RNA–Protein interactions for RNA: ENST00000570124.1

SIN3A-215, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 2

Gene SIN3A, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-215ENST00000570124 ARXQ96QS3 562 aa8.99□□□□□ -0.97
SIN3A-215ENST00000570124 CHD1O14646 1710 aa8.98□□□□□ -0.97
SIN3A-215ENST00000570124 MAP3K13O43283 966 aa8.98□□□□□ -0.97
SIN3A-215ENST00000570124 KIF12Q96FN5 646 aa8.98□□□□□ -0.97
SIN3A-215ENST00000570124 KDM2AQ9Y2K7 1162 aa8.98□□□□□ -0.97
SIN3A-215ENST00000570124 GTPBP6O43824 516 aaPredicted RBP8.97□□□□□ -0.97
SIN3A-215ENST00000570124 RAD54L2Q9Y4B4 1467 aa8.96□□□□□ -0.97
SIN3A-215ENST00000570124 PSEN1P49768 467 aa8.96□□□□□ -0.98
SIN3A-215ENST00000570124 IFNL1Q8IU54 200 aa8.96□□□□□ -0.98
SIN3A-215ENST00000570124 PHF12Q96QT6 1004 aa8.95□□□□□ -0.98
SIN3A-215ENST00000570124 RYDENQ9NUL5 291 aaKnown RBP8.93□□□□□ -0.98
SIN3A-215ENST00000570124 ZNF608Q9ULD9 1512 aaPredicted RBP8.92□□□□□ -0.98
SIN3A-215ENST00000570124 RUSC2Q8N2Y8 1516 aa8.91□□□□□ -0.98
SIN3A-215ENST00000570124 ABCA10Q8WWZ4 1543 aa8.91□□□□□ -0.98
SIN3A-215ENST00000570124 C19orf67A6NJJ6 358 aa8.91□□□□□ -0.98
SIN3A-215ENST00000570124 NBR1Q14596 966 aa8.91□□□□□ -0.98
SIN3A-215ENST00000570124 SOGA1O94964 1423 aa8.9□□□□□ -0.98
SIN3A-215ENST00000570124 CTTNBP2Q8WZ74 1663 aa8.9□□□□□ -0.98
SIN3A-215ENST00000570124 IFT140Q96RY7 1462 aa8.89□□□□□ -0.99
SIN3A-215ENST00000570124 CUL7Q14999 1698 aa8.89□□□□□ -0.99
SIN3A-215ENST00000570124 TIMELESSQ9UNS1 1208 aa8.89□□□□□ -0.99
SIN3A-215ENST00000570124 TULP1O00294 542 aaPredicted RBP8.87□□□□□ -0.99
SIN3A-215ENST00000570124 CABP2Q9NPB3 220 aa8.87□□□□□ -0.99
SIN3A-215ENST00000570124 ADAMTS12P58397 1594 aa8.86□□□□□ -0.99
SIN3A-215ENST00000570124 AQRO60306 1485 aaKnown RBP eCLIP8.85□□□□□ -0.99
SIN3A-215ENST00000570124 MS4A3Q96HJ5 214 aa8.85□□□□□ -0.99
SIN3A-215ENST00000570124 GTF3C3Q9Y5Q9 886 aa8.85□□□□□ -0.99
SIN3A-215ENST00000570124 EFCAB3Q8N7B9 438 aa8.84□□□□□ -0.99
SIN3A-215ENST00000570124 MFRPQ9BY79 579 aa8.84□□□□□ -0.99
SIN3A-215ENST00000570124 GAPVD1Q14C86 1478 aa8.83□□□□□ -1
SIN3A-215ENST00000570124 ERICH3Q5RHP9 1530 aa8.83□□□□□ -1
SIN3A-215ENST00000570124 TDRD9Q8NDG6 1382 aaKnown RBP8.82□□□□□ -1
SIN3A-215ENST00000570124 KIF21BO75037 1637 aa8.81□□□□□ -1
SIN3A-215ENST00000570124 HAX1O00165 279 aa8.81□□□□□ -1
SIN3A-215ENST00000570124 TMEM106CQ9BVX2 250 aa8.81□□□□□ -1
SIN3A-215ENST00000570124 TRPC6Q9Y210 931 aa8.81□□□□□ -1
SIN3A-215ENST00000570124 GRIN2BQ13224 1484 aa8.79□□□□□ -1
SIN3A-215ENST00000570124 SNAPC4Q5SXM2 1469 aa8.79□□□□□ -1
SIN3A-215ENST00000570124 SOX12O15370 315 aa8.79□□□□□ -1
SIN3A-215ENST00000570124 NLRP6P59044 892 aa8.79□□□□□ -1
SIN3A-215ENST00000570124 PHF8Q9UPP1 1060 aa8.79□□□□□ -1
SIN3A-215ENST00000570124 KIF27Q86VH2 1401 aa8.79□□□□□ -1
SIN3A-215ENST00000570124 GOLGA2Q08379 1002 aa8.78□□□□□ -1
SIN3A-215ENST00000570124 CEP170Q5SW79 1584 aa8.77□□□□□ -1.01
SIN3A-215ENST00000570124 HOMEZQ8IX15 550 aa8.76□□□□□ -1.01
SIN3A-215ENST00000570124 FBXO22Q8NEZ5 403 aa8.76□□□□□ -1.01
SIN3A-215ENST00000570124 MAGI1Q96QZ7 1491 aaPredicted RBP8.76□□□□□ -1.01
SIN3A-215ENST00000570124 TIE1P35590 1138 aa8.75□□□□□ -1.01
SIN3A-215ENST00000570124 GALR2O43603 387 aaPredicted RBP8.74□□□□□ -1.01
SIN3A-215ENST00000570124 EVX2Q03828 476 aa8.74□□□□□ -1.01
SIN3A-215ENST00000570124 FAM9AQ8IZU1 332 aaPredicted RBP8.74□□□□□ -1.01
SIN3A-215ENST00000570124 EEA1Q15075 1411 aa8.73□□□□□ -1.01
SIN3A-215ENST00000570124 TTLL13PA6NNM8 815 aa8.73□□□□□ -1.01
SIN3A-215ENST00000570124 PPP1R37O75864 691 aa8.73□□□□□ -1.01
SIN3A-215ENST00000570124 MKRN3Q13064 507 aaKnown RBP8.73□□□□□ -1.01
SIN3A-215ENST00000570124 TMEM132AQ24JP5 1023 aa8.73□□□□□ -1.01
SIN3A-215ENST00000570124 CADPS2Q86UW7 1296 aa8.73□□□□□ -1.01
SIN3A-215ENST00000570124 IGF1RP08069 1367 aa8.73□□□□□ -1.01
SIN3A-215ENST00000570124 SYNJ2O15056 1496 aa8.72□□□□□ -1.01
SIN3A-215ENST00000570124 GRIN2AQ12879 1464 aa8.72□□□□□ -1.01
SIN3A-215ENST00000570124 BMP2KQ9NSY1 1161 aaPredicted RBP8.72□□□□□ -1.01
SIN3A-215ENST00000570124 SHROOM2Q13796 1616 aa8.72□□□□□ -1.01
SIN3A-215ENST00000570124 PRXQ9BXM0 1461 aa8.71□□□□□ -1.01
SIN3A-215ENST00000570124 RAPGEF2Q9Y4G8 1499 aa8.7□□□□□ -1.02
SIN3A-215ENST00000570124 MS4A4AQ96JQ5 239 aa8.7□□□□□ -1.02
SIN3A-215ENST00000570124 FHAD1B1AJZ9 1412 aa8.7□□□□□ -1.02
SIN3A-215ENST00000570124 CLASP1Q7Z460 1538 aa8.7□□□□□ -1.02
SIN3A-215ENST00000570124 LRRIQ1Q96JM4 1722 aa8.69□□□□□ -1.02
SIN3A-215ENST00000570124 CLCN6P51797 869 aa8.69□□□□□ -1.02
SIN3A-215ENST00000570124 TRIM35Q9UPQ4 493 aa8.68□□□□□ -1.02
SIN3A-215ENST00000570124 IQGAP2Q13576 1575 aa8.68□□□□□ -1.02
SIN3A-215ENST00000570124 CARMIL1Q5VZK9 1371 aa8.67□□□□□ -1.02
SIN3A-215ENST00000570124 WDR70Q9NW82 654 aa8.67□□□□□ -1.02
SIN3A-215ENST00000570124 GOLGA3Q08378 1498 aa8.65□□□□□ -1.02
SIN3A-215ENST00000570124 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.65□□□□□ -1.029e-12■■□□□ 13.1
SIN3A-215ENST00000570124 ERCC6L2Q5T890 1561 aa8.65□□□□□ -1.03
SIN3A-215ENST00000570124 C14orf37Q86TY3 774 aa8.64□□□□□ -1.03
SIN3A-215ENST00000570124 SAMD9Q5K651 1589 aa8.64□□□□□ -1.03
SIN3A-215ENST00000570124 NUP160Q12769 1436 aa8.63□□□□□ -1.03
SIN3A-215ENST00000570124 P3H3Q8IVL6 736 aa8.63□□□□□ -1.03
SIN3A-215ENST00000570124 RIMBP3CA6NJZ7 1639 aa8.62□□□□□ -1.03
SIN3A-215ENST00000570124 RIMBP3BA6NNM3 1639 aa8.62□□□□□ -1.03
SIN3A-215ENST00000570124 RIMBP3Q9UFD9 1639 aa8.62□□□□□ -1.03
SIN3A-215ENST00000570124 ATN1P54259 1190 aaPredicted RBP8.62□□□□□ -1.03
SIN3A-215ENST00000570124 POTEHQ6S545 545 aa8.62□□□□□ -1.03
SIN3A-215ENST00000570124 KIAA0556O60303 1618 aa8.62□□□□□ -1.03
SIN3A-215ENST00000570124 LOC105371045A0A1W2PR82 267 aa8.6□□□□□ -1.03
SIN3A-215ENST00000570124 ATMINO43313 823 aaPredicted RBP8.6□□□□□ -1.03
SIN3A-215ENST00000570124 ILDR1Q86SU0 546 aaPredicted RBP8.6□□□□□ -1.03
SIN3A-215ENST00000570124 CHMP7Q8WUX9 453 aaPredicted RBP8.6□□□□□ -1.03
SIN3A-215ENST00000570124 GABBR2O75899 941 aa8.59□□□□□ -1.03
SIN3A-215ENST00000570124 ASTLQ6HA08 431 aaPredicted RBP8.59□□□□□ -1.03
SIN3A-215ENST00000570124 KCNV2Q8TDN2 545 aa8.59□□□□□ -1.03
SIN3A-215ENST00000570124 KIAA0586Q9BVV6 1533 aa8.59□□□□□ -1.03
SIN3A-215ENST00000570124 UGGT2Q9NYU1 1516 aa8.59□□□□□ -1.03
SIN3A-215ENST00000570124 NCKAP5LQ9HCH0 1330 aa8.57□□□□□ -1.04
SIN3A-215ENST00000570124 DISP1Q96F81 1524 aa8.56□□□□□ -1.04
SIN3A-215ENST00000570124 PDE4AP27815 886 aa8.56□□□□□ -1.04
SIN3A-215ENST00000570124 DPY19L2Q6NUT2 758 aa8.56□□□□□ -1.04
SIN3A-215ENST00000570124 LARP6Q9BRS8 491 aaKnown RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms