15.65■□□□□ 0.1
RPAIN-212ENST00000573126 NBPF8Q3BBV2 869 aa15.65■□□□□ 0.1
RPAIN-212ENST00000573126 NEFLP07196 543 aa15.65■□□□□ 0.1
RPAIN-212ENST00000573126 C11orf95C9JLR9 678 aaPredicted RBP15.64■□□□□ 0.09
RPAIN-212ENST00000573126 RPRD2Q5VT52 1461 aaKnown RBP15.64■□□□□ 0.09
RPAIN-212ENST00000573126 CEP170Q5SW79 1584 aa15.64■□□□□ 0.09
RPAIN-212ENST00000573126 MAGI1Q96QZ7 1491 aaPredicted RBP15.64■□□□□ 0.09
RPAIN-212ENST00000573126 HNRNPUQ00839 825 aaKnown RBP eCLIP15.63■□□□□ 0.09
RPAIN-212ENST00000573126 JPH4Q96JJ6 628 aa15.63■□□□□ 0.09
RPAIN-212ENST00000573126 SYNJ2O15056 1496 aa15.62■□□□□ 0.09
RPAIN-212ENST00000573126 CAMSAP2Q08AD1 1489 aa15.62■□□□□ 0.09
RPAIN-212ENST00000573126 TEX14Q8IWB6 1497 aa15.61■□□□□ 0.09
RPAIN-212ENST00000573126 GPATCH8Q9UKJ3 1502 aaKnown RBP15.6■□□□□ 0.09
RPAIN-212ENST00000573126 NCOA1Q15788 1441 aa15.59■□□□□ 0.09
RPAIN-212ENST00000573126 KIF14Q15058 1648 aa15.59■□□□□ 0.09
RPAIN-212ENST00000573126 CARMIL2Q6F5E8 1435 aa15.59■□□□□ 0.09
RPAIN-212ENST00000573126 CNTLNQ9NXG0 1405 aa15.59■□□□□ 0.09
RPAIN-212ENST00000573126 CCDC184Q52MB2 194 aa15.58■□□□□ 0.08
RPAIN-212ENST00000573126 CCDC7Q96M83 1385 aa15.58■□□□□ 0.08
RPAIN-212ENST00000573126 PZPP20742 1482 aa15.57■□□□□ 0.08
RPAIN-212ENST00000573126 ZNF326Q5BKZ1 582 aaKnown RBP15.55■□□□□ 0.08
RPAIN-212ENST00000573126 NUP160Q12769 1436 aa15.55■□□□□ 0.08
RPAIN-212ENST00000573126 PLEKHD1A6NEE1 506 aa15.54■□□□□ 0.08
RPAIN-212ENST00000573126 PKD2Q13563 968 aa15.54■□□□□ 0.08
RPAIN-212ENST00000573126 PRKRIP1Q9H875 184 aaPredicted RBP15.54■□□□□ 0.08
RPAIN-212ENST00000573126 KIF7Q2M1P5 1343 aa15.53■□□□□ 0.08
RPAIN-212ENST00000573126 ITSN2Q9NZM3 1697 aa15.53■□□□□ 0.08
RPAIN-212ENST00000573126 ANKRD30AQ9BXX3 1397 aa15.53■□□□□ 0.08
RPAIN-212ENST00000573126 SPATA31E1Q6ZUB1 1445 aa15.52■□□□□ 0.08
RPAIN-212ENST00000573126 FAM9BQ8IZU0 186 aa15.52■□□□□ 0.07
RPAIN-212ENST00000573126 ANKRD50Q9ULJ7 1429 aa15.51■□□□□ 0.07
RPAIN-212ENST00000573126 KIAA1107Q9UPP5 1409 aa15.51■□□□□ 0.07
RPAIN-212ENST00000573126 ADGRL2O95490 1459 aa15.5■□□□□ 0.07
RPAIN-212ENST00000573126 IRX6P78412 446 aaPredicted RBP15.5■□□□□ 0.07
RPAIN-212ENST00000573126 MRS2Q9HD23 443 aa15.5■□□□□ 0.07
RPAIN-212ENST00000573126 ADCY10Q96PN6 1610 aa15.49■□□□□ 0.07
RPAIN-212ENST00000573126 CNGB1Q14028 1251 aaPredicted RBP15.49■□□□□ 0.07
RPAIN-212ENST00000573126 POLR3GLQ9BT43 218 aa15.49■□□□□ 0.07
RPAIN-212ENST00000573126 ATP10BO94823 1461 aa15.49■□□□□ 0.07
RPAIN-212ENST00000573126 ADGBQ8N7X0 1667 aa15.47■□□□□ 0.07
RPAIN-212ENST00000573126 NUP155O75694 1391 aa15.47■□□□□ 0.07
RPAIN-212ENST00000573126 C9orf84Q5VXU9 1444 aa15.46■□□□□ 0.07
RPAIN-212ENST00000573126 ABCA8O94911 1581 aa15.46■□□□□ 0.07
RPAIN-212ENST00000573126 CROCC2H7BZ55 1655 aa15.46■□□□□ 0.06
RPAIN-212ENST00000573126 TSPY4P0CV99 314 aa15.45■□□□□ 0.06
RPAIN-212ENST00000573126 TSPY10P0CW01 314 aa15.45■□□□□ 0.06
RPAIN-212ENST00000573126 HNRNPMP52272 730 aaKnown RBP eCLIP15.45■□□□□ 0.06
RPAIN-212ENST00000573126 MYT1Q01538 1121 aa15.45■□□□□ 0.06
RPAIN-212ENST00000573126 ABCC10Q5T3U5 1492 aa15.45■□□□□ 0.06
RPAIN-212ENST00000573126 USP47Q96K76 1375 aa15.45■□□□□ 0.06
RPAIN-212ENST00000573126 MBD5Q9P267 1494 aa15.45■□□□□ 0.06
RPAIN-212ENST00000573126 CDC42BPAQ5VT25 1732 aa15.43■□□□□ 0.06
RPAIN-212ENST00000573126 KIF15Q9NS87 1388 aa15.41■□□□□ 0.06
RPAIN-212ENST00000573126 PTPRGP23470 1445 aa15.41■□□□□ 0.06
RPAIN-212ENST00000573126 KDM2AQ9Y2K7 1162 aa15.4■□□□□ 0.06
RPAIN-212ENST00000573126 SHANK2Q9UPX8 1470 aa15.4■□□□□ 0.06
RPAIN-212ENST00000573126 CARD11Q9BXL7 1154 aa15.38■□□□□ 0.05
RPAIN-212ENST00000573126 RBM19Q9Y4C8 960 aaKnown RBP15.38■□□□□ 0.05
RPAIN-212ENST00000573126 DHX29Q7Z478 1369 aaKnown RBP15.37■□□□□ 0.05
RPAIN-212ENST00000573126 ZBED9Q6R2W3 1325 aa15.37■□□□□ 0.05
RPAIN-212ENST00000573126 BCORL1Q5H9F3 1711 aa15.37■□□□□ 0.05
RPAIN-212ENST00000573126 DCAF11Q8TEB1 546 aa15.36■□□□□ 0.05
RPAIN-212ENST00000573126 POLR1AO95602 1720 aaPredicted RBP15.35■□□□□ 0.05
RPAIN-212ENST00000573126 KDM5CP41229 1560 aa15.34■□□□□ 0.05
RPAIN-212ENST00000573126 UHRF1BP1Q6BDS2 1440 aa15.33■□□□□ 0.04
RPAIN-212ENST00000573126 SENP3-EIF4A1A0A087X0R7 540 aa15.33■□□□□ 0.04
RPAIN-212ENST00000573126 ST20-MTHFSA0A0A6YYL1 179 aa15.33■□□□□ 0.04
RPAIN-212ENST00000573126 RALGAPBQ86X10 1494 aa15.32■□□□□ 0.04
RPAIN-212ENST00000573126 CCDC141Q6ZP82 1450 aa15.32■□□□□ 0.04
RPAIN-212ENST00000573126 KDM5DQ9BY66 1539 aa15.31■□□□□ 0.04
RPAIN-212ENST00000573126 SAMD9LQ8IVG5 1584 aa15.31■□□□□ 0.04
RPAIN-212ENST00000573126 ARHGEF5Q12774 1597 aa15.3■□□□□ 0.04
RPAIN-212ENST00000573126 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.3■□□□□ 0.042e-6■□□□□ 10.3
RPAIN-212ENST00000573126 ARHGEF12Q9NZN5 1544 aa15.3■□□□□ 0.04
RPAIN-212ENST00000573126 ARID4BQ4LE39 1312 aaPredicted RBP15.29■□□□□ 0.04
RPAIN-212ENST00000573126 RGL3Q3MIN7 710 aa15.29■□□□□ 0.04
RPAIN-212ENST00000573126 FAM135AQ9P2D6 1515 aa15.28■□□□□ 0.04
RPAIN-212ENST00000573126 ROCK2O75116 1388 aaKnown RBP15.28■□□□□ 0.04
RPAIN-212ENST00000573126 SYCP2Q9BX26 1530 aa15.27■□□□□ 0.04
RPAIN-212ENST00000573126 PPP4R2Q9NY27 417 aa15.27■□□□□ 0.04
RPAIN-212ENST00000573126 CDC42BPBQ9Y5S2 1711 aa15.27■□□□□ 0.04
RPAIN-212ENST00000573126 RSPH4AQ5TD94 716 aa15.27■□□□□ 0.03
RPAIN-212ENST00000573126 ANP32EQ9BTT0 268 aa15.27■□□□□ 0.03
RPAIN-212ENST00000573126 PREX2Q70Z35 1606 aa15.26■□□□□ 0.03
RPAIN-212ENST00000573126 ARHGAP5Q13017 1502 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms