RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 TRIM52Q96A61 297 aa30.01■■■□□ 2.39
SPSB3-208ENST00000566339 HIRIP3Q9BW71 556 aaPredicted RBP29.99■■■□□ 2.39
SPSB3-208ENST00000566339 RBM19Q9Y4C8 960 aaKnown RBP29.99■■■□□ 2.39
SPSB3-208ENST00000566339 KIAA0556O60303 1618 aa29.98■■■□□ 2.39
SPSB3-208ENST00000566339 CDK13Q14004 1512 aaKnown RBP29.96■■■□□ 2.39
SPSB3-208ENST00000566339 KIAA0586Q9BVV6 1533 aa29.96■■■□□ 2.39
SPSB3-208ENST00000566339 CNTLNQ9NXG0 1405 aa29.95■■■□□ 2.38
SPSB3-208ENST00000566339 DENND4BO75064 1496 aaPredicted RBP29.95■■■□□ 2.38
SPSB3-208ENST00000566339 EIF4G2P78344 907 aaKnown RBP eCLIP29.93■■■□□ 2.38
SPSB3-208ENST00000566339 ROCK1Q13464 1354 aa29.93■■■□□ 2.38
SPSB3-208ENST00000566339 ERCC6L2Q5T890 1561 aa29.92■■■□□ 2.38
SPSB3-208ENST00000566339 DISP1Q96F81 1524 aa29.91■■■□□ 2.38
SPSB3-208ENST00000566339 WASHC2AQ641Q2 1341 aa29.89■■■□□ 2.38
SPSB3-208ENST00000566339 HSPA5P11021 654 aaKnown RBP29.89■■■□□ 2.38
SPSB3-208ENST00000566339 NCOA1Q15788 1441 aa29.87■■■□□ 2.37
SPSB3-208ENST00000566339 SHROOM2Q13796 1616 aa29.86■■■□□ 2.37
SPSB3-208ENST00000566339 RAPGEF6Q8TEU7 1601 aa29.85■■■□□ 2.37
SPSB3-208ENST00000566339 JPH4Q96JJ6 628 aa29.85■■■□□ 2.37
SPSB3-208ENST00000566339 FANCIQ9NVI1 1328 aa29.84■■■□□ 2.37
SPSB3-208ENST00000566339 HNRNPUQ00839 825 aaKnown RBP eCLIP29.84■■■□□ 2.37
SPSB3-208ENST00000566339 POLR1AO95602 1720 aaPredicted RBP29.83■■■□□ 2.37
SPSB3-208ENST00000566339 KDM6BO15054 1643 aa29.83■■■□□ 2.37
SPSB3-208ENST00000566339 DNMT1P26358 1616 aaKnown RBP29.81■■■□□ 2.36
SPSB3-208ENST00000566339 RPRD2Q5VT52 1461 aaKnown RBP29.81■■■□□ 2.36
SPSB3-208ENST00000566339 MPHOSPH9Q99550 1183 aa29.8■■■□□ 2.36
SPSB3-208ENST00000566339 NUP153P49790 1475 aaKnown RBP29.8■■■□□ 2.36
SPSB3-208ENST00000566339 PRG4Q92954 1404 aaPredicted RBP29.79■■■□□ 2.36
SPSB3-208ENST00000566339 CCDC7Q96M83 1385 aa29.78■■■□□ 2.36
SPSB3-208ENST00000566339 CDK11AQ9UQ88 783 aaPredicted RBP29.77■■■□□ 2.36
SPSB3-208ENST00000566339 RRP7BPQ9NSQ0 103 aa29.76■■■□□ 2.35
SPSB3-208ENST00000566339 ANKRD30BQ9BXX2 1392 aa29.75■■■□□ 2.35
SPSB3-208ENST00000566339 PPP4R2Q9NY27 417 aa29.72■■■□□ 2.35
SPSB3-208ENST00000566339 TEX14Q8IWB6 1497 aa29.72■■■□□ 2.35
SPSB3-208ENST00000566339 ADCY10Q96PN6 1610 aa29.72■■■□□ 2.35
SPSB3-208ENST00000566339 DAPK1P53355 1430 aa29.72■■■□□ 2.35
SPSB3-208ENST00000566339 TRHP20396 242 aaPredicted RBP29.72■■■□□ 2.35
SPSB3-208ENST00000566339 ZBED9Q6R2W3 1325 aa29.7■■■□□ 2.35
SPSB3-208ENST00000566339 L3MBTL2Q969R5 705 aa29.69■■■□□ 2.34
SPSB3-208ENST00000566339 PRKRIP1Q9H875 184 aaPredicted RBP29.69■■■□□ 2.34
SPSB3-208ENST00000566339 SPATA31E1Q6ZUB1 1445 aa29.69■■■□□ 2.34
SPSB3-208ENST00000566339 ITSN2Q9NZM3 1697 aa29.67■■■□□ 2.34
SPSB3-208ENST00000566339 ABCC5O15440 1437 aa29.64■■■□□ 2.34
SPSB3-208ENST00000566339 CHIC2Q9UKJ5 165 aa29.63■■■□□ 2.33
SPSB3-208ENST00000566339 ADGBQ8N7X0 1667 aa29.62■■■□□ 2.33
SPSB3-208ENST00000566339 TROQ12816 1431 aaPredicted RBP29.6■■■□□ 2.33
SPSB3-208ENST00000566339 CROCC2H7BZ55 1655 aa29.59■■■□□ 2.33
SPSB3-208ENST00000566339 ARID4BQ4LE39 1312 aaPredicted RBP29.59■■■□□ 2.33
SPSB3-208ENST00000566339 MYT1LQ9UL68 1186 aa29.56■■■□□ 2.32
SPSB3-208ENST00000566339 MBD5Q9P267 1494 aa29.53■■■□□ 2.32
SPSB3-208ENST00000566339 ADGRL2O95490 1459 aa29.52■■■□□ 2.32
SPSB3-208ENST00000566339 MRS2Q9HD23 443 aa29.52■■■□□ 2.32
SPSB3-208ENST00000566339 CAMSAP2Q08AD1 1489 aa29.51■■■□□ 2.31
SPSB3-208ENST00000566339 KIF7Q2M1P5 1343 aa29.5■■■□□ 2.31
SPSB3-208ENST00000566339 C11orf95C9JLR9 678 aaPredicted RBP29.49■■■□□ 2.31
SPSB3-208ENST00000566339 KIF14Q15058 1648 aa29.49■■■□□ 2.31
SPSB3-208ENST00000566339 NBPF8Q3BBV2 869 aa29.49■■■□□ 2.31
SPSB3-208ENST00000566339 SMG6Q86US8 1419 aaKnown RBP29.47■■■□□ 2.31
SPSB3-208ENST00000566339 MSH5O43196 834 aa29.47■■■□□ 2.31
SPSB3-208ENST00000566339 PZPP20742 1482 aa29.47■■■□□ 2.31
SPSB3-208ENST00000566339 GPATCH8Q9UKJ3 1502 aaKnown RBP29.46■■■□□ 2.31
SPSB3-208ENST00000566339 ABCA8O94911 1581 aa29.46■■■□□ 2.31
SPSB3-208ENST00000566339 PLB1Q6P1J6 1458 aa29.46■■■□□ 2.31
SPSB3-208ENST00000566339 CARMIL2Q6F5E8 1435 aa29.44■■■□□ 2.3
SPSB3-208ENST00000566339 SLC4A1APQ9BWU0 796 aaKnown RBP29.44■■■□□ 2.3
SPSB3-208ENST00000566339 ROCK2O75116 1388 aaKnown RBP29.43■■■□□ 2.3
SPSB3-208ENST00000566339 CCDC184Q52MB2 194 aa29.43■■■□□ 2.3
SPSB3-208ENST00000566339 KIAA1107Q9UPP5 1409 aa29.43■■■□□ 2.3
SPSB3-208ENST00000566339 ARID3CA6NKF2 412 aa29.41■■■□□ 2.3
SPSB3-208ENST00000566339 PTPRGP23470 1445 aa29.4■■■□□ 2.3
SPSB3-208ENST00000566339 UHRF1BP1Q6BDS2 1440 aa29.39■■■□□ 2.3
SPSB3-208ENST00000566339 CDC42BPAQ5VT25 1732 aa29.39■■■□□ 2.29
SPSB3-208ENST00000566339 ERICH6Q7L0X2 663 aa29.39■■■□□ 2.29
SPSB3-208ENST00000566339 ZNF644Q9H582 1327 aaPredicted RBP29.38■■■□□ 2.29
SPSB3-208ENST00000566339 DHX29Q7Z478 1369 aaKnown RBP29.38■■■□□ 2.29
SPSB3-208ENST00000566339 RNF123Q5XPI4 1314 aa29.38■■■□□ 2.29
SPSB3-208ENST00000566339 FAM9BQ8IZU0 186 aa29.37■■■□□ 2.29
SPSB3-208ENST00000566339 NPM1P06748 294 aaKnown RBP eCLIP29.36■■■□□ 2.29
SPSB3-208ENST00000566339 SHANK2Q9UPX8 1470 aa29.35■■■□□ 2.29
SPSB3-208ENST00000566339 IRX6P78412 446 aaPredicted RBP29.35■■■□□ 2.29
SPSB3-208ENST00000566339 ABCC10Q5T3U5 1492 aa29.34■■■□□ 2.29
SPSB3-208ENST00000566339 ARHGEF12Q9NZN5 1544 aa29.34■■■□□ 2.29
SPSB3-208ENST00000566339 KTN1Q86UP2 1357 aaKnown RBP29.34■■■□□ 2.29
SPSB3-208ENST00000566339 KDM5CP41229 1560 aa29.34■■■□□ 2.29
SPSB3-208ENST00000566339 FOXD1Q16676 465 aa29.34■■■□□ 2.29
SPSB3-208ENST00000566339 BCL11AQ9H165 835 aa29.34■■■□□ 2.29
SPSB3-208ENST00000566339 RALGAPBQ86X10 1494 aa29.31■■■□□ 2.28
SPSB3-208ENST00000566339 USP47Q96K76 1375 aa29.29■■■□□ 2.28
SPSB3-208ENST00000566339 ANKRD30AQ9BXX3 1397 aa29.29■■■□□ 2.28
SPSB3-208ENST00000566339 NUDCQ9Y266 331 aa29.29■■■□□ 2.28
SPSB3-208ENST00000566339 KDM5DQ9BY66 1539 aa29.29■■■□□ 2.28
SPSB3-208ENST00000566339 CFDP1Q9UEE9 299 aaPredicted RBP29.26■■■□□ 2.28
SPSB3-208ENST00000566339 BCORL1Q5H9F3 1711 aa29.25■■■□□ 2.27
SPSB3-208ENST00000566339 ATP10BO94823 1461 aa29.23■■■□□ 2.27
SPSB3-208ENST00000566339 ARHGEF5Q12774 1597 aa29.22■■■□□ 2.27
SPSB3-208ENST00000566339 B4GALNT3Q6L9W6 998 aa29.18■■■□□ 2.26
SPSB3-208ENST00000566339 ANKRD50Q9ULJ7 1429 aa29.18■■■□□ 2.26
SPSB3-208ENST00000566339 KIF15Q9NS87 1388 aa29.17■■■□□ 2.26
SPSB3-208ENST00000566339 KIF13AQ9H1H9 1805 aa29.17■■■□□ 2.26
SPSB3-208ENST00000566339 FAM69CQ0P6D2 419 aa29.15■■■□□ 2.26
SPSB3-208ENST00000566339 BRD4O60885 1362 aaPredicted RBP29.14■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms