RNA–Protein interactions for RNA: ENST00000566087.5

NSMCE1-211, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 5

Gene NSMCE1, Length 878 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-211ENST00000566087 POGZQ7Z3K3 1410 aa17.24■□□□□ 0.35
NSMCE1-211ENST00000566087 CDK13Q14004 1512 aaKnown RBP17.24■□□□□ 0.35
NSMCE1-211ENST00000566087 HECW1Q76N89 1606 aa17.24■□□□□ 0.35
NSMCE1-211ENST00000566087 FER1L4A9Z1Z3 1794 aa17.23■□□□□ 0.35
NSMCE1-211ENST00000566087 SCAPERQ9BY12 1400 aa17.2■□□□□ 0.34
NSMCE1-211ENST00000566087 FMN1Q68DA7 1419 aa17.19■□□□□ 0.34
NSMCE1-211ENST00000566087 MAGI2Q86UL8 1455 aa17.18■□□□□ 0.34
NSMCE1-211ENST00000566087 PLCH2O75038 1416 aa17.17■□□□□ 0.34
NSMCE1-211ENST00000566087 CERKQ8TCT0 537 aa17.17■□□□□ 0.34
NSMCE1-211ENST00000566087 ATP1B4Q9UN42 357 aaPredicted RBP17.17■□□□□ 0.34
NSMCE1-211ENST00000566087 CDK11AQ9UQ88 783 aaPredicted RBP17.15■□□□□ 0.34
NSMCE1-211ENST00000566087 CEBPAP49715 358 aaPredicted RBP17.14■□□□□ 0.33
NSMCE1-211ENST00000566087 MYO5CQ9NQX4 1742 aa17.13■□□□□ 0.33
NSMCE1-211ENST00000566087 ATP10AO60312 1499 aa17.13■□□□□ 0.33
NSMCE1-211ENST00000566087 ARHGEF12Q9NZN5 1544 aa17.13■□□□□ 0.33
NSMCE1-211ENST00000566087 KIF14Q15058 1648 aa17.12■□□□□ 0.33
NSMCE1-211ENST00000566087 C9orf84Q5VXU9 1444 aa17.12■□□□□ 0.33
NSMCE1-211ENST00000566087 ARHGAP35Q9NRY4 1499 aa17.12■□□□□ 0.33
NSMCE1-211ENST00000566087 PREX1Q8TCU6 1659 aa17.11■□□□□ 0.33
NSMCE1-211ENST00000566087 EFCAB2Q5VUJ9 269 aa17.1■□□□□ 0.33
NSMCE1-211ENST00000566087 CLIP1P30622 1438 aa17.07■□□□□ 0.32
NSMCE1-211ENST00000566087 AFAP1Q8N556 730 aa17.07■□□□□ 0.32
NSMCE1-211ENST00000566087 STRCQ7RTU9 1775 aa17.07■□□□□ 0.32
NSMCE1-211ENST00000566087 ARHGAP5Q13017 1502 aa17.06■□□□□ 0.32
NSMCE1-211ENST00000566087 MYT1LQ9UL68 1186 aa17.06■□□□□ 0.32
NSMCE1-211ENST00000566087 ZNF518AQ6AHZ1 1483 aa17.05■□□□□ 0.32
NSMCE1-211ENST00000566087 LRRIQ1Q96JM4 1722 aa17.04■□□□□ 0.32
NSMCE1-211ENST00000566087 KDM5CP41229 1560 aa17.03■□□□□ 0.32
NSMCE1-211ENST00000566087 DIP2CQ9Y2E4 1556 aa17.02■□□□□ 0.32
NSMCE1-211ENST00000566087 TROQ12816 1431 aaPredicted RBP17.02■□□□□ 0.31
NSMCE1-211ENST00000566087 ABCA6Q8N139 1617 aa17.01■□□□□ 0.31
NSMCE1-211ENST00000566087 UHRF1BP1Q6BDS2 1440 aa17.01■□□□□ 0.31
NSMCE1-211ENST00000566087 CDC42BPBQ9Y5S2 1711 aa17.01■□□□□ 0.31
NSMCE1-211ENST00000566087 C3P01024 1663 aa17■□□□□ 0.31
NSMCE1-211ENST00000566087 DISP3Q9P2K9 1392 aa16.99■□□□□ 0.31
NSMCE1-211ENST00000566087 CASKIN1Q8WXD9 1431 aa16.98■□□□□ 0.31
NSMCE1-211ENST00000566087 ILDR2Q71H61 639 aa16.98■□□□□ 0.31
NSMCE1-211ENST00000566087 DMRT2Q9Y5R5 561 aa16.98■□□□□ 0.31
NSMCE1-211ENST00000566087 TRAPPC8Q9Y2L5 1435 aa16.96■□□□□ 0.31
NSMCE1-211ENST00000566087 LOC105371045A0A1W2PR82 267 aa16.96■□□□□ 0.31
NSMCE1-211ENST00000566087 CCDC18Q5T9S5 1454 aa16.96■□□□□ 0.31
NSMCE1-211ENST00000566087 SETD1BQ9UPS6 1966 aaKnown RBP16.95■□□□□ 0.3
NSMCE1-211ENST00000566087 REREQ9P2R6 1566 aa16.95■□□□□ 0.3
NSMCE1-211ENST00000566087 ITSN2Q9NZM3 1697 aa16.94■□□□□ 0.3
NSMCE1-211ENST00000566087 MLH3Q9UHC1 1453 aa16.94■□□□□ 0.3
NSMCE1-211ENST00000566087 PREX2Q70Z35 1606 aa16.94■□□□□ 0.3
NSMCE1-211ENST00000566087 ABCC1P33527 1531 aa16.94■□□□□ 0.3
NSMCE1-211ENST00000566087 CEP162Q5TB80 1403 aa16.94■□□□□ 0.3
NSMCE1-211ENST00000566087 FOXD1Q16676 465 aa16.93■□□□□ 0.3
NSMCE1-211ENST00000566087 ESF1Q9H501 851 aaKnown RBP16.93■□□□□ 0.3
NSMCE1-211ENST00000566087 FYCO1Q9BQS8 1478 aa16.93■□□□□ 0.3
NSMCE1-211ENST00000566087 KIDINS220Q9ULH0 1771 aa16.91■□□□□ 0.3
NSMCE1-211ENST00000566087 AGLP35573 1532 aa16.91■□□□□ 0.3
NSMCE1-211ENST00000566087 PTPRTO14522 1441 aa16.9■□□□□ 0.3
NSMCE1-211ENST00000566087 CDC42BPAQ5VT25 1732 aa16.9■□□□□ 0.3
NSMCE1-211ENST00000566087 LTBP4Q8N2S1 1624 aa16.88■□□□□ 0.29
NSMCE1-211ENST00000566087 SPATA31D1Q6ZQQ2 1576 aa16.87■□□□□ 0.29
NSMCE1-211ENST00000566087 ZNF777Q9ULD5 760 aaPredicted RBP16.87■□□□□ 0.29
NSMCE1-211ENST00000566087 SOCS7O14512 581 aa16.86■□□□□ 0.29
NSMCE1-211ENST00000566087 NCOA1Q15788 1441 aa16.86■□□□□ 0.29
NSMCE1-211ENST00000566087 SAMD9LQ8IVG5 1584 aa16.85■□□□□ 0.29
NSMCE1-211ENST00000566087 CAMSAP1Q5T5Y3 1602 aa16.85■□□□□ 0.29
NSMCE1-211ENST00000566087 SUPT6HQ7KZ85 1726 aaKnown RBP16.84■□□□□ 0.29
NSMCE1-211ENST00000566087 CNTLNQ9NXG0 1405 aa16.83■□□□□ 0.28
NSMCE1-211ENST00000566087 SYCP2Q9BX26 1530 aa16.82■□□□□ 0.28
NSMCE1-211ENST00000566087 MTUS2Q5JR59 1369 aa16.81■□□□□ 0.28
NSMCE1-211ENST00000566087 NCKAP5LQ9HCH0 1330 aa16.81■□□□□ 0.28
NSMCE1-211ENST00000566087 HNRNPMP52272 730 aaKnown RBP eCLIP16.81■□□□□ 0.28
NSMCE1-211ENST00000566087 APLP2Q06481 763 aa16.81■□□□□ 0.28
NSMCE1-211ENST00000566087 MROH2AA6NES4 1674 aa16.81■□□□□ 0.28
NSMCE1-211ENST00000566087 CLTCQ00610 1675 aaKnown RBP16.81■□□□□ 0.28
NSMCE1-211ENST00000566087 ZMYM3Q14202 1370 aa16.8■□□□□ 0.28
NSMCE1-211ENST00000566087 SPAG9O60271 1321 aaKnown RBP16.79■□□□□ 0.28
NSMCE1-211ENST00000566087 GPATCH8Q9UKJ3 1502 aaKnown RBP16.78■□□□□ 0.28
NSMCE1-211ENST00000566087 NPATQ14207 1427 aa16.78■□□□□ 0.28
NSMCE1-211ENST00000566087 ZNF335Q9H4Z2 1342 aaPredicted RBP16.77■□□□□ 0.28
NSMCE1-211ENST00000566087 IQSEC2Q5JU85 1478 aa16.77■□□□□ 0.28
NSMCE1-211ENST00000566087 MYO3AQ8NEV4 1616 aa16.77■□□□□ 0.27
NSMCE1-211ENST00000566087 ATP7AQ04656 1500 aa16.76■□□□□ 0.27
NSMCE1-211ENST00000566087 VPS8Q8N3P4 1428 aa16.76■□□□□ 0.27
NSMCE1-211ENST00000566087 INO80Q9ULG1 1556 aaPredicted RBP16.74■□□□□ 0.27
NSMCE1-211ENST00000566087 A2MP01023 1474 aa16.73■□□□□ 0.27
NSMCE1-211ENST00000566087 PLXNC1O60486 1568 aa16.73■□□□□ 0.27
NSMCE1-211ENST00000566087 ZNF142P52746 1687 aaPredicted RBP16.73■□□□□ 0.27
NSMCE1-211ENST00000566087 UBAP1LF5GYI3 381 aa16.73■□□□□ 0.27
NSMCE1-211ENST00000566087 GGT6Q6P531 493 aa16.73■□□□□ 0.27
NSMCE1-211ENST00000566087 CCNB3Q8WWL7 1395 aa16.73■□□□□ 0.27
NSMCE1-211ENST00000566087 CEP170BQ9Y4F5 1589 aaPredicted RBP16.72■□□□□ 0.27
NSMCE1-211ENST00000566087 PTPRKQ15262 1439 aa16.72■□□□□ 0.27
NSMCE1-211ENST00000566087 CFDP1Q9UEE9 299 aaPredicted RBP16.72■□□□□ 0.27
NSMCE1-211ENST00000566087 KIAA1107Q9UPP5 1409 aa16.7■□□□□ 0.26
NSMCE1-211ENST00000566087 PLA2R1Q13018 1463 aa16.68■□□□□ 0.26
NSMCE1-211ENST00000566087 TCOF1Q13428 1488 aaKnown RBP16.68■□□□□ 0.26
NSMCE1-211ENST00000566087 PKD2Q13563 968 aa16.68■□□□□ 0.26
NSMCE1-211ENST00000566087 EHBP1L1Q8N3D4 1523 aa16.68■□□□□ 0.26
NSMCE1-211ENST00000566087 ZNF644Q9H582 1327 aaPredicted RBP16.68■□□□□ 0.26
NSMCE1-211ENST00000566087 PLEKHH2Q8IVE3 1493 aa16.67■□□□□ 0.26
NSMCE1-211ENST00000566087 ADGBQ8N7X0 1667 aa16.67■□□□□ 0.26
NSMCE1-211ENST00000566087 MAP3K1Q13233 1512 aa16.66■□□□□ 0.26
NSMCE1-211ENST00000566087 PPP6R1Q9UPN7 881 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms