RNA–Protein interactions for RNA: ENST00000567289.5

SIN3A-208, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 2 BASIC

Gene SIN3A, Length 4,078 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-208ENST00000567289 PRKCSHP14314 528 aaPredicted RBP15.17■□□□□ 0.02
SIN3A-208ENST00000567289 GSE1Q14687 1217 aa15.17■□□□□ 0.02
SIN3A-208ENST00000567289 FHOD3Q2V2M9 1422 aa15.16■□□□□ 0.02
SIN3A-208ENST00000567289 FTSJ3Q8IY81 847 aaKnown RBP15.15■□□□□ 0.02
SIN3A-208ENST00000567289 ARAP1Q96P48 1450 aa15.13■□□□□ 0.01
SIN3A-208ENST00000567289 CCDC146Q8IYE0 955 aa15.13■□□□□ 0.01
SIN3A-208ENST00000567289 CLUAP1Q96AJ1 413 aa15.13■□□□□ 0.01
SIN3A-208ENST00000567289 CRBNQ96SW2 442 aa15.13■□□□□ 0.01
SIN3A-208ENST00000567289 ST20-MTHFSA0A0A6YYL1 179 aa15.12■□□□□ 0.01
SIN3A-208ENST00000567289 SKAP1Q86WV1 359 aa15.12■□□□□ 0.01
SIN3A-208ENST00000567289 RRP1P56182 461 aaKnown RBP15.12■□□□□ 0.01
SIN3A-208ENST00000567289 PNNQ9H307 717 aaKnown RBP15.12■□□□□ 0.01
SIN3A-208ENST00000567289 PHLDB1Q86UU1 1377 aa15.11■□□□□ 0.01
SIN3A-208ENST00000567289 AKNAQ7Z591 1439 aa15.1■□□□□ 0.01
SIN3A-208ENST00000567289 PLEKHD1A6NEE1 506 aa15.09■□□□□ 0.01
SIN3A-208ENST00000567289 DNTTIP2Q5QJE6 756 aaKnown RBP15.08■□□□□ 0.01
SIN3A-208ENST00000567289 FMN1Q68DA7 1419 aa15.08■□□□□ 0
SIN3A-208ENST00000567289 CHMP7Q8WUX9 453 aaPredicted RBP15.07■□□□□ 0
SIN3A-208ENST00000567289 NFKBIBQ15653 356 aa15.07■□□□□ 0
SIN3A-208ENST00000567289 HSP90AB1P08238 724 aaKnown RBP15.07■□□□□ 0
SIN3A-208ENST00000567289 CDCA7LQ96GN5 454 aa15.07■□□□□ 0
SIN3A-208ENST00000567289 FOXD4L1Q9NU39 408 aa15.07■□□□□ 0
SIN3A-208ENST00000567289 GOLGA6L22H0YM25 854 aa15.07■□□□□ 0
SIN3A-208ENST00000567289 USP35Q9P2H5 1018 aa15.07■□□□□ 0
SIN3A-208ENST00000567289 KIF7Q2M1P5 1343 aa15.06■□□□□ 0
SIN3A-208ENST00000567289 PTMAP06454 111 aaKnown RBP15.06■□□□□ 0
SIN3A-208ENST00000567289 PLCB2Q00722 1185 aa15.06■□□□□ 0
SIN3A-208ENST00000567289 KTN1Q86UP2 1357 aaKnown RBP15.06■□□□□ 0
SIN3A-208ENST00000567289 VSIG10Q8N0Z9 540 aa15.06■□□□□ 0
SIN3A-208ENST00000567289 RRBP1Q9P2E9 1410 aaKnown RBP15.06■□□□□ 0
SIN3A-208ENST00000567289 BCL2L13Q9BXK5 485 aa15.05■□□□□ -0
SIN3A-208ENST00000567289 UNC13AQ9UPW8 1703 aa15.05■□□□□ -0
SIN3A-208ENST00000567289 NLRP13Q86W25 1043 aa15.05■□□□□ -0
SIN3A-208ENST00000567289 TMF1P82094 1093 aa15.04■□□□□ -0
SIN3A-208ENST00000567289 L1TD1Q5T7N2 865 aaKnown RBP15.04■□□□□ -0
SIN3A-208ENST00000567289 WDR97A6NE52 1622 aa15.04■□□□□ -0
SIN3A-208ENST00000567289 MFAP1P55081 439 aaKnown RBP15.04■□□□□ -0
SIN3A-208ENST00000567289 U2SURPO15042 1029 aaKnown RBP15.03■□□□□ -0
SIN3A-208ENST00000567289 PRXQ9BXM0 1461 aa15.03■□□□□ -0
SIN3A-208ENST00000567289 RALBP1Q15311 655 aa15.02■□□□□ -0
SIN3A-208ENST00000567289 TDRD9Q8NDG6 1382 aaKnown RBP15.01□□□□□ -0.01
SIN3A-208ENST00000567289 FRAT2O75474 233 aaPredicted RBP15.01□□□□□ -0.01
SIN3A-208ENST00000567289 CCDC18Q5T9S5 1454 aa15.01□□□□□ -0.01
SIN3A-208ENST00000567289 HSCBQ8IWL3 235 aa15.01□□□□□ -0.01
SIN3A-208ENST00000567289 MYH16Q9H6N6 1097 aa15.01□□□□□ -0.01
SIN3A-208ENST00000567289 CCDC7Q96M83 1385 aa15.01□□□□□ -0.01
SIN3A-208ENST00000567289 GOLGA6L3A6NEY3 463 aa15□□□□□ -0.01
SIN3A-208ENST00000567289 ROCK2O75116 1388 aaKnown RBP15□□□□□ -0.01
SIN3A-208ENST00000567289 NUP155O75694 1391 aa14.99□□□□□ -0.01
SIN3A-208ENST00000567289 GOLGA2Q08379 1002 aa14.99□□□□□ -0.01
SIN3A-208ENST00000567289 RRP7AQ9Y3A4 280 aaKnown RBP14.99□□□□□ -0.01
SIN3A-208ENST00000567289 FAM161AQ3B820 660 aa14.99□□□□□ -0.01
SIN3A-208ENST00000567289 TOP2BQ02880 1626 aa14.99□□□□□ -0.01
SIN3A-208ENST00000567289 APBB1O00213 710 aa14.99□□□□□ -0.01
SIN3A-208ENST00000567289 C11orf95C9JLR9 678 aaPredicted RBP14.98□□□□□ -0.01
SIN3A-208ENST00000567289 SAFB2Q14151 953 aaKnown RBP eCLIP14.98□□□□□ -0.01
SIN3A-208ENST00000567289 AMER1Q5JTC6 1135 aaPredicted RBP14.98□□□□□ -0.01
SIN3A-208ENST00000567289 BICRAQ9NZM4 1560 aa14.98□□□□□ -0.01
SIN3A-208ENST00000567289 PANK3Q9H999 370 aa14.97□□□□□ -0.01
SIN3A-208ENST00000567289 COG6Q9Y2V7 657 aa14.97□□□□□ -0.01
SIN3A-208ENST00000567289 ERICH3Q5RHP9 1530 aa14.97□□□□□ -0.01
SIN3A-208ENST00000567289 MYBBP1AQ9BQG0 1328 aaKnown RBP14.96□□□□□ -0.01
SIN3A-208ENST00000567289 PLEKHG5O94827 1062 aa14.96□□□□□ -0.01
SIN3A-208ENST00000567289 STAG3Q9UJ98 1225 aa14.96□□□□□ -0.01
SIN3A-208ENST00000567289 USP47Q96K76 1375 aa14.96□□□□□ -0.02
SIN3A-208ENST00000567289 NBPF8Q3BBV2 869 aa14.96□□□□□ -0.02
SIN3A-208ENST00000567289 HSP90AA2PQ14568 343 aaPredicted RBP14.95□□□□□ -0.02
SIN3A-208ENST00000567289 CFAP53Q96M91 514 aa14.95□□□□□ -0.02
SIN3A-208ENST00000567289 CDCA8Q53HL2 280 aa14.95□□□□□ -0.02
SIN3A-208ENST00000567289 PLPPR3Q6T4P5 718 aa14.95□□□□□ -0.02
SIN3A-208ENST00000567289 MSNP26038 577 aaKnown RBP14.94□□□□□ -0.02
SIN3A-208ENST00000567289 ZNF644Q9H582 1327 aaPredicted RBP14.94□□□□□ -0.02
SIN3A-208ENST00000567289 PDE3BQ13370 1112 aa14.93□□□□□ -0.02
SIN3A-208ENST00000567289 CNTLNQ9NXG0 1405 aa14.93□□□□□ -0.02
SIN3A-208ENST00000567289 CENPQQ7L2Z9 268 aaPredicted RBP14.92□□□□□ -0.02
SIN3A-208ENST00000567289 APAF1O14727 1248 aa14.92□□□□□ -0.02
SIN3A-208ENST00000567289 RSPH6AQ9H0K4 717 aa14.92□□□□□ -0.02
SIN3A-208ENST00000567289 MS4A1P11836 297 aa14.91□□□□□ -0.02
SIN3A-208ENST00000567289 BACH2Q9BYV9 841 aa14.91□□□□□ -0.02
SIN3A-208ENST00000567289 ITPRIPQ8IWB1 547 aa14.91□□□□□ -0.02
SIN3A-208ENST00000567289 MAPK8IP3Q9UPT6 1336 aa14.91□□□□□ -0.02
SIN3A-208ENST00000567289 MORC1Q86VD1 984 aa14.91□□□□□ -0.02
SIN3A-208ENST00000567289 IGF1RP08069 1367 aa14.9□□□□□ -0.02
SIN3A-208ENST00000567289 KIF15Q9NS87 1388 aa14.9□□□□□ -0.02
SIN3A-208ENST00000567289 CUX1P39880 1505 aa14.9□□□□□ -0.02
SIN3A-208ENST00000567289 PEG3Q9GZU2 1588 aa14.89□□□□□ -0.03
SIN3A-208ENST00000567289 U2AF1L5P0DN76 240 aaPredicted RBP14.89□□□□□ -0.03
SIN3A-208ENST00000567289 U2AF1Q01081 240 aaKnown RBP eCLIP14.89□□□□□ -0.03
SIN3A-208ENST00000567289 HNRNPMP52272 730 aaKnown RBP eCLIP14.89□□□□□ -0.03
SIN3A-208ENST00000567289 FOXD4L5Q5VV16 416 aaPredicted RBP14.88□□□□□ -0.03
SIN3A-208ENST00000567289 FOXD4L4Q8WXT5 416 aaPredicted RBP14.88□□□□□ -0.03
SIN3A-208ENST00000567289 MAPKBP1O60336 1514 aa14.87□□□□□ -0.03
SIN3A-208ENST00000567289 LRRC9Q6ZRR7 1453 aa14.86□□□□□ -0.03
SIN3A-208ENST00000567289 PNISRQ8TF01 805 aaKnown RBP14.86□□□□□ -0.03
SIN3A-208ENST00000567289 RWDD1Q9H446 243 aaPredicted RBP14.86□□□□□ -0.03
SIN3A-208ENST00000567289 CENPJQ9HC77 1338 aaPredicted RBP14.86□□□□□ -0.03
SIN3A-208ENST00000567289 UACAQ9BZF9 1416 aa14.85□□□□□ -0.03
SIN3A-208ENST00000567289 FGD6Q6ZV73 1430 aa14.84□□□□□ -0.03
SIN3A-208ENST00000567289 PANK1Q8TE04 598 aa14.84□□□□□ -0.03
SIN3A-208ENST00000567289 ADAMTS8Q9UP79 889 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms