RNA–Protein interactions for RNA: ENST00000573035.5

GTF2I-212, Transcript of general transcription factor IIi, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene GTF2I, Length 4,548 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-212ENST00000573035 STK26Q9P289 416 aa18.79■□□□□ 0.6
GTF2I-212ENST00000573035 PKD2Q13563 968 aa18.79■□□□□ 0.6
GTF2I-212ENST00000573035 RUSC2Q8N2Y8 1516 aa18.78■□□□□ 0.6
GTF2I-212ENST00000573035 VPS8Q8N3P4 1428 aa18.77■□□□□ 0.6
GTF2I-212ENST00000573035 KNSTRNQ9Y448 316 aa18.77■□□□□ 0.59
GTF2I-212ENST00000573035 NEUROD2Q15784 382 aa18.76■□□□□ 0.59
GTF2I-212ENST00000573035 CDK11BP21127 795 aaKnown RBP18.75■□□□□ 0.59
GTF2I-212ENST00000573035 KANK1Q14678 1352 aa18.75■□□□□ 0.59
GTF2I-212ENST00000573035 DNAJC5BQ9UF47 199 aa18.74■□□□□ 0.59
GTF2I-212ENST00000573035 RAPGEF2Q9Y4G8 1499 aa18.74■□□□□ 0.59
GTF2I-212ENST00000573035 MSNP26038 577 aaKnown RBP18.73■□□□□ 0.59
GTF2I-212ENST00000573035 MYH16Q9H6N6 1097 aa18.73■□□□□ 0.59
GTF2I-212ENST00000573035 FMN1Q68DA7 1419 aa18.73■□□□□ 0.59
GTF2I-212ENST00000573035 NUTM2DQ5VT03 806 aaPredicted RBP18.72■□□□□ 0.59
GTF2I-212ENST00000573035 RAD54L2Q9Y4B4 1467 aa18.72■□□□□ 0.59
GTF2I-212ENST00000573035 HSP90AA2PQ14568 343 aaPredicted RBP18.69■□□□□ 0.58
GTF2I-212ENST00000573035 SRPK2P78362 688 aaKnown RBP18.69■□□□□ 0.58
GTF2I-212ENST00000573035 CDCA8Q53HL2 280 aa18.69■□□□□ 0.58
GTF2I-212ENST00000573035 NUP155O75694 1391 aa18.68■□□□□ 0.58
GTF2I-212ENST00000573035 ARHGAP35Q9NRY4 1499 aa18.68■□□□□ 0.58
GTF2I-212ENST00000573035 PTPRGP23470 1445 aa18.68■□□□□ 0.58
GTF2I-212ENST00000573035 SETD5Q9C0A6 1442 aa18.68■□□□□ 0.58
GTF2I-212ENST00000573035 GSE1Q14687 1217 aa18.68■□□□□ 0.58
GTF2I-212ENST00000573035 SPAG9O60271 1321 aaKnown RBP18.68■□□□□ 0.58
GTF2I-212ENST00000573035 AQRO60306 1485 aaKnown RBP eCLIP18.67■□□□□ 0.589e-7■■■□□ 15.4
GTF2I-212ENST00000573035 CC2D1BQ5T0F9 858 aaKnown RBP18.66■□□□□ 0.58
GTF2I-212ENST00000573035 NUDCQ9Y266 331 aa18.66■□□□□ 0.58
GTF2I-212ENST00000573035 PRKCSHP14314 528 aaPredicted RBP18.64■□□□□ 0.57
GTF2I-212ENST00000573035 HSCBQ8IWL3 235 aa18.64■□□□□ 0.57
GTF2I-212ENST00000573035 CFAP53Q96M91 514 aa18.64■□□□□ 0.57
GTF2I-212ENST00000573035 HDGFP51858 240 aaKnown RBP18.63■□□□□ 0.57
GTF2I-212ENST00000573035 WASHC2CQ9Y4E1 1318 aa18.63■□□□□ 0.57
GTF2I-212ENST00000573035 PTMSP20962 102 aa18.63■□□□□ 0.57
GTF2I-212ENST00000573035 NESP48681 1621 aa18.63■□□□□ 0.57
GTF2I-212ENST00000573035 GOLGA6L3A6NEY3 463 aa18.63■□□□□ 0.57
GTF2I-212ENST00000573035 VSIG10Q8N0Z9 540 aa18.63■□□□□ 0.57
GTF2I-212ENST00000573035 FGD5Q6ZNL6 1462 aa18.63■□□□□ 0.57
GTF2I-212ENST00000573035 HSP90AB1P08238 724 aaKnown RBP18.62■□□□□ 0.57
GTF2I-212ENST00000573035 RCAN3Q9UKA8 241 aa18.62■□□□□ 0.57
GTF2I-212ENST00000573035 HSPA5P11021 654 aaKnown RBP18.62■□□□□ 0.57
GTF2I-212ENST00000573035 NCAPD3P42695 1498 aa18.61■□□□□ 0.57
GTF2I-212ENST00000573035 U2SURPO15042 1029 aaKnown RBP18.61■□□□□ 0.57
GTF2I-212ENST00000573035 MPHOSPH9Q99550 1183 aa18.6■□□□□ 0.57
GTF2I-212ENST00000573035 GAPVD1Q14C86 1478 aa18.59■□□□□ 0.57
GTF2I-212ENST00000573035 NUTM2FA1L443 756 aa18.59■□□□□ 0.57
GTF2I-212ENST00000573035 FAM69CQ0P6D2 419 aa18.58■□□□□ 0.57
GTF2I-212ENST00000573035 IGF1RP08069 1367 aa18.58■□□□□ 0.57
GTF2I-212ENST00000573035 CHAF1AQ13111 956 aaPredicted RBP18.58■□□□□ 0.56
GTF2I-212ENST00000573035 MS4A1P11836 297 aa18.57■□□□□ 0.56
GTF2I-212ENST00000573035 FTSJ3Q8IY81 847 aaKnown RBP18.57■□□□□ 0.56
GTF2I-212ENST00000573035 ANKRD30AQ9BXX3 1397 aa18.56■□□□□ 0.56
GTF2I-212ENST00000573035 RAB3GAP2Q9H2M9 1393 aa18.56■□□□□ 0.56
GTF2I-212ENST00000573035 GBP4Q96PP9 640 aa18.56■□□□□ 0.56
GTF2I-212ENST00000573035 PAK3O75914 559 aaPredicted RBP18.55■□□□□ 0.56
GTF2I-212ENST00000573035 DHX57Q6P158 1386 aaKnown RBP18.55■□□□□ 0.56
GTF2I-212ENST00000573035 TMF1P82094 1093 aa18.55■□□□□ 0.56
GTF2I-212ENST00000573035 CASC1Q6TDU7 716 aa18.54■□□□□ 0.56
GTF2I-212ENST00000573035 PDE4AP27815 886 aa18.53■□□□□ 0.56
GTF2I-212ENST00000573035 SLKQ9H2G2 1235 aaPredicted RBP18.53■□□□□ 0.56
GTF2I-212ENST00000573035 MAPK8IP3Q9UPT6 1336 aa18.51■□□□□ 0.55
GTF2I-212ENST00000573035 PDE3BQ13370 1112 aa18.51■□□□□ 0.55
GTF2I-212ENST00000573035 CHMP4BQ9H444 224 aaKnown RBP18.51■□□□□ 0.55
GTF2I-212ENST00000573035 ANO8Q9HCE9 1232 aaPredicted RBP18.51■□□□□ 0.55
GTF2I-212ENST00000573035 GZF1Q9H116 711 aaPredicted RBP18.5■□□□□ 0.55
GTF2I-212ENST00000573035 FRAT1Q92837 279 aaPredicted RBP18.49■□□□□ 0.55
GTF2I-212ENST00000573035 ZBED9Q6R2W3 1325 aa18.49■□□□□ 0.55
GTF2I-212ENST00000573035 CCDC18Q5T9S5 1454 aa18.47■□□□□ 0.55
GTF2I-212ENST00000573035 RALBP1Q15311 655 aa18.45■□□□□ 0.54
GTF2I-212ENST00000573035 ZNF644Q9H582 1327 aaPredicted RBP18.45■□□□□ 0.54
GTF2I-212ENST00000573035 PLCB2Q00722 1185 aa18.44■□□□□ 0.54
GTF2I-212ENST00000573035 RSPH4AQ5TD94 716 aa18.44■□□□□ 0.54
GTF2I-212ENST00000573035 L3MBTL2Q969R5 705 aa18.44■□□□□ 0.54
GTF2I-212ENST00000573035 EID1Q9Y6B2 187 aa18.44■□□□□ 0.54
GTF2I-212ENST00000573035 CFAP44Q96MT7 982 aa18.44■□□□□ 0.54
GTF2I-212ENST00000573035 KIAA2012Q0VF49 1180 aa18.44■□□□□ 0.54
GTF2I-212ENST00000573035 MORC1Q86VD1 984 aa18.43■□□□□ 0.54
GTF2I-212ENST00000573035 SPRYD3Q8NCJ5 442 aa18.43■□□□□ 0.54
GTF2I-212ENST00000573035 CC2D2AQ9P2K1 1620 aa18.42■□□□□ 0.54
GTF2I-212ENST00000573035 TRAK1Q9UPV9 953 aa18.42■□□□□ 0.54
GTF2I-212ENST00000573035 ZRSR1Q15695 479 aaKnown RBP18.4■□□□□ 0.54
GTF2I-212ENST00000573035 FAM161AQ3B820 660 aa18.39■□□□□ 0.54
GTF2I-212ENST00000573035 KTN1Q86UP2 1357 aaKnown RBP18.39■□□□□ 0.53
GTF2I-212ENST00000573035 NRDCO43847 1150 aa18.39■□□□□ 0.53
GTF2I-212ENST00000573035 NPHP1O15259 732 aa18.39■□□□□ 0.53
GTF2I-212ENST00000573035 ROCK2O75116 1388 aaKnown RBP18.38■□□□□ 0.53
GTF2I-212ENST00000573035 PKNOX2Q96KN3 472 aa18.38■□□□□ 0.53
GTF2I-212ENST00000573035 GOLGA6L6A8MZA4 724 aa18.37■□□□□ 0.53
GTF2I-212ENST00000573035 DDX11L8A8MPP1 907 aa18.37■□□□□ 0.53
GTF2I-212ENST00000573035 CSB-PGBD3P0DP91 1061 aa18.36■□□□□ 0.53
GTF2I-212ENST00000573035 CENPQQ7L2Z9 268 aaPredicted RBP18.36■□□□□ 0.53
GTF2I-212ENST00000573035 HDGFL2Q7Z4V5 671 aaPredicted RBP18.36■□□□□ 0.53
GTF2I-212ENST00000573035 AFAP1Q8N556 730 aa18.36■□□□□ 0.53
GTF2I-212ENST00000573035 RWDD1Q9H446 243 aaPredicted RBP18.36■□□□□ 0.53
GTF2I-212ENST00000573035 PRKRIP1Q9H875 184 aaPredicted RBP18.35■□□□□ 0.53
GTF2I-212ENST00000573035 NGDNQ8NEJ9 315 aaKnown RBP18.34■□□□□ 0.53
GTF2I-212ENST00000573035 PMFBP1Q8TBY8 1022 aa18.33■□□□□ 0.53
GTF2I-212ENST00000573035 CCDC9Q9Y3X0 531 aaKnown RBP18.33■□□□□ 0.53
GTF2I-212ENST00000573035 IL27Q8NEV9 243 aa18.33■□□□□ 0.52
GTF2I-212ENST00000573035 CFTRP13569 1480 aa18.32■□□□□ 0.52
GTF2I-212ENST00000573035 RRP1P56182 461 aaKnown RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms