RNA–Protein interactions for RNA: ENST00000565936.1

LINC01043-201, Transcript of long intergenic non-protein coding RNA 1043, humanhuman

TSL 1 (best) BASIC

Gene LINC01043, Length 6,897 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01043-201ENST00000565936 U2SURPO15042 1029 aaKnown RBP8.49□□□□□ -1.05
LINC01043-201ENST00000565936 CASC1Q6TDU7 716 aa8.49□□□□□ -1.05
LINC01043-201ENST00000565936 MORC1Q86VD1 984 aa8.49□□□□□ -1.05
LINC01043-201ENST00000565936 CC2D2AQ9P2K1 1620 aa8.48□□□□□ -1.05
LINC01043-201ENST00000565936 IFT140Q96RY7 1462 aa8.48□□□□□ -1.05
LINC01043-201ENST00000565936 RTF1Q92541 710 aaKnown RBP8.48□□□□□ -1.05
LINC01043-201ENST00000565936 PAK3O75914 559 aaPredicted RBP8.48□□□□□ -1.05
LINC01043-201ENST00000565936 FAM69CQ0P6D2 419 aa8.48□□□□□ -1.05
LINC01043-201ENST00000565936 LAS1LQ9Y4W2 734 aaKnown RBP8.48□□□□□ -1.05
LINC01043-201ENST00000565936 MPHOSPH9Q99550 1183 aa8.48□□□□□ -1.05
LINC01043-201ENST00000565936 CSB-PGBD3P0DP91 1061 aa8.47□□□□□ -1.05
LINC01043-201ENST00000565936 CALD1Q05682 793 aaKnown RBP8.47□□□□□ -1.05
LINC01043-201ENST00000565936 TERF2IPQ9NYB0 399 aa8.47□□□□□ -1.05
LINC01043-201ENST00000565936 HMGXB3Q12766 1538 aa8.47□□□□□ -1.05
LINC01043-201ENST00000565936 SIN3AQ96ST3 1273 aa8.47□□□□□ -1.05
LINC01043-201ENST00000565936 ROCK2O75116 1388 aaKnown RBP8.46□□□□□ -1.05
LINC01043-201ENST00000565936 SAFB2Q14151 953 aaKnown RBP eCLIP8.46□□□□□ -1.05
LINC01043-201ENST00000565936 TNNT2P45379 298 aaPredicted RBP8.45□□□□□ -1.06
LINC01043-201ENST00000565936 CC2D1BQ5T0F9 858 aaKnown RBP8.45□□□□□ -1.06
LINC01043-201ENST00000565936 GOLGA2Q08379 1002 aa8.45□□□□□ -1.06
LINC01043-201ENST00000565936 KANK4Q5T7N3 995 aaPredicted RBP8.45□□□□□ -1.06
LINC01043-201ENST00000565936 VGFO15240 615 aaPredicted RBP8.45□□□□□ -1.06
LINC01043-201ENST00000565936 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.44□□□□□ -1.06
LINC01043-201ENST00000565936 RAD54L2Q9Y4B4 1467 aa8.44□□□□□ -1.06
LINC01043-201ENST00000565936 NEUROD2Q15784 382 aa8.44□□□□□ -1.06
LINC01043-201ENST00000565936 NGDNQ8NEJ9 315 aaKnown RBP8.44□□□□□ -1.06
LINC01043-201ENST00000565936 CCDC9Q9Y3X0 531 aaKnown RBP8.44□□□□□ -1.06
LINC01043-201ENST00000565936 TMX4Q9H1E5 349 aaPredicted RBP8.43□□□□□ -1.06
LINC01043-201ENST00000565936 CFTRP13569 1480 aa8.43□□□□□ -1.06
LINC01043-201ENST00000565936 SOX12O15370 315 aa8.43□□□□□ -1.06
LINC01043-201ENST00000565936 IGF1RP08069 1367 aa8.43□□□□□ -1.06
LINC01043-201ENST00000565936 AQRO60306 1485 aaKnown RBP eCLIP8.42□□□□□ -1.06
LINC01043-201ENST00000565936 KTN1Q86UP2 1357 aaKnown RBP8.42□□□□□ -1.06
LINC01043-201ENST00000565936 OS9Q13438 667 aaPredicted RBP8.42□□□□□ -1.06
LINC01043-201ENST00000565936 CDK11BP21127 795 aaKnown RBP8.42□□□□□ -1.06
LINC01043-201ENST00000565936 CCDC144AA2RUR9 1427 aa8.41□□□□□ -1.06
LINC01043-201ENST00000565936 RAB3GAP2Q9H2M9 1393 aa8.4□□□□□ -1.06
LINC01043-201ENST00000565936 BECN1Q14457 450 aa8.4□□□□□ -1.06
LINC01043-201ENST00000565936 CUX1P39880 1505 aa8.4□□□□□ -1.06
LINC01043-201ENST00000565936 PRDM2Q13029 1718 aa8.4□□□□□ -1.06
LINC01043-201ENST00000565936 STAC3Q96MF2 364 aa8.4□□□□□ -1.06
LINC01043-201ENST00000565936 SYNJ2O15056 1496 aa8.4□□□□□ -1.06
LINC01043-201ENST00000565936 HDAC5Q9UQL6 1122 aa8.4□□□□□ -1.07
LINC01043-201ENST00000565936 MYOM3Q5VTT5 1437 aa8.4□□□□□ -1.07
LINC01043-201ENST00000565936 NCLP19338 710 aaKnown RBP8.39□□□□□ -1.07
LINC01043-201ENST00000565936 RALBP1Q15311 655 aa8.39□□□□□ -1.07
LINC01043-201ENST00000565936 CFAP44Q96MT7 982 aa8.39□□□□□ -1.07
LINC01043-201ENST00000565936 MIER1Q8N108 512 aa8.38□□□□□ -1.07
LINC01043-201ENST00000565936 IPO8O15397 1037 aaKnown RBP8.38□□□□□ -1.07
LINC01043-201ENST00000565936 PRG4Q92954 1404 aaPredicted RBP8.37□□□□□ -1.07
LINC01043-201ENST00000565936 LAMC3Q9Y6N6 1575 aa8.37□□□□□ -1.07
LINC01043-201ENST00000565936 HSPA5P11021 654 aaKnown RBP8.37□□□□□ -1.07
LINC01043-201ENST00000565936 LMOD3Q0VAK6 560 aa8.37□□□□□ -1.07
LINC01043-201ENST00000565936 DDRGK1Q96HY6 314 aa8.37□□□□□ -1.07
LINC01043-201ENST00000565936 AMPHP49418 695 aa8.37□□□□□ -1.07
LINC01043-201ENST00000565936 FOXD1Q16676 465 aa8.37□□□□□ -1.07
LINC01043-201ENST00000565936 FRAT1Q92837 279 aaPredicted RBP8.36□□□□□ -1.07
LINC01043-201ENST00000565936 EVC2Q86UK5 1308 aa8.36□□□□□ -1.07
LINC01043-201ENST00000565936 TOPBP1Q92547 1522 aa8.35□□□□□ -1.07
LINC01043-201ENST00000565936 PLEKHH2Q8IVE3 1493 aa8.35□□□□□ -1.07
LINC01043-201ENST00000565936 GOLGA6L22H0YM25 854 aa8.35□□□□□ -1.07
LINC01043-201ENST00000565936 U2AF1L5P0DN76 240 aaPredicted RBP8.35□□□□□ -1.07
LINC01043-201ENST00000565936 U2AF1Q01081 240 aaKnown RBP eCLIP8.35□□□□□ -1.07
LINC01043-201ENST00000565936 DNMBPQ6XZF7 1577 aa8.35□□□□□ -1.07
LINC01043-201ENST00000565936 EVA1CP58658 441 aa8.34□□□□□ -1.07
LINC01043-201ENST00000565936 ANP32EQ9BTT0 268 aa8.34□□□□□ -1.07
LINC01043-201ENST00000565936 POGZQ7Z3K3 1410 aa8.34□□□□□ -1.07
LINC01043-201ENST00000565936 ARHGAP5Q13017 1502 aa8.34□□□□□ -1.07
LINC01043-201ENST00000565936 NESP48681 1621 aa8.34□□□□□ -1.07
LINC01043-201ENST00000565936 ZRSR1Q15695 479 aaKnown RBP8.34□□□□□ -1.07
LINC01043-201ENST00000565936 MEX3CQ5U5Q3 659 aaKnown RBP8.34□□□□□ -1.07
LINC01043-201ENST00000565936 STK31Q9BXU1 1019 aa8.33□□□□□ -1.08
LINC01043-201ENST00000565936 CCER2I3L3R5 266 aa8.33□□□□□ -1.08
LINC01043-201ENST00000565936 ATF3P18847 181 aa8.33□□□□□ -1.08
LINC01043-201ENST00000565936 NUTM2DQ5VT03 806 aaPredicted RBP8.33□□□□□ -1.08
LINC01043-201ENST00000565936 TRAK1Q9UPV9 953 aa8.33□□□□□ -1.08
LINC01043-201ENST00000565936 ERICH3Q5RHP9 1530 aa8.33□□□□□ -1.08
LINC01043-201ENST00000565936 EFCAB5A4FU69 1503 aa8.32□□□□□ -1.08
LINC01043-201ENST00000565936 KCNJ4P48050 445 aa8.32□□□□□ -1.08
LINC01043-201ENST00000565936 FGD1P98174 961 aa8.32□□□□□ -1.08
LINC01043-201ENST00000565936 SNAPC4Q5SXM2 1469 aa8.32□□□□□ -1.08
LINC01043-201ENST00000565936 CASKIN1Q8WXD9 1431 aa8.32□□□□□ -1.08
LINC01043-201ENST00000565936 COG3Q96JB2 828 aa8.32□□□□□ -1.08
LINC01043-201ENST00000565936 FYCO1Q9BQS8 1478 aa8.32□□□□□ -1.08
LINC01043-201ENST00000565936 PHLDB1Q86UU1 1377 aa8.31□□□□□ -1.08
LINC01043-201ENST00000565936 KIF21BO75037 1637 aa8.31□□□□□ -1.08
LINC01043-201ENST00000565936 L3MBTL2Q969R5 705 aa8.31□□□□□ -1.08
LINC01043-201ENST00000565936 KIF15Q9NS87 1388 aa8.31□□□□□ -1.08
LINC01043-201ENST00000565936 RUSC2Q8N2Y8 1516 aa8.31□□□□□ -1.08
LINC01043-201ENST00000565936 DHX57Q6P158 1386 aaKnown RBP8.3□□□□□ -1.08
LINC01043-201ENST00000565936 MCCP23508 829 aa8.3□□□□□ -1.08
LINC01043-201ENST00000565936 PSME1Q06323 249 aa8.3□□□□□ -1.08
LINC01043-201ENST00000565936 C1orf141Q5JVX7 400 aa8.3□□□□□ -1.08
LINC01043-201ENST00000565936 ZNF330Q9Y3S2 320 aaPredicted RBP8.3□□□□□ -1.08
LINC01043-201ENST00000565936 CGNL1Q0VF96 1302 aa8.3□□□□□ -1.08
LINC01043-201ENST00000565936 POLA1P09884 1462 aaPredicted RBP8.29□□□□□ -1.08
LINC01043-201ENST00000565936 G3V3G9 751 aa8.29□□□□□ -1.08
LINC01043-201ENST00000565936 DCAF8Q5TAQ9 597 aa8.29□□□□□ -1.08
LINC01043-201ENST00000565936 TOP2BQ02880 1626 aa8.29□□□□□ -1.08
LINC01043-201ENST00000565936 TAF7LQ5H9L4 462 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms