RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 PLPPR3Q6T4P5 718 aa22.25■■□□□ 1.15
RPAIN-209ENST00000571558 ATP10AO60312 1499 aa22.24■■□□□ 1.15
RPAIN-209ENST00000571558 RANGAP1P46060 587 aaPredicted RBP22.23■■□□□ 1.15
RPAIN-209ENST00000571558 MLECQ14165 292 aa22.23■■□□□ 1.15
RPAIN-209ENST00000571558 ARHGEF12Q9NZN5 1544 aa22.22■■□□□ 1.15
RPAIN-209ENST00000571558 FER1L4A9Z1Z3 1794 aa22.22■■□□□ 1.15
RPAIN-209ENST00000571558 SIGLEC1Q9BZZ2 1709 aa22.22■■□□□ 1.15
RPAIN-209ENST00000571558 EHMT2Q96KQ7 1210 aa22.22■■□□□ 1.15
RPAIN-209ENST00000571558 EFCAB2Q5VUJ9 269 aa22.21■■□□□ 1.15
RPAIN-209ENST00000571558 C9orf84Q5VXU9 1444 aa22.21■■□□□ 1.15
RPAIN-209ENST00000571558 PREX1Q8TCU6 1659 aa22.18■■□□□ 1.14
RPAIN-209ENST00000571558 CDK11AQ9UQ88 783 aaPredicted RBP22.16■■□□□ 1.14
RPAIN-209ENST00000571558 UBTFP17480 764 aaKnown RBP22.14■■□□□ 1.13
RPAIN-209ENST00000571558 ZNF518AQ6AHZ1 1483 aa22.14■■□□□ 1.13
RPAIN-209ENST00000571558 CDK13Q14004 1512 aaKnown RBP22.14■■□□□ 1.13
RPAIN-209ENST00000571558 FMN1Q68DA7 1419 aa22.11■■□□□ 1.13
RPAIN-209ENST00000571558 UHRF1BP1Q6BDS2 1440 aa22.11■■□□□ 1.13
RPAIN-209ENST00000571558 CEBPAP49715 358 aaPredicted RBP22.1■■□□□ 1.13
RPAIN-209ENST00000571558 DISP3Q9P2K9 1392 aa22.09■■□□□ 1.13
RPAIN-209ENST00000571558 SETD1BQ9UPS6 1966 aaKnown RBP22.09■■□□□ 1.13
RPAIN-209ENST00000571558 MYO5CQ9NQX4 1742 aa22.08■■□□□ 1.13
RPAIN-209ENST00000571558 SOCS7O14512 581 aa22.07■■□□□ 1.12
RPAIN-209ENST00000571558 PTPRTO14522 1441 aa22.06■■□□□ 1.12
RPAIN-209ENST00000571558 KDM5CP41229 1560 aa22.06■■□□□ 1.12
RPAIN-209ENST00000571558 REREQ9P2R6 1566 aa22.06■■□□□ 1.12
RPAIN-209ENST00000571558 STRCQ7RTU9 1775 aa22.05■■□□□ 1.12
RPAIN-209ENST00000571558 AFAP1Q8N556 730 aa22.04■■□□□ 1.12
RPAIN-209ENST00000571558 TROQ12816 1431 aaPredicted RBP22.02■■□□□ 1.12
RPAIN-209ENST00000571558 ATP1B4Q9UN42 357 aaPredicted RBP22.02■■□□□ 1.12
RPAIN-209ENST00000571558 KIF14Q15058 1648 aa22.02■■□□□ 1.11
RPAIN-209ENST00000571558 CLIP1P30622 1438 aa22.02■■□□□ 1.11
RPAIN-209ENST00000571558 MLH3Q9UHC1 1453 aa22.01■■□□□ 1.11
RPAIN-209ENST00000571558 ILDR2Q71H61 639 aa22.01■■□□□ 1.11
RPAIN-209ENST00000571558 ESF1Q9H501 851 aaKnown RBP22.01■■□□□ 1.11
RPAIN-209ENST00000571558 ARHGAP5Q13017 1502 aa22.01■■□□□ 1.11
RPAIN-209ENST00000571558 AGLP35573 1532 aa21.99■■□□□ 1.11
RPAIN-209ENST00000571558 MYT1LQ9UL68 1186 aa21.99■■□□□ 1.11
RPAIN-209ENST00000571558 IQSEC2Q5JU85 1478 aa21.99■■□□□ 1.11
RPAIN-209ENST00000571558 CEP162Q5TB80 1403 aa21.98■■□□□ 1.11
RPAIN-209ENST00000571558 TRAPPC8Q9Y2L5 1435 aa21.98■■□□□ 1.11
RPAIN-209ENST00000571558 DIP2CQ9Y2E4 1556 aa21.98■■□□□ 1.11
RPAIN-209ENST00000571558 CNTLNQ9NXG0 1405 aa21.95■■□□□ 1.1
RPAIN-209ENST00000571558 ARHGAP35Q9NRY4 1499 aa21.93■■□□□ 1.1
RPAIN-209ENST00000571558 C3P01024 1663 aa21.92■■□□□ 1.1
RPAIN-209ENST00000571558 LTBP4Q8N2S1 1624 aa21.91■■□□□ 1.1
RPAIN-209ENST00000571558 ABCA6Q8N139 1617 aa21.9■■□□□ 1.1
RPAIN-209ENST00000571558 SPATA31D1Q6ZQQ2 1576 aa21.9■■□□□ 1.1
RPAIN-209ENST00000571558 NCOA1Q15788 1441 aa21.9■■□□□ 1.1
RPAIN-209ENST00000571558 NPATQ14207 1427 aa21.88■■□□□ 1.09
RPAIN-209ENST00000571558 ABCC1P33527 1531 aa21.87■■□□□ 1.09
RPAIN-209ENST00000571558 CDC42BPBQ9Y5S2 1711 aa21.86■■□□□ 1.09
RPAIN-209ENST00000571558 PREX2Q70Z35 1606 aa21.85■■□□□ 1.09
RPAIN-209ENST00000571558 CCDC18Q5T9S5 1454 aa21.83■■□□□ 1.08
RPAIN-209ENST00000571558 KIDINS220Q9ULH0 1771 aa21.81■■□□□ 1.08
RPAIN-209ENST00000571558 MROH2AA6NES4 1674 aa21.8■■□□□ 1.08
RPAIN-209ENST00000571558 ITSN2Q9NZM3 1697 aa21.8■■□□□ 1.08
RPAIN-209ENST00000571558 ZMYM3Q14202 1370 aa21.8■■□□□ 1.08
RPAIN-209ENST00000571558 CAMSAP1Q5T5Y3 1602 aa21.78■■□□□ 1.08
RPAIN-209ENST00000571558 CASKIN1Q8WXD9 1431 aa21.78■■□□□ 1.08
RPAIN-209ENST00000571558 PKD2Q13563 968 aa21.78■■□□□ 1.08
RPAIN-209ENST00000571558 LRRIQ1Q96JM4 1722 aa21.77■■□□□ 1.08
RPAIN-209ENST00000571558 PLA2R1Q13018 1463 aa21.75■■□□□ 1.07
RPAIN-209ENST00000571558 SPAG9O60271 1321 aaKnown RBP21.74■■□□□ 1.07
RPAIN-209ENST00000571558 SAMD9LQ8IVG5 1584 aa21.74■■□□□ 1.07
RPAIN-209ENST00000571558 PPP6R1Q9UPN7 881 aa21.72■■□□□ 1.07
RPAIN-209ENST00000571558 UBAP1LF5GYI3 381 aa21.72■■□□□ 1.07
RPAIN-209ENST00000571558 NCKAP5LQ9HCH0 1330 aa21.71■■□□□ 1.07
RPAIN-209ENST00000571558 CDC42BPAQ5VT25 1732 aa21.7■■□□□ 1.07
RPAIN-209ENST00000571558 KIAA1107Q9UPP5 1409 aa21.7■■□□□ 1.06
RPAIN-209ENST00000571558 ZNF335Q9H4Z2 1342 aaPredicted RBP21.7■■□□□ 1.06
RPAIN-209ENST00000571558 TCOF1Q13428 1488 aaKnown RBP21.69■■□□□ 1.06
RPAIN-209ENST00000571558 PLEKHH2Q8IVE3 1493 aa21.69■■□□□ 1.06
RPAIN-209ENST00000571558 ZNF777Q9ULD5 760 aaPredicted RBP21.68■■□□□ 1.06
RPAIN-209ENST00000571558 ZNF142P52746 1687 aaPredicted RBP21.67■■□□□ 1.06
RPAIN-209ENST00000571558 VPS8Q8N3P4 1428 aa21.67■■□□□ 1.06
RPAIN-209ENST00000571558 GPATCH8Q9UKJ3 1502 aaKnown RBP21.66■■□□□ 1.06
RPAIN-209ENST00000571558 PTPRKQ15262 1439 aa21.66■■□□□ 1.06
RPAIN-209ENST00000571558 ATP7AQ04656 1500 aa21.66■■□□□ 1.06
RPAIN-209ENST00000571558 SYCP2Q9BX26 1530 aa21.66■■□□□ 1.06
RPAIN-209ENST00000571558 FYCO1Q9BQS8 1478 aa21.66■■□□□ 1.06
RPAIN-209ENST00000571558 PLXNC1O60486 1568 aa21.65■■□□□ 1.06
RPAIN-209ENST00000571558 A2MP01023 1474 aa21.65■■□□□ 1.06
RPAIN-209ENST00000571558 HNRNPMP52272 730 aaKnown RBP eCLIP21.64■■□□□ 1.06
RPAIN-209ENST00000571558 CEP170BQ9Y4F5 1589 aaPredicted RBP21.64■■□□□ 1.06
RPAIN-209ENST00000571558 MYO3AQ8NEV4 1616 aa21.64■■□□□ 1.05
RPAIN-209ENST00000571558 SUPT6HQ7KZ85 1726 aaKnown RBP21.63■■□□□ 1.05
RPAIN-209ENST00000571558 CFDP1Q9UEE9 299 aaPredicted RBP21.62■■□□□ 1.05
RPAIN-209ENST00000571558 CLTCQ00610 1675 aaKnown RBP21.61■■□□□ 1.05
RPAIN-209ENST00000571558 GGT6Q6P531 493 aa21.61■■□□□ 1.05
RPAIN-209ENST00000571558 INO80Q9ULG1 1556 aaPredicted RBP21.61■■□□□ 1.05
RPAIN-209ENST00000571558 CCNB3Q8WWL7 1395 aa21.57■■□□□ 1.04
RPAIN-209ENST00000571558 A2ML1A8K2U0 1454 aa21.57■■□□□ 1.04
RPAIN-209ENST00000571558 TOM1O60784 492 aa21.56■■□□□ 1.04
RPAIN-209ENST00000571558 CPS1P31327 1500 aa21.54■■□□□ 1.04
RPAIN-209ENST00000571558 ADGBQ8N7X0 1667 aa21.54■■□□□ 1.04
RPAIN-209ENST00000571558 RTEL1-TNFRSF6BF6WH68 1400 aa21.53■■□□□ 1.04
RPAIN-209ENST00000571558 DNMT1P26358 1616 aaKnown RBP21.51■■□□□ 1.03
RPAIN-209ENST00000571558 FAM135AQ9P2D6 1515 aa21.49■■□□□ 1.03
RPAIN-209ENST00000571558 HSPA1LP34931 641 aa21.49■■□□□ 1.03
RPAIN-209ENST00000571558 MTUS2Q5JR59 1369 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms