RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 ZMYM4Q5VZL5 1548 aa15.44■□□□□ 0.06
VPS9D1-205ENST00000565452 EFCAB2Q5VUJ9 269 aa15.44■□□□□ 0.06
VPS9D1-205ENST00000565452 PRXQ9BXM0 1461 aa15.44■□□□□ 0.06
VPS9D1-205ENST00000565452 RICTORQ6R327 1708 aa15.43■□□□□ 0.06
VPS9D1-205ENST00000565452 ARHGEF12Q9NZN5 1544 aa15.43■□□□□ 0.06
VPS9D1-205ENST00000565452 PREX1Q8TCU6 1659 aa15.42■□□□□ 0.06
VPS9D1-205ENST00000565452 C9orf84Q5VXU9 1444 aa15.42■□□□□ 0.06
VPS9D1-205ENST00000565452 SETD1BQ9UPS6 1966 aaKnown RBP15.42■□□□□ 0.06
VPS9D1-205ENST00000565452 STRCQ7RTU9 1775 aa15.41■□□□□ 0.06
VPS9D1-205ENST00000565452 CFAP74Q9C0B2 1584 aa15.4■□□□□ 0.06
VPS9D1-205ENST00000565452 NUP153P49790 1475 aaKnown RBP15.4■□□□□ 0.06
VPS9D1-205ENST00000565452 HECW1Q76N89 1606 aa15.39■□□□□ 0.05
VPS9D1-205ENST00000565452 LTBP4Q8N2S1 1624 aa15.39■□□□□ 0.05
VPS9D1-205ENST00000565452 RAPGEF6Q8TEU7 1601 aa15.39■□□□□ 0.05
VPS9D1-205ENST00000565452 FER1L4A9Z1Z3 1794 aa15.39■□□□□ 0.05
VPS9D1-205ENST00000565452 RANGAP1P46060 587 aaPredicted RBP15.39■□□□□ 0.05
VPS9D1-205ENST00000565452 PLCH2O75038 1416 aa15.38■□□□□ 0.05
VPS9D1-205ENST00000565452 TRAPPC8Q9Y2L5 1435 aa15.38■□□□□ 0.05
VPS9D1-205ENST00000565452 AFAP1Q8N556 730 aa15.37■□□□□ 0.05
VPS9D1-205ENST00000565452 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.37■□□□□ 0.05
VPS9D1-205ENST00000565452 SIGLEC1Q9BZZ2 1709 aa15.35■□□□□ 0.05
VPS9D1-205ENST00000565452 ZNF335Q9H4Z2 1342 aaPredicted RBP15.34■□□□□ 0.05
VPS9D1-205ENST00000565452 NCKAP5LQ9HCH0 1330 aa15.34■□□□□ 0.05
VPS9D1-205ENST00000565452 CSRNP3Q8WYN3 585 aa15.33■□□□□ 0.04
VPS9D1-205ENST00000565452 PHF23Q9BUL5 403 aaPredicted RBP15.33■□□□□ 0.04
VPS9D1-205ENST00000565452 NCOA1Q15788 1441 aa15.33■□□□□ 0.04
VPS9D1-205ENST00000565452 TOM1O60784 492 aa15.32■□□□□ 0.04
VPS9D1-205ENST00000565452 HSPA1LP34931 641 aa15.32■□□□□ 0.04
VPS9D1-205ENST00000565452 PKD2Q13563 968 aa15.32■□□□□ 0.04
VPS9D1-205ENST00000565452 CDK11AQ9UQ88 783 aaPredicted RBP15.32■□□□□ 0.04
VPS9D1-205ENST00000565452 SCAF1Q9H7N4 1312 aaKnown RBP15.32■□□□□ 0.04
VPS9D1-205ENST00000565452 PIP4K2BP78356 416 aa15.3■□□□□ 0.04
VPS9D1-205ENST00000565452 SAMD9Q5K651 1589 aa15.28■□□□□ 0.04
VPS9D1-205ENST00000565452 ATP1B4Q9UN42 357 aaPredicted RBP15.28■□□□□ 0.04
VPS9D1-205ENST00000565452 ZNF518AQ6AHZ1 1483 aa15.27■□□□□ 0.04
VPS9D1-205ENST00000565452 CNTLNQ9NXG0 1405 aa15.26■□□□□ 0.03
VPS9D1-205ENST00000565452 PPP6R1Q9UPN7 881 aa15.24■□□□□ 0.03
VPS9D1-205ENST00000565452 ZMYM3Q14202 1370 aa15.23■□□□□ 0.03
VPS9D1-205ENST00000565452 CAMSAP1Q5T5Y3 1602 aa15.21■□□□□ 0.03
VPS9D1-205ENST00000565452 NPATQ14207 1427 aa15.21■□□□□ 0.03
VPS9D1-205ENST00000565452 AGLP35573 1532 aa15.19■□□□□ 0.02
VPS9D1-205ENST00000565452 MLH3Q9UHC1 1453 aa15.19■□□□□ 0.02
VPS9D1-205ENST00000565452 MED1Q15648 1581 aaPredicted RBP15.18■□□□□ 0.02
VPS9D1-205ENST00000565452 C3P01024 1663 aa15.17■□□□□ 0.02
VPS9D1-205ENST00000565452 REREQ9P2R6 1566 aa15.16■□□□□ 0.02
VPS9D1-205ENST00000565452 CDK13Q14004 1512 aaKnown RBP15.15■□□□□ 0.02
VPS9D1-205ENST00000565452 PLA2R1Q13018 1463 aa15.14■□□□□ 0.01
VPS9D1-205ENST00000565452 ARHGAP5Q13017 1502 aa15.14■□□□□ 0.01
VPS9D1-205ENST00000565452 KDM5CP41229 1560 aa15.14■□□□□ 0.01
VPS9D1-205ENST00000565452 DIP2CQ9Y2E4 1556 aa15.13■□□□□ 0.01
VPS9D1-205ENST00000565452 TCOF1Q13428 1488 aaKnown RBP15.11■□□□□ 0.01
VPS9D1-205ENST00000565452 CLIP1P30622 1438 aa15.1■□□□□ 0.01
VPS9D1-205ENST00000565452 PTPRKQ15262 1439 aa15.1■□□□□ 0.01
VPS9D1-205ENST00000565452 GGT6Q6P531 493 aa15.1■□□□□ 0.01
VPS9D1-205ENST00000565452 TROQ12816 1431 aaPredicted RBP15.09■□□□□ 0.01
VPS9D1-205ENST00000565452 ANKLE2Q86XL3 938 aa15.08■□□□□ 0
VPS9D1-205ENST00000565452 SPAG9O60271 1321 aaKnown RBP15.08■□□□□ 0
VPS9D1-205ENST00000565452 MYO5CQ9NQX4 1742 aa15.07■□□□□ 0
VPS9D1-205ENST00000565452 SENP3Q9H4L4 574 aaPredicted RBP15.07■□□□□ 0
VPS9D1-205ENST00000565452 FMN1Q68DA7 1419 aa15.07■□□□□ 0
VPS9D1-205ENST00000565452 CPS1P31327 1500 aa15.07■□□□□ 0
VPS9D1-205ENST00000565452 RGS17Q9UGC6 210 aaPredicted RBP15.06■□□□□ 0
VPS9D1-205ENST00000565452 SHANK2Q9UPX8 1470 aa15.06■□□□□ 0
VPS9D1-205ENST00000565452 ZNF777Q9ULD5 760 aaPredicted RBP15.05■□□□□ -0
VPS9D1-205ENST00000565452 ABCA6Q8N139 1617 aa15.05■□□□□ -0
VPS9D1-205ENST00000565452 THEMISQ8N1K5 641 aaPredicted RBP15.04■□□□□ -0
VPS9D1-205ENST00000565452 EEA1Q15075 1411 aa15.02■□□□□ -0
VPS9D1-205ENST00000565452 UBTFP17480 764 aaKnown RBP15.02■□□□□ -0
VPS9D1-205ENST00000565452 HNRNPMP52272 730 aaKnown RBP eCLIP15.02■□□□□ -0
VPS9D1-205ENST00000565452 KIF14Q15058 1648 aa15.02□□□□□ -0.01
VPS9D1-205ENST00000565452 CEP170BQ9Y4F5 1589 aaPredicted RBP15□□□□□ -0.01
VPS9D1-205ENST00000565452 A2ML1A8K2U0 1454 aa15□□□□□ -0.01
VPS9D1-205ENST00000565452 MROH2AA6NES4 1674 aa15□□□□□ -0.01
VPS9D1-205ENST00000565452 FBXO31Q5XUX0 539 aaPredicted RBP14.96□□□□□ -0.01
VPS9D1-205ENST00000565452 POTEAQ6S8J7 498 aa14.96□□□□□ -0.01
VPS9D1-205ENST00000565452 KIDINS220Q9ULH0 1771 aa14.96□□□□□ -0.02
VPS9D1-205ENST00000565452 ABCC1P33527 1531 aa14.95□□□□□ -0.02
VPS9D1-205ENST00000565452 MYO3AQ8NEV4 1616 aa14.94□□□□□ -0.02
VPS9D1-205ENST00000565452 TNRQ92752 1358 aa14.94□□□□□ -0.02
VPS9D1-205ENST00000565452 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.94□□□□□ -0.02
VPS9D1-205ENST00000565452 A2MP01023 1474 aa14.94□□□□□ -0.02
VPS9D1-205ENST00000565452 ZNF142P52746 1687 aaPredicted RBP14.93□□□□□ -0.02
VPS9D1-205ENST00000565452 EHMT2Q96KQ7 1210 aa14.93□□□□□ -0.02
VPS9D1-205ENST00000565452 CFDP1Q9UEE9 299 aaPredicted RBP14.92□□□□□ -0.02
VPS9D1-205ENST00000565452 CDC42BPBQ9Y5S2 1711 aa14.92□□□□□ -0.02
VPS9D1-205ENST00000565452 SAMD9LQ8IVG5 1584 aa14.91□□□□□ -0.02
VPS9D1-205ENST00000565452 DNMT1P26358 1616 aaKnown RBP14.91□□□□□ -0.02
VPS9D1-205ENST00000565452 NPHP4O75161 1426 aaPredicted RBP14.91□□□□□ -0.02
VPS9D1-205ENST00000565452 CLTCQ00610 1675 aaKnown RBP14.9□□□□□ -0.02
VPS9D1-205ENST00000565452 SUPT6HQ7KZ85 1726 aaKnown RBP14.9□□□□□ -0.02
VPS9D1-205ENST00000565452 WASHC2CQ9Y4E1 1318 aa14.9□□□□□ -0.02
VPS9D1-205ENST00000565452 KIAA1107Q9UPP5 1409 aa14.89□□□□□ -0.03
VPS9D1-205ENST00000565452 ARHGAP35Q9NRY4 1499 aa14.88□□□□□ -0.03
VPS9D1-205ENST00000565452 ITSN2Q9NZM3 1697 aa14.87□□□□□ -0.03
VPS9D1-205ENST00000565452 MIA2Q96PC5 1412 aa14.87□□□□□ -0.03
VPS9D1-205ENST00000565452 KIF3BO15066 747 aa14.87□□□□□ -0.03
VPS9D1-205ENST00000565452 ALKQ9UM73 1620 aa14.87□□□□□ -0.03
VPS9D1-205ENST00000565452 MED14O60244 1454 aa14.87□□□□□ -0.03
VPS9D1-205ENST00000565452 LRRC7Q96NW7 1537 aa14.87□□□□□ -0.03
VPS9D1-205ENST00000565452 VWDEQ8N2E2 1590 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms