RNA–Protein interactions for RNA: ENST00000572844.1

POLR2A-201, Transcript of RNA polymerase II subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2A, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-201ENST00000572844 CHIC2Q9UKJ5 165 aa23.37■■□□□ 1.33
POLR2A-201ENST00000572844 ADGBQ8N7X0 1667 aa23.37■■□□□ 1.33
POLR2A-201ENST00000572844 GPATCH8Q9UKJ3 1502 aaKnown RBP23.37■■□□□ 1.33
POLR2A-201ENST00000572844 DENND4BO75064 1496 aaPredicted RBP23.36■■□□□ 1.33
POLR2A-201ENST00000572844 CAMSAP2Q08AD1 1489 aa23.35■■□□□ 1.33
POLR2A-201ENST00000572844 CROCC2H7BZ55 1655 aa23.35■■□□□ 1.33
POLR2A-201ENST00000572844 SHROOM2Q13796 1616 aa23.32■■□□□ 1.32
POLR2A-201ENST00000572844 KDM5BQ9UGL1 1544 aa23.32■■□□□ 1.32
POLR2A-201ENST00000572844 ATP10BO94823 1461 aa23.32■■□□□ 1.32
POLR2A-201ENST00000572844 CDC42BPAQ5VT25 1732 aa23.32■■□□□ 1.32
POLR2A-201ENST00000572844 ADGRL2O95490 1459 aa23.3■■□□□ 1.32
POLR2A-201ENST00000572844 ABCC10Q5T3U5 1492 aa23.29■■□□□ 1.32
POLR2A-201ENST00000572844 CFDP1Q9UEE9 299 aaPredicted RBP23.28■■□□□ 1.32
POLR2A-201ENST00000572844 ZNF644Q9H582 1327 aaPredicted RBP23.28■■□□□ 1.32
POLR2A-201ENST00000572844 PLEKHD1A6NEE1 506 aa23.26■■□□□ 1.31
POLR2A-201ENST00000572844 TRIM52Q96A61 297 aa23.26■■□□□ 1.31
POLR2A-201ENST00000572844 YTHDC1Q96MU7 727 aaKnown RBP23.26■■□□□ 1.31
POLR2A-201ENST00000572844 MPHOSPH9Q99550 1183 aa23.26■■□□□ 1.31
POLR2A-201ENST00000572844 PTPRGP23470 1445 aa23.24■■□□□ 1.31
POLR2A-201ENST00000572844 NCOA1Q15788 1441 aa23.22■■□□□ 1.31
POLR2A-201ENST00000572844 GTF3C3Q9Y5Q9 886 aa23.21■■□□□ 1.31
POLR2A-201ENST00000572844 SHANK2Q9UPX8 1470 aa23.21■■□□□ 1.31
POLR2A-201ENST00000572844 ANKRD30BQ9BXX2 1392 aa23.17■■□□□ 1.3
POLR2A-201ENST00000572844 ANKRD30AQ9BXX3 1397 aa23.16■■□□□ 1.3
POLR2A-201ENST00000572844 ARHGEF5Q12774 1597 aa23.15■■□□□ 1.3
POLR2A-201ENST00000572844 RPRD2Q5VT52 1461 aaKnown RBP23.15■■□□□ 1.3
POLR2A-201ENST00000572844 PREX2Q70Z35 1606 aa23.13■■□□□ 1.29
POLR2A-201ENST00000572844 PZPP20742 1482 aa23.13■■□□□ 1.29
POLR2A-201ENST00000572844 DDX10Q13206 875 aaKnown RBP23.1■■□□□ 1.29
POLR2A-201ENST00000572844 CDC42BPBQ9Y5S2 1711 aa23.1■■□□□ 1.29
POLR2A-201ENST00000572844 ZNF777Q9ULD5 760 aaPredicted RBP23.09■■□□□ 1.29
POLR2A-201ENST00000572844 ABCC2Q92887 1545 aa23.08■■□□□ 1.29
POLR2A-201ENST00000572844 CLASP1Q7Z460 1538 aa23.08■■□□□ 1.28
POLR2A-201ENST00000572844 C9orf84Q5VXU9 1444 aa23.07■■□□□ 1.28
POLR2A-201ENST00000572844 TEX14Q8IWB6 1497 aa23.06■■□□□ 1.28
POLR2A-201ENST00000572844 SLC4A1APQ9BWU0 796 aaKnown RBP23.06■■□□□ 1.28
POLR2A-201ENST00000572844 ANKRD50Q9ULJ7 1429 aa23.05■■□□□ 1.28
POLR2A-201ENST00000572844 KDM5DQ9BY66 1539 aa23.05■■□□□ 1.28
POLR2A-201ENST00000572844 SAMD9LQ8IVG5 1584 aa23.04■■□□□ 1.28
POLR2A-201ENST00000572844 MBD5Q9P267 1494 aa23.04■■□□□ 1.28
POLR2A-201ENST00000572844 KIAA1107Q9UPP5 1409 aa23.03■■□□□ 1.28
POLR2A-201ENST00000572844 L3MBTL2Q969R5 705 aa23.02■■□□□ 1.28
POLR2A-201ENST00000572844 ERCC6L2Q5T890 1561 aa23.02■■□□□ 1.28
POLR2A-201ENST00000572844 RSPH4AQ5TD94 716 aa23.01■■□□□ 1.27
POLR2A-201ENST00000572844 FOXD1Q16676 465 aa23.01■■□□□ 1.27
POLR2A-201ENST00000572844 HIRIP3Q9BW71 556 aaPredicted RBP23■■□□□ 1.27
POLR2A-201ENST00000572844 UHRF1BP1LA0JNW5 1464 aa22.99■■□□□ 1.27
POLR2A-201ENST00000572844 CCDC141Q6ZP82 1450 aa22.99■■□□□ 1.27
POLR2A-201ENST00000572844 MAST1Q9Y2H9 1570 aa22.99■■□□□ 1.27
POLR2A-201ENST00000572844 CCER2I3L3R5 266 aa22.99■■□□□ 1.27
POLR2A-201ENST00000572844 TSPY4P0CV99 314 aa22.99■■□□□ 1.27
POLR2A-201ENST00000572844 TSPY10P0CW01 314 aa22.99■■□□□ 1.27
POLR2A-201ENST00000572844 MYO5CQ9NQX4 1742 aa22.99■■□□□ 1.27
POLR2A-201ENST00000572844 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.97■■□□□ 1.27
POLR2A-201ENST00000572844 TTC37Q6PGP7 1564 aa22.97■■□□□ 1.27
POLR2A-201ENST00000572844 EIF4G2P78344 907 aaKnown RBP eCLIP22.95■■□□□ 1.26
POLR2A-201ENST00000572844 ANP32CO43423 234 aa22.94■■□□□ 1.26
POLR2A-201ENST00000572844 HSPA5P11021 654 aaKnown RBP22.94■■□□□ 1.26
POLR2A-201ENST00000572844 PLEKHH2Q8IVE3 1493 aa22.93■■□□□ 1.26
POLR2A-201ENST00000572844 POLR1AO95602 1720 aaPredicted RBP22.93■■□□□ 1.26
POLR2A-201ENST00000572844 ZCCHC11Q5TAX3 1644 aaKnown RBP22.92■■□□□ 1.26
POLR2A-201ENST00000572844 KIF15Q9NS87 1388 aa22.92■■□□□ 1.26
POLR2A-201ENST00000572844 ARHGAP5Q13017 1502 aa22.9■■□□□ 1.26
POLR2A-201ENST00000572844 HNRNPMP52272 730 aaKnown RBP eCLIP22.9■■□□□ 1.26
POLR2A-201ENST00000572844 PKD2Q13563 968 aa22.88■■□□□ 1.25
POLR2A-201ENST00000572844 SYCP2Q9BX26 1530 aa22.88■■□□□ 1.25
POLR2A-201ENST00000572844 PLXNC1O60486 1568 aa22.88■■□□□ 1.25
POLR2A-201ENST00000572844 NUP155O75694 1391 aa22.88■■□□□ 1.25
POLR2A-201ENST00000572844 NBPF8Q3BBV2 869 aa22.87■■□□□ 1.25
POLR2A-201ENST00000572844 KCNH8Q96L42 1107 aa22.86■■□□□ 1.25
POLR2A-201ENST00000572844 SPATA31E1Q6ZUB1 1445 aa22.85■■□□□ 1.25
POLR2A-201ENST00000572844 WASHC2AQ641Q2 1341 aa22.85■■□□□ 1.25
POLR2A-201ENST00000572844 UNC13BO14795 1591 aa22.85■■□□□ 1.25
POLR2A-201ENST00000572844 ARHGEF12Q9NZN5 1544 aa22.84■■□□□ 1.25
POLR2A-201ENST00000572844 PLCH2O75038 1416 aa22.82■■□□□ 1.24
POLR2A-201ENST00000572844 UHRF1BP1Q6BDS2 1440 aa22.81■■□□□ 1.24
POLR2A-201ENST00000572844 ARAP3Q8WWN8 1544 aa22.8■■□□□ 1.24
POLR2A-201ENST00000572844 FAM135AQ9P2D6 1515 aa22.79■■□□□ 1.24
POLR2A-201ENST00000572844 CNTLNQ9NXG0 1405 aa22.79■■□□□ 1.24
POLR2A-201ENST00000572844 CCDC7Q96M83 1385 aa22.79■■□□□ 1.24
POLR2A-201ENST00000572844 PELP1Q8IZL8 1130 aaKnown RBP22.77■■□□□ 1.23
POLR2A-201ENST00000572844 DUOX2Q9NRD8 1548 aa22.75■■□□□ 1.23
POLR2A-201ENST00000572844 IQGAP3Q86VI3 1631 aa22.75■■□□□ 1.23
POLR2A-201ENST00000572844 ABCC1P33527 1531 aa22.75■■□□□ 1.23
POLR2A-201ENST00000572844 RALGAPBQ86X10 1494 aa22.73■■□□□ 1.23
POLR2A-201ENST00000572844 KDM5CP41229 1560 aa22.72■■□□□ 1.23
POLR2A-201ENST00000572844 MAGI2Q86UL8 1455 aa22.72■■□□□ 1.23
POLR2A-201ENST00000572844 EFCAB2Q5VUJ9 269 aa22.72■■□□□ 1.23
POLR2A-201ENST00000572844 ERBINQ96RT1 1412 aa22.71■■□□□ 1.23
POLR2A-201ENST00000572844 C11orf95C9JLR9 678 aaPredicted RBP22.69■■□□□ 1.22
POLR2A-201ENST00000572844 ARID4BQ4LE39 1312 aaPredicted RBP22.66■■□□□ 1.22
POLR2A-201ENST00000572844 KIF7Q2M1P5 1343 aa22.65■■□□□ 1.22
POLR2A-201ENST00000572844 USP47Q96K76 1375 aa22.65■■□□□ 1.22
POLR2A-201ENST00000572844 WDR7Q9Y4E6 1490 aa22.64■■□□□ 1.22
POLR2A-201ENST00000572844 BCORL1Q5H9F3 1711 aa22.64■■□□□ 1.21
POLR2A-201ENST00000572844 RTEL1-TNFRSF6BF6WH68 1400 aa22.64■■□□□ 1.21
POLR2A-201ENST00000572844 ATP10AO60312 1499 aa22.63■■□□□ 1.21
POLR2A-201ENST00000572844 ABCA9Q8IUA7 1624 aa22.63■■□□□ 1.21
POLR2A-201ENST00000572844 CCDC144AA2RUR9 1427 aa22.61■■□□□ 1.21
POLR2A-201ENST00000572844 TRAPPC8Q9Y2L5 1435 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms