RNA–Protein interactions for RNA: ENST00000568670.5

FANCI-215, Transcript of FA complementation group I, human

TSL 3

Gene FANCI, Length 285 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FANCI-215	ENST00000568670	P3H3	Q8IVL6	736 aa		11.85	□□□□□ -0.51
FANCI-215	ENST00000568670	STRC	Q7RTU9	1775 aa		11.84	□□□□□ -0.51
FANCI-215	ENST00000568670	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	11.84	□□□□□ -0.51
FANCI-215	ENST00000568670	HNRNPUL2	Q1KMD3	747 aa	Known RBP	11.84	□□□□□ -0.51
FANCI-215	ENST00000568670	FANCA	O15360	1455 aa		11.83	□□□□□ -0.52
FANCI-215	ENST00000568670	RAPGEF6	Q8TEU7	1601 aa		11.83	□□□□□ -0.52
FANCI-215	ENST00000568670	MLEC	Q14165	292 aa		11.83	□□□□□ -0.52
FANCI-215	ENST00000568670	FAM9A	Q8IZU1	332 aa	Predicted RBP	11.83	□□□□□ -0.52
FANCI-215	ENST00000568670	NCBP3	Q53F19	620 aa	Known RBP	11.82	□□□□□ -0.52
FANCI-215	ENST00000568670	CFAP74	Q9C0B2	1584 aa		11.82	□□□□□ -0.52
FANCI-215	ENST00000568670	TTC37	Q6PGP7	1564 aa		11.81	□□□□□ -0.52
FANCI-215	ENST00000568670	POGZ	Q7Z3K3	1410 aa		11.81	□□□□□ -0.52
FANCI-215	ENST00000568670	DENND4B	O75064	1496 aa	Predicted RBP	11.81	□□□□□ -0.52
FANCI-215	ENST00000568670	ZFYVE16	Q7Z3T8	1539 aa		11.8	□□□□□ -0.52
FANCI-215	ENST00000568670	EFCAB5	A4FU69	1503 aa		11.79	□□□□□ -0.52
FANCI-215	ENST00000568670	AKNA	Q7Z591	1439 aa		11.78	□□□□□ -0.52
FANCI-215	ENST00000568670	SETD1B	Q9UPS6	1966 aa	Known RBP	11.78	□□□□□ -0.52
FANCI-215	ENST00000568670	YEATS2	Q9ULM3	1422 aa		11.77	□□□□□ -0.53
FANCI-215	ENST00000568670	ZMYM4	Q5VZL5	1548 aa		11.76	□□□□□ -0.53
FANCI-215	ENST00000568670	HECW1	Q76N89	1606 aa		11.76	□□□□□ -0.53
FANCI-215	ENST00000568670	CAPN15	O75808	1086 aa		11.76	□□□□□ -0.53
FANCI-215	ENST00000568670	DSG3	P32926	999 aa		11.75	□□□□□ -0.53
FANCI-215	ENST00000568670	FHOD3	Q2V2M9	1422 aa		11.75	□□□□□ -0.53
FANCI-215	ENST00000568670	SAMD9	Q5K651	1589 aa		11.75	□□□□□ -0.53
FANCI-215	ENST00000568670	CEBPA	P49715	358 aa	Predicted RBP	11.73	□□□□□ -0.53
FANCI-215	ENST00000568670	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	11.73	□□□□□ -0.53
FANCI-215	ENST00000568670	ARHGEF12	Q9NZN5	1544 aa		11.71	□□□□□ -0.53
FANCI-215	ENST00000568670	NUP153	P49790	1475 aa	Known RBP	11.71	□□□□□ -0.53
FANCI-215	ENST00000568670	C3	P01024	1663 aa		11.71	□□□□□ -0.54
FANCI-215	ENST00000568670	PRX	Q9BXM0	1461 aa		11.7	□□□□□ -0.54
FANCI-215	ENST00000568670	SPINK5	Q9NQ38	1064 aa	Predicted RBP	11.7	□□□□□ -0.54
FANCI-215	ENST00000568670	MAGI2	Q86UL8	1455 aa		11.7	□□□□□ -0.54
FANCI-215	ENST00000568670	UHRF1BP1	Q6BDS2	1440 aa		11.69	□□□□□ -0.54
FANCI-215	ENST00000568670	MYO5C	Q9NQX4	1742 aa		11.69	□□□□□ -0.54
FANCI-215	ENST00000568670	PLEKHD1	A6NEE1	506 aa		11.69	□□□□□ -0.54
FANCI-215	ENST00000568670	RANGAP1	P46060	587 aa	Predicted RBP	11.69	□□□□□ -0.54
FANCI-215	ENST00000568670		U3KPZ7	1027 aa	Predicted RBP	11.69	□□□□□ -0.54
FANCI-215	ENST00000568670	SUPT6H	Q7KZ85	1726 aa	Known RBP	11.67	□□□□□ -0.54
FANCI-215	ENST00000568670	ATP10A	O60312	1499 aa		11.67	□□□□□ -0.54
FANCI-215	ENST00000568670	SCAPER	Q9BY12	1400 aa		11.67	□□□□□ -0.54
FANCI-215	ENST00000568670	LTBP4	Q8N2S1	1624 aa		11.67	□□□□□ -0.54
FANCI-215	ENST00000568670	C9orf84	Q5VXU9	1444 aa		11.66	□□□□□ -0.54
FANCI-215	ENST00000568670	PTPRT	O14522	1441 aa		11.65	□□□□□ -0.54
FANCI-215	ENST00000568670	IQSEC2	Q5JU85	1478 aa		11.63	□□□□□ -0.55
FANCI-215	ENST00000568670	CDK13	Q14004	1512 aa	Known RBP	11.62	□□□□□ -0.55
FANCI-215	ENST00000568670	MYT1L	Q9UL68	1186 aa		11.62	□□□□□ -0.55
FANCI-215	ENST00000568670	NPM3	O75607	178 aa	Known RBP	11.6	□□□□□ -0.55
FANCI-215	ENST00000568670	DIP2C	Q9Y2E4	1556 aa		11.59	□□□□□ -0.55
FANCI-215	ENST00000568670	UBAP1L	F5GYI3	381 aa		11.59	□□□□□ -0.55
FANCI-215	ENST00000568670	ABCA6	Q8N139	1617 aa		11.59	□□□□□ -0.55
FANCI-215	ENST00000568670	PLCH2	O75038	1416 aa		11.59	□□□□□ -0.55
FANCI-215	ENST00000568670	CAMSAP1	Q5T5Y3	1602 aa		11.58	□□□□□ -0.56
FANCI-215	ENST00000568670	ESF1	Q9H501	851 aa	Known RBP	11.58	□□□□□ -0.56
FANCI-215	ENST00000568670	MED1	Q15648	1581 aa	Predicted RBP	11.57	□□□□□ -0.56
FANCI-215	ENST00000568670	CDC42BPB	Q9Y5S2	1711 aa		11.57	□□□□□ -0.56
FANCI-215	ENST00000568670	ZNF518A	Q6AHZ1	1483 aa		11.57	□□□□□ -0.56
FANCI-215	ENST00000568670	KIF14	Q15058	1648 aa		11.57	□□□□□ -0.56
FANCI-215	ENST00000568670	KDM5C	P41229	1560 aa		11.56	□□□□□ -0.56
FANCI-215	ENST00000568670	NCOA1	Q15788	1441 aa		11.56	□□□□□ -0.56
FANCI-215	ENST00000568670	EFCAB2	Q5VUJ9	269 aa		11.55	□□□□□ -0.56
FANCI-215	ENST00000568670	ATP1B4	Q9UN42	357 aa	Predicted RBP	11.55	□□□□□ -0.56
FANCI-215	ENST00000568670	ARHGAP5	Q13017	1502 aa		11.55	□□□□□ -0.56
FANCI-215	ENST00000568670	RERE	Q9P2R6	1566 aa		11.54	□□□□□ -0.56
FANCI-215	ENST00000568670	TRAPPC8	Q9Y2L5	1435 aa		11.54	□□□□□ -0.56
FANCI-215	ENST00000568670	AFAP1	Q8N556	730 aa		11.54	□□□□□ -0.56
FANCI-215	ENST00000568670	MROH2A	A6NES4	1674 aa		11.54	□□□□□ -0.56
FANCI-215	ENST00000568670	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	11.54	□□□□□ -0.56
FANCI-215	ENST00000568670	CSRNP3	Q8WYN3	585 aa		11.53	□□□□□ -0.56
FANCI-215	ENST00000568670	NCKAP5L	Q9HCH0	1330 aa		11.53	□□□□□ -0.56
FANCI-215	ENST00000568670	ITSN2	Q9NZM3	1697 aa		11.52	□□□□□ -0.56
FANCI-215	ENST00000568670	CLTC	Q00610	1675 aa	Known RBP	11.52	□□□□□ -0.57
FANCI-215	ENST00000568670	LRRIQ1	Q96JM4	1722 aa		11.52	□□□□□ -0.57
FANCI-215	ENST00000568670	KIDINS220	Q9ULH0	1771 aa		11.51	□□□□□ -0.57
FANCI-215	ENST00000568670	ZNF142	P52746	1687 aa	Predicted RBP	11.51	□□□□□ -0.57
FANCI-215	ENST00000568670	AGL	P35573	1532 aa		11.5	□□□□□ -0.57
FANCI-215	ENST00000568670	MYO3A	Q8NEV4	1616 aa		11.5	□□□□□ -0.57
FANCI-215	ENST00000568670	PIP4K2B	P78356	416 aa		11.49	□□□□□ -0.57
FANCI-215	ENST00000568670	PREX2	Q70Z35	1606 aa		11.48	□□□□□ -0.57
FANCI-215	ENST00000568670	POLR1A	O95602	1720 aa	Predicted RBP	11.48	□□□□□ -0.57
FANCI-215	ENST00000568670	MLH3	Q9UHC1	1453 aa		11.47	□□□□□ -0.57
FANCI-215	ENST00000568670	CNTLN	Q9NXG0	1405 aa		11.47	□□□□□ -0.57
FANCI-215	ENST00000568670	HSPA1L	P34931	641 aa		11.47	□□□□□ -0.57
FANCI-215	ENST00000568670	CDC42BPA	Q5VT25	1732 aa		11.46	□□□□□ -0.57
FANCI-215	ENST00000568670	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	11.45	□□□□□ -0.58
FANCI-215	ENST00000568670	ABCC1	P33527	1531 aa		11.45	□□□□□ -0.58
FANCI-215	ENST00000568670	CDK11A	Q9UQ88	783 aa	Predicted RBP	11.45	□□□□□ -0.58
FANCI-215	ENST00000568670	NPAT	Q14207	1427 aa		11.44	□□□□□ -0.58
FANCI-215	ENST00000568670	CLIP1	P30622	1438 aa		11.43	□□□□□ -0.58
FANCI-215	ENST00000568670	ABCB7	O75027	752 aa		11.43	□□□□□ -0.58
FANCI-215	ENST00000568670	PLA2R1	Q13018	1463 aa		11.43	□□□□□ -0.58
FANCI-215	ENST00000568670	TRO	Q12816	1431 aa	Predicted RBP	11.43	□□□□□ -0.58
FANCI-215	ENST00000568670	ZMYM3	Q14202	1370 aa		11.42	□□□□□ -0.58
FANCI-215	ENST00000568670	EHMT2	Q96KQ7	1210 aa		11.42	□□□□□ -0.58
FANCI-215	ENST00000568670	TCOF1	Q13428	1488 aa	Known RBP	11.41	□□□□□ -0.58
FANCI-215	ENST00000568670	TOM1	O60784	492 aa		11.41	□□□□□ -0.58
FANCI-215	ENST00000568670	PKD2	Q13563	968 aa		11.41	□□□□□ -0.58
FANCI-215	ENST00000568670	FMN1	Q68DA7	1419 aa		11.4	□□□□□ -0.58
FANCI-215	ENST00000568670	SAMD9L	Q8IVG5	1584 aa		11.4	□□□□□ -0.58
FANCI-215	ENST00000568670	DNMT1	P26358	1616 aa	Known RBP	11.39	□□□□□ -0.59
FANCI-215	ENST00000568670	APLP2	Q06481	763 aa		11.39	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms