RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 GPATCH8Q9UKJ3 1502 aaKnown RBP23.98■■□□□ 1.43
CMTM3-213ENST00000566756 ABCC10Q5T3U5 1492 aa23.98■■□□□ 1.43
CMTM3-213ENST00000566756 CDC42BPAQ5VT25 1732 aa23.95■■□□□ 1.42
CMTM3-213ENST00000566756 KDM5BQ9UGL1 1544 aa23.93■■□□□ 1.42
CMTM3-213ENST00000566756 DNMT1P26358 1616 aaKnown RBP23.92■■□□□ 1.42
CMTM3-213ENST00000566756 AKNAQ7Z591 1439 aa23.92■■□□□ 1.42
CMTM3-213ENST00000566756 SIN3AQ96ST3 1273 aa23.91■■□□□ 1.42
CMTM3-213ENST00000566756 ZCCHC11Q5TAX3 1644 aaKnown RBP23.91■■□□□ 1.42
CMTM3-213ENST00000566756 PPP1R15AO75807 674 aaPredicted RBP23.9■■□□□ 1.42
CMTM3-213ENST00000566756 CFDP1Q9UEE9 299 aaPredicted RBP23.89■■□□□ 1.42
CMTM3-213ENST00000566756 NAIPQ13075 1403 aa23.88■■□□□ 1.41
CMTM3-213ENST00000566756 GCC2Q8IWJ2 1684 aa23.88■■□□□ 1.41
CMTM3-213ENST00000566756 CAMSAP2Q08AD1 1489 aa23.87■■□□□ 1.41
CMTM3-213ENST00000566756 DAPK1P53355 1430 aa23.87■■□□□ 1.41
CMTM3-213ENST00000566756 ABCC5O15440 1437 aa23.84■■□□□ 1.41
CMTM3-213ENST00000566756 ROCK1Q13464 1354 aa23.83■■□□□ 1.41
CMTM3-213ENST00000566756 PREX2Q70Z35 1606 aa23.83■■□□□ 1.4
CMTM3-213ENST00000566756 ZNF644Q9H582 1327 aaPredicted RBP23.82■■□□□ 1.4
CMTM3-213ENST00000566756 CDC42BPBQ9Y5S2 1711 aa23.81■■□□□ 1.4
CMTM3-213ENST00000566756 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.8■■□□□ 1.43e-7■■■■■ 59
CMTM3-213ENST00000566756 CROCC2H7BZ55 1655 aa23.79■■□□□ 1.4
CMTM3-213ENST00000566756 TONSLQ96HA7 1378 aa23.78■■□□□ 1.4
CMTM3-213ENST00000566756 TTC37Q6PGP7 1564 aa23.77■■□□□ 1.4
CMTM3-213ENST00000566756 MYO5CQ9NQX4 1742 aa23.76■■□□□ 1.39
CMTM3-213ENST00000566756 ADGBQ8N7X0 1667 aa23.76■■□□□ 1.39
CMTM3-213ENST00000566756 SUPT16HQ9Y5B9 1047 aaKnown RBP23.76■■□□□ 1.39
CMTM3-213ENST00000566756 CHIC2Q9UKJ5 165 aa23.74■■□□□ 1.39
CMTM3-213ENST00000566756 ARHGEF5Q12774 1597 aa23.73■■□□□ 1.39
CMTM3-213ENST00000566756 CCER2I3L3R5 266 aa23.73■■□□□ 1.39
CMTM3-213ENST00000566756 ADGRL2O95490 1459 aa23.73■■□□□ 1.39
CMTM3-213ENST00000566756 DDX10Q13206 875 aaKnown RBP23.72■■□□□ 1.39
CMTM3-213ENST00000566756 MYT1Q01538 1121 aa23.72■■□□□ 1.39
CMTM3-213ENST00000566756 RRP7BPQ9NSQ0 103 aa23.72■■□□□ 1.39
CMTM3-213ENST00000566756 ZNF777Q9ULD5 760 aaPredicted RBP23.72■■□□□ 1.39
CMTM3-213ENST00000566756 SHANK2Q9UPX8 1470 aa23.71■■□□□ 1.39
CMTM3-213ENST00000566756 SAMD9LQ8IVG5 1584 aa23.71■■□□□ 1.39
CMTM3-213ENST00000566756 WDR7Q9Y4E6 1490 aa23.67■■□□□ 1.38
CMTM3-213ENST00000566756 NCOA1Q15788 1441 aa23.67■■□□□ 1.38
CMTM3-213ENST00000566756 MBD5Q9P267 1494 aa23.67■■□□□ 1.38
CMTM3-213ENST00000566756 RSPH4AQ5TD94 716 aa23.66■■□□□ 1.38
CMTM3-213ENST00000566756 PLCH2O75038 1416 aa23.66■■□□□ 1.38
CMTM3-213ENST00000566756 ARHGAP5Q13017 1502 aa23.66■■□□□ 1.38
CMTM3-213ENST00000566756 KDM6BO15054 1643 aa23.65■■□□□ 1.38
CMTM3-213ENST00000566756 ARAP3Q8WWN8 1544 aa23.65■■□□□ 1.38
CMTM3-213ENST00000566756 KCNH8Q96L42 1107 aa23.64■■□□□ 1.38
CMTM3-213ENST00000566756 PLEKHH2Q8IVE3 1493 aa23.64■■□□□ 1.37
CMTM3-213ENST00000566756 ANKRD30AQ9BXX3 1397 aa23.62■■□□□ 1.37
CMTM3-213ENST00000566756 KIAA1107Q9UPP5 1409 aa23.62■■□□□ 1.37
CMTM3-213ENST00000566756 CCDC141Q6ZP82 1450 aa23.61■■□□□ 1.37
CMTM3-213ENST00000566756 ANP32CO43423 234 aa23.61■■□□□ 1.37
CMTM3-213ENST00000566756 C9orf84Q5VXU9 1444 aa23.6■■□□□ 1.37
CMTM3-213ENST00000566756 ABCA9Q8IUA7 1624 aa23.6■■□□□ 1.37
CMTM3-213ENST00000566756 ASXL2Q76L83 1435 aa23.58■■□□□ 1.37
CMTM3-213ENST00000566756 TSPY4P0CV99 314 aa23.58■■□□□ 1.36
CMTM3-213ENST00000566756 TSPY10P0CW01 314 aa23.58■■□□□ 1.36
CMTM3-213ENST00000566756 MAST1Q9Y2H9 1570 aa23.57■■□□□ 1.36
CMTM3-213ENST00000566756 HNRNPMP52272 730 aaKnown RBP eCLIP23.57■■□□□ 1.36
CMTM3-213ENST00000566756 DENND4BO75064 1496 aaPredicted RBP23.57■■□□□ 1.36
CMTM3-213ENST00000566756 SYCP2Q9BX26 1530 aa23.57■■□□□ 1.36
CMTM3-213ENST00000566756 NPM1P06748 294 aaKnown RBP eCLIP23.56■■□□□ 1.36
CMTM3-213ENST00000566756 EFCAB2Q5VUJ9 269 aa23.55■■□□□ 1.36
CMTM3-213ENST00000566756 ABCC1P33527 1531 aa23.51■■□□□ 1.35
CMTM3-213ENST00000566756 TRIM52Q96A61 297 aa23.51■■□□□ 1.35
CMTM3-213ENST00000566756 ANKRD50Q9ULJ7 1429 aa23.5■■□□□ 1.35
CMTM3-213ENST00000566756 ARHGEF12Q9NZN5 1544 aa23.48■■□□□ 1.35
CMTM3-213ENST00000566756 RIMBP3CA6NJZ7 1639 aa23.48■■□□□ 1.35
CMTM3-213ENST00000566756 RIMBP3BA6NNM3 1639 aa23.48■■□□□ 1.35
CMTM3-213ENST00000566756 RIMBP3Q9UFD9 1639 aa23.48■■□□□ 1.35
CMTM3-213ENST00000566756 MPHOSPH9Q99550 1183 aa23.47■■□□□ 1.35
CMTM3-213ENST00000566756 HIRIP3Q9BW71 556 aaPredicted RBP23.47■■□□□ 1.35
CMTM3-213ENST00000566756 PLXNC1O60486 1568 aa23.46■■□□□ 1.35
CMTM3-213ENST00000566756 KIF15Q9NS87 1388 aa23.45■■□□□ 1.34
CMTM3-213ENST00000566756 FANCAO15360 1455 aa23.42■■□□□ 1.34
CMTM3-213ENST00000566756 PZPP20742 1482 aa23.4■■□□□ 1.34
CMTM3-213ENST00000566756 KDM5DQ9BY66 1539 aa23.4■■□□□ 1.34
CMTM3-213ENST00000566756 RPRD2Q5VT52 1461 aaKnown RBP23.39■■□□□ 1.34
CMTM3-213ENST00000566756 TRAPPC8Q9Y2L5 1435 aa23.37■■□□□ 1.33
CMTM3-213ENST00000566756 ANKRD30BQ9BXX2 1392 aa23.37■■□□□ 1.33
CMTM3-213ENST00000566756 RTEL1-TNFRSF6BF6WH68 1400 aa23.36■■□□□ 1.33
CMTM3-213ENST00000566756 EIF4G2P78344 907 aaKnown RBP eCLIP23.36■■□□□ 1.33
CMTM3-213ENST00000566756 SLC4A1APQ9BWU0 796 aaKnown RBP23.36■■□□□ 1.33
CMTM3-213ENST00000566756 CFAP74Q9C0B2 1584 aa23.36■■□□□ 1.33
CMTM3-213ENST00000566756 HSPA5P11021 654 aaKnown RBP23.35■■□□□ 1.33
CMTM3-213ENST00000566756 DUOX2Q9NRD8 1548 aa23.35■■□□□ 1.33
CMTM3-213ENST00000566756 WASHC2AQ641Q2 1341 aa23.33■■□□□ 1.33
CMTM3-213ENST00000566756 CYB5RLQ6IPT4 315 aa23.33■■□□□ 1.33
CMTM3-213ENST00000566756 TEX14Q8IWB6 1497 aa23.33■■□□□ 1.32
CMTM3-213ENST00000566756 NEFLP07196 543 aa23.32■■□□□ 1.32
CMTM3-213ENST00000566756 TSHZ2Q9NRE2 1034 aa23.32■■□□□ 1.32
CMTM3-213ENST00000566756 ADGRL1O94910 1474 aa23.32■■□□□ 1.32
CMTM3-213ENST00000566756 CD109Q6YHK3 1445 aa23.32■■□□□ 1.32
CMTM3-213ENST00000566756 UNC13BO14795 1591 aa23.31■■□□□ 1.32
CMTM3-213ENST00000566756 CNTLNQ9NXG0 1405 aa23.31■■□□□ 1.32
CMTM3-213ENST00000566756 FKBP8Q14318 412 aa23.31■■□□□ 1.32
CMTM3-213ENST00000566756 ERBINQ96RT1 1412 aa23.3■■□□□ 1.32
CMTM3-213ENST00000566756 L3MBTL2Q969R5 705 aa23.3■■□□□ 1.32
CMTM3-213ENST00000566756 ZFYVE16Q7Z3T8 1539 aa23.3■■□□□ 1.32
CMTM3-213ENST00000566756 NUP155O75694 1391 aa23.29■■□□□ 1.32
CMTM3-213ENST00000566756 INO80Q9ULG1 1556 aaPredicted RBP23.28■■□□□ 1.32
CMTM3-213ENST00000566756 POLR1AO95602 1720 aaPredicted RBP23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms