RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 MAGI2Q86UL8 1455 aa17.95■□□□□ 0.46
CTDNEP1-202ENST00000570380 SPATA31D1Q6ZQQ2 1576 aa17.94■□□□□ 0.46
CTDNEP1-202ENST00000570380 PLEKHD1A6NEE1 506 aa17.93■□□□□ 0.46
CTDNEP1-202ENST00000570380 ARHGEF12Q9NZN5 1544 aa17.93■□□□□ 0.46
CTDNEP1-202ENST00000570380 SETD1BQ9UPS6 1966 aaKnown RBP17.91■□□□□ 0.46
CTDNEP1-202ENST00000570380 CEBPAP49715 358 aaPredicted RBP17.89■□□□□ 0.45
CTDNEP1-202ENST00000570380 DMRT2Q9Y5R5 561 aa17.89■□□□□ 0.45
CTDNEP1-202ENST00000570380 SCAPERQ9BY12 1400 aa17.87■□□□□ 0.45
CTDNEP1-202ENST00000570380 ATP10AO60312 1499 aa17.87■□□□□ 0.45
CTDNEP1-202ENST00000570380 C9orf84Q5VXU9 1444 aa17.85■□□□□ 0.45
CTDNEP1-202ENST00000570380 RANGAP1P46060 587 aaPredicted RBP17.84■□□□□ 0.45
CTDNEP1-202ENST00000570380 PLCH2O75038 1416 aa17.82■□□□□ 0.44
CTDNEP1-202ENST00000570380 UHRF1BP1Q6BDS2 1440 aa17.82■□□□□ 0.44
CTDNEP1-202ENST00000570380 PTPRTO14522 1441 aa17.81■□□□□ 0.44
CTDNEP1-202ENST00000570380 LTBP4Q8N2S1 1624 aa17.8■□□□□ 0.44
CTDNEP1-202ENST00000570380 CSRNP3Q8WYN3 585 aa17.8■□□□□ 0.44
CTDNEP1-202ENST00000570380 MYO5CQ9NQX4 1742 aa17.8■□□□□ 0.44
CTDNEP1-202ENST00000570380 C3P01024 1663 aa17.8■□□□□ 0.44
CTDNEP1-202ENST00000570380 CDK13Q14004 1512 aaKnown RBP17.79■□□□□ 0.44
CTDNEP1-202ENST00000570380 IQSEC2Q5JU85 1478 aa17.75■□□□□ 0.43
CTDNEP1-202ENST00000570380 EFCAB2Q5VUJ9 269 aa17.74■□□□□ 0.43
CTDNEP1-202ENST00000570380 KDM5CP41229 1560 aa17.73■□□□□ 0.43
CTDNEP1-202ENST00000570380 DIP2CQ9Y2E4 1556 aa17.72■□□□□ 0.43
CTDNEP1-202ENST00000570380 ZNF518AQ6AHZ1 1483 aa17.72■□□□□ 0.43
CTDNEP1-202ENST00000570380 AFAP1Q8N556 730 aa17.71■□□□□ 0.43
CTDNEP1-202ENST00000570380 REREQ9P2R6 1566 aa17.7■□□□□ 0.42
CTDNEP1-202ENST00000570380 KIF14Q15058 1648 aa17.7■□□□□ 0.42
CTDNEP1-202ENST00000570380 ABCA6Q8N139 1617 aa17.69■□□□□ 0.42
CTDNEP1-202ENST00000570380 NCOA1Q15788 1441 aa17.68■□□□□ 0.42
CTDNEP1-202ENST00000570380 TRAPPC8Q9Y2L5 1435 aa17.67■□□□□ 0.42
CTDNEP1-202ENST00000570380 ARHGAP5Q13017 1502 aa17.66■□□□□ 0.42
CTDNEP1-202ENST00000570380 MYT1LQ9UL68 1186 aa17.65■□□□□ 0.42
CTDNEP1-202ENST00000570380 CDC42BPBQ9Y5S2 1711 aa17.64■□□□□ 0.41
CTDNEP1-202ENST00000570380 AGLP35573 1532 aa17.64■□□□□ 0.41
CTDNEP1-202ENST00000570380 CAMSAP1Q5T5Y3 1602 aa17.63■□□□□ 0.41
CTDNEP1-202ENST00000570380 MLH3Q9UHC1 1453 aa17.63■□□□□ 0.41
CTDNEP1-202ENST00000570380 ESF1Q9H501 851 aaKnown RBP17.62■□□□□ 0.41
CTDNEP1-202ENST00000570380 ATP1B4Q9UN42 357 aaPredicted RBP17.61■□□□□ 0.41
CTDNEP1-202ENST00000570380 UBAP1LF5GYI3 381 aa17.6■□□□□ 0.41
CTDNEP1-202ENST00000570380 EEA1Q15075 1411 aa17.6■□□□□ 0.41
CTDNEP1-202ENST00000570380 LRRIQ1Q96JM4 1722 aa17.6■□□□□ 0.41
CTDNEP1-202ENST00000570380 KIDINS220Q9ULH0 1771 aa17.6■□□□□ 0.41
CTDNEP1-202ENST00000570380 ZNF335Q9H4Z2 1342 aaPredicted RBP17.59■□□□□ 0.41
CTDNEP1-202ENST00000570380 MROH2AA6NES4 1674 aa17.58■□□□□ 0.41
CTDNEP1-202ENST00000570380 ITSN2Q9NZM3 1697 aa17.58■□□□□ 0.41
CTDNEP1-202ENST00000570380 TROQ12816 1431 aaPredicted RBP17.58■□□□□ 0.41
CTDNEP1-202ENST00000570380 CDK11AQ9UQ88 783 aaPredicted RBP17.58■□□□□ 0.4
CTDNEP1-202ENST00000570380 SUPT6HQ7KZ85 1726 aaKnown RBP17.58■□□□□ 0.4
CTDNEP1-202ENST00000570380 CNTLNQ9NXG0 1405 aa17.57■□□□□ 0.4
CTDNEP1-202ENST00000570380 NCKAP5LQ9HCH0 1330 aa17.57■□□□□ 0.4
CTDNEP1-202ENST00000570380 ABCC1P33527 1531 aa17.56■□□□□ 0.4
CTDNEP1-202ENST00000570380 NPATQ14207 1427 aa17.55■□□□□ 0.4
CTDNEP1-202ENST00000570380 FMN1Q68DA7 1419 aa17.55■□□□□ 0.4
CTDNEP1-202ENST00000570380 PREX2Q70Z35 1606 aa17.55■□□□□ 0.4
CTDNEP1-202ENST00000570380 ZNF142P52746 1687 aaPredicted RBP17.53■□□□□ 0.4
CTDNEP1-202ENST00000570380 CLIP1P30622 1438 aa17.53■□□□□ 0.4
CTDNEP1-202ENST00000570380 ZMYM3Q14202 1370 aa17.52■□□□□ 0.39
CTDNEP1-202ENST00000570380 MYO3AQ8NEV4 1616 aa17.51■□□□□ 0.39
CTDNEP1-202ENST00000570380 MED1Q15648 1581 aaPredicted RBP17.51■□□□□ 0.39
CTDNEP1-202ENST00000570380 CLTCQ00610 1675 aaKnown RBP17.51■□□□□ 0.39
CTDNEP1-202ENST00000570380 ARHGAP35Q9NRY4 1499 aa17.5■□□□□ 0.39
CTDNEP1-202ENST00000570380 CDC42BPAQ5VT25 1732 aa17.5■□□□□ 0.39
CTDNEP1-202ENST00000570380 PKD2Q13563 968 aa17.49■□□□□ 0.39
CTDNEP1-202ENST00000570380 PLA2R1Q13018 1463 aa17.49■□□□□ 0.39
CTDNEP1-202ENST00000570380 TCOF1Q13428 1488 aaKnown RBP17.49■□□□□ 0.39
CTDNEP1-202ENST00000570380 CEP170BQ9Y4F5 1589 aaPredicted RBP17.48■□□□□ 0.39
CTDNEP1-202ENST00000570380 HSPA1LP34931 641 aa17.47■□□□□ 0.39
CTDNEP1-202ENST00000570380 SAMD9LQ8IVG5 1584 aa17.46■□□□□ 0.39
CTDNEP1-202ENST00000570380 PTPRKQ15262 1439 aa17.43■□□□□ 0.38
CTDNEP1-202ENST00000570380 UBTFP17480 764 aaKnown RBP17.42■□□□□ 0.38
CTDNEP1-202ENST00000570380 EHMT2Q96KQ7 1210 aa17.42■□□□□ 0.38
CTDNEP1-202ENST00000570380 PPP6R1Q9UPN7 881 aa17.42■□□□□ 0.38
CTDNEP1-202ENST00000570380 SCAF1Q9H7N4 1312 aaKnown RBP17.42■□□□□ 0.38
CTDNEP1-202ENST00000570380 PIP4K2BP78356 416 aa17.41■□□□□ 0.38
CTDNEP1-202ENST00000570380 POLR1AO95602 1720 aaPredicted RBP17.4■□□□□ 0.38
CTDNEP1-202ENST00000570380 PLXNC1O60486 1568 aa17.4■□□□□ 0.38
CTDNEP1-202ENST00000570380 SYCP2Q9BX26 1530 aa17.39■□□□□ 0.37
CTDNEP1-202ENST00000570380 DNMT1P26358 1616 aaKnown RBP17.39■□□□□ 0.37
CTDNEP1-202ENST00000570380 SPAG9O60271 1321 aaKnown RBP17.38■□□□□ 0.37
CTDNEP1-202ENST00000570380 ATP7AQ04656 1500 aa17.37■□□□□ 0.37
CTDNEP1-202ENST00000570380 TOM1O60784 492 aa17.37■□□□□ 0.37
CTDNEP1-202ENST00000570380 INO80Q9ULG1 1556 aaPredicted RBP17.36■□□□□ 0.37
CTDNEP1-202ENST00000570380 HNRNPMP52272 730 aaKnown RBP eCLIP17.36■□□□□ 0.37
CTDNEP1-202ENST00000570380 ZNF777Q9ULD5 760 aaPredicted RBP17.36■□□□□ 0.37
CTDNEP1-202ENST00000570380 CPS1P31327 1500 aa17.36■□□□□ 0.37
CTDNEP1-202ENST00000570380 A2ML1A8K2U0 1454 aa17.35■□□□□ 0.37
CTDNEP1-202ENST00000570380 A2MP01023 1474 aa17.35■□□□□ 0.37
CTDNEP1-202ENST00000570380 CCDC18Q5T9S5 1454 aa17.35■□□□□ 0.37
CTDNEP1-202ENST00000570380 NEURL4Q96JN8 1562 aa17.35■□□□□ 0.37
CTDNEP1-202ENST00000570380 GGT6Q6P531 493 aa17.34■□□□□ 0.37
CTDNEP1-202ENST00000570380 SHANK2Q9UPX8 1470 aa17.34■□□□□ 0.37
CTDNEP1-202ENST00000570380 ALKQ9UM73 1620 aa17.33■□□□□ 0.37
CTDNEP1-202ENST00000570380 CASKIN1Q8WXD9 1431 aa17.32■□□□□ 0.36
CTDNEP1-202ENST00000570380 PHF23Q9BUL5 403 aaPredicted RBP17.32■□□□□ 0.36
CTDNEP1-202ENST00000570380 ADGBQ8N7X0 1667 aa17.32■□□□□ 0.36
CTDNEP1-202ENST00000570380 GPATCH8Q9UKJ3 1502 aaKnown RBP17.31■□□□□ 0.36
CTDNEP1-202ENST00000570380 VWDEQ8N2E2 1590 aa17.29■□□□□ 0.36
CTDNEP1-202ENST00000570380 KIAA1107Q9UPP5 1409 aa17.29■□□□□ 0.36
CTDNEP1-202ENST00000570380 PLEKHH2Q8IVE3 1493 aa17.25■□□□□ 0.35
CTDNEP1-202ENST00000570380 STRCP1A6NGW2 1772 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms