RNA–Protein interactions for RNA: ENST00000565018.6

TCF4-226, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 2,357 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-226ENST00000565018 CLASP1Q7Z460 1538 aa13.24□□□□□ -0.29
TCF4-226ENST00000565018 CROCC2H7BZ55 1655 aa13.23□□□□□ -0.29
TCF4-226ENST00000565018 SIN3AQ96ST3 1273 aa13.23□□□□□ -0.29
TCF4-226ENST00000565018 ADGBQ8N7X0 1667 aa13.23□□□□□ -0.29
TCF4-226ENST00000565018 DENND4BO75064 1496 aaPredicted RBP13.23□□□□□ -0.29
TCF4-226ENST00000565018 CDC42BPAQ5VT25 1732 aa13.23□□□□□ -0.29
TCF4-226ENST00000565018 PLEKHD1A6NEE1 506 aa13.22□□□□□ -0.29
TCF4-226ENST00000565018 KDM6BO15054 1643 aa13.22□□□□□ -0.29
TCF4-226ENST00000565018 SHANK2Q9UPX8 1470 aa13.21□□□□□ -0.29
TCF4-226ENST00000565018 PPP1R15AO75807 674 aaPredicted RBP13.21□□□□□ -0.3
TCF4-226ENST00000565018 RRP7BPQ9NSQ0 103 aa13.21□□□□□ -0.3
TCF4-226ENST00000565018 CFDP1Q9UEE9 299 aaPredicted RBP13.21□□□□□ -0.3
TCF4-226ENST00000565018 ABCC2Q92887 1545 aa13.19□□□□□ -0.3
TCF4-226ENST00000565018 NCOA1Q15788 1441 aa13.19□□□□□ -0.3
TCF4-226ENST00000565018 CHIC2Q9UKJ5 165 aa13.18□□□□□ -0.3
TCF4-226ENST00000565018 ZNF644Q9H582 1327 aaPredicted RBP13.18□□□□□ -0.3
TCF4-226ENST00000565018 ARHGEF5Q12774 1597 aa13.18□□□□□ -0.3
TCF4-226ENST00000565018 KDM5BQ9UGL1 1544 aa13.17□□□□□ -0.3
TCF4-226ENST00000565018 TONSLQ96HA7 1378 aa13.17□□□□□ -0.3
TCF4-226ENST00000565018 UHRF1BP1LA0JNW5 1464 aa13.17□□□□□ -0.3
TCF4-226ENST00000565018 NEUROD1Q13562 356 aa13.16□□□□□ -0.3
TCF4-226ENST00000565018 PREX2Q70Z35 1606 aa13.16□□□□□ -0.3
TCF4-226ENST00000565018 MIER1Q8N108 512 aa13.15□□□□□ -0.3
TCF4-226ENST00000565018 ERCC6L2Q5T890 1561 aa13.14□□□□□ -0.31
TCF4-226ENST00000565018 MPHOSPH9Q99550 1183 aa13.14□□□□□ -0.31
TCF4-226ENST00000565018 ANKRD30AQ9BXX3 1397 aa13.13□□□□□ -0.31
TCF4-226ENST00000565018 CENPBP07199 599 aaPredicted RBP13.12□□□□□ -0.31
TCF4-226ENST00000565018 MBD5Q9P267 1494 aa13.12□□□□□ -0.31
TCF4-226ENST00000565018 CDC42BPBQ9Y5S2 1711 aa13.11□□□□□ -0.31
TCF4-226ENST00000565018 ANKRD30BQ9BXX2 1392 aa13.11□□□□□ -0.31
TCF4-226ENST00000565018 RSPH4AQ5TD94 716 aa13.1□□□□□ -0.31
TCF4-226ENST00000565018 TRIM52Q96A61 297 aa13.1□□□□□ -0.31
TCF4-226ENST00000565018 PZPP20742 1482 aa13.1□□□□□ -0.31
TCF4-226ENST00000565018 RPRD2Q5VT52 1461 aaKnown RBP13.1□□□□□ -0.31
TCF4-226ENST00000565018 C9orf84Q5VXU9 1444 aa13.1□□□□□ -0.31
TCF4-226ENST00000565018 SAMD9LQ8IVG5 1584 aa13.1□□□□□ -0.31
TCF4-226ENST00000565018 KDM5DQ9BY66 1539 aa13.1□□□□□ -0.31
TCF4-226ENST00000565018 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.09□□□□□ -0.31
TCF4-226ENST00000565018 MAST1Q9Y2H9 1570 aa13.09□□□□□ -0.31
TCF4-226ENST00000565018 CCDC141Q6ZP82 1450 aa13.08□□□□□ -0.32
TCF4-226ENST00000565018 ANKRD50Q9ULJ7 1429 aa13.08□□□□□ -0.32
TCF4-226ENST00000565018 TTC37Q6PGP7 1564 aa13.08□□□□□ -0.32
TCF4-226ENST00000565018 PLEKHH2Q8IVE3 1493 aa13.07□□□□□ -0.32
TCF4-226ENST00000565018 KIAA1107Q9UPP5 1409 aa13.07□□□□□ -0.32
TCF4-226ENST00000565018 ZCCHC11Q5TAX3 1644 aaKnown RBP13.07□□□□□ -0.32
TCF4-226ENST00000565018 ZNF777Q9ULD5 760 aaPredicted RBP13.06□□□□□ -0.32
TCF4-226ENST00000565018 MYO5CQ9NQX4 1742 aa13.06□□□□□ -0.32
TCF4-226ENST00000565018 TEX14Q8IWB6 1497 aa13.05□□□□□ -0.32
TCF4-226ENST00000565018 ARAP3Q8WWN8 1544 aa13.04□□□□□ -0.32
TCF4-226ENST00000565018 TSPY4P0CV99 314 aa13.04□□□□□ -0.32
TCF4-226ENST00000565018 TSPY10P0CW01 314 aa13.04□□□□□ -0.32
TCF4-226ENST00000565018 SLC4A1APQ9BWU0 796 aaKnown RBP13.03□□□□□ -0.32
TCF4-226ENST00000565018 ARHGAP5Q13017 1502 aa13.02□□□□□ -0.33
TCF4-226ENST00000565018 PLXNC1O60486 1568 aa13.02□□□□□ -0.33
TCF4-226ENST00000565018 PLCH2O75038 1416 aa13.02□□□□□ -0.33
TCF4-226ENST00000565018 KIF15Q9NS87 1388 aa13.01□□□□□ -0.33
TCF4-226ENST00000565018 SYCP2Q9BX26 1530 aa13.01□□□□□ -0.33
TCF4-226ENST00000565018 SCAF1Q9H7N4 1312 aaKnown RBP12.99□□□□□ -0.33
TCF4-226ENST00000565018 HNRNPMP52272 730 aaKnown RBP eCLIP12.98□□□□□ -0.337e-6■■■□□ 17
TCF4-226ENST00000565018 L3MBTL2Q969R5 705 aa12.98□□□□□ -0.33
TCF4-226ENST00000565018 UNC13BO14795 1591 aa12.98□□□□□ -0.33
TCF4-226ENST00000565018 ABCC1P33527 1531 aa12.97□□□□□ -0.33
TCF4-226ENST00000565018 FOXD1Q16676 465 aa12.96□□□□□ -0.33
TCF4-226ENST00000565018 NUP155O75694 1391 aa12.95□□□□□ -0.34
TCF4-226ENST00000565018 WDR7Q9Y4E6 1490 aa12.95□□□□□ -0.34
TCF4-226ENST00000565018 ARHGEF12Q9NZN5 1544 aa12.94□□□□□ -0.34
TCF4-226ENST00000565018 MAGI2Q86UL8 1455 aa12.94□□□□□ -0.34
TCF4-226ENST00000565018 DUOX2Q9NRD8 1548 aa12.94□□□□□ -0.34
TCF4-226ENST00000565018 PKD2Q13563 968 aa12.94□□□□□ -0.34
TCF4-226ENST00000565018 EFCAB2Q5VUJ9 269 aa12.93□□□□□ -0.34
TCF4-226ENST00000565018 FAM135AQ9P2D6 1515 aa12.93□□□□□ -0.34
TCF4-226ENST00000565018 ERBINQ96RT1 1412 aa12.93□□□□□ -0.34
TCF4-226ENST00000565018 DDX10Q13206 875 aaKnown RBP12.93□□□□□ -0.34
TCF4-226ENST00000565018 ABCA9Q8IUA7 1624 aa12.93□□□□□ -0.34
TCF4-226ENST00000565018 UHRF1BP1Q6BDS2 1440 aa12.92□□□□□ -0.34
TCF4-226ENST00000565018 EIF4G2P78344 907 aaKnown RBP eCLIP12.92□□□□□ -0.342e-7■■■■■ 31.9
TCF4-226ENST00000565018 RTEL1-TNFRSF6BF6WH68 1400 aa12.92□□□□□ -0.34
TCF4-226ENST00000565018 IQGAP3Q86VI3 1631 aa12.91□□□□□ -0.34
TCF4-226ENST00000565018 SPATA31E1Q6ZUB1 1445 aa12.91□□□□□ -0.34
TCF4-226ENST00000565018 CCER2I3L3R5 266 aa12.89□□□□□ -0.35
TCF4-226ENST00000565018 YTHDC1Q96MU7 727 aaKnown RBP12.89□□□□□ -0.35
TCF4-226ENST00000565018 HSPA5P11021 654 aaKnown RBP12.89□□□□□ -0.35
TCF4-226ENST00000565018 NBPF8Q3BBV2 869 aa12.89□□□□□ -0.35
TCF4-226ENST00000565018 POLR1AO95602 1720 aaPredicted RBP12.88□□□□□ -0.35
TCF4-226ENST00000565018 ATP10AO60312 1499 aa12.88□□□□□ -0.35
TCF4-226ENST00000565018 KCNH8Q96L42 1107 aa12.88□□□□□ -0.35
TCF4-226ENST00000565018 OSCARQ8IYS5 282 aa12.87□□□□□ -0.35
TCF4-226ENST00000565018 HIRIP3Q9BW71 556 aaPredicted RBP12.87□□□□□ -0.35
TCF4-226ENST00000565018 ZFYVE16Q7Z3T8 1539 aa12.86□□□□□ -0.35
TCF4-226ENST00000565018 TRAPPC8Q9Y2L5 1435 aa12.86□□□□□ -0.35
TCF4-226ENST00000565018 RALGAPBQ86X10 1494 aa12.86□□□□□ -0.35
TCF4-226ENST00000565018 WASHC2AQ641Q2 1341 aa12.86□□□□□ -0.35
TCF4-226ENST00000565018 SLC24A1O60721 1099 aa12.86□□□□□ -0.35
TCF4-226ENST00000565018 ASXL2Q76L83 1435 aa12.84□□□□□ -0.35
TCF4-226ENST00000565018 INO80Q9ULG1 1556 aaPredicted RBP12.84□□□□□ -0.35
TCF4-226ENST00000565018 ANP32CO43423 234 aa12.84□□□□□ -0.35
TCF4-226ENST00000565018 GTF3C3Q9Y5Q9 886 aa12.84□□□□□ -0.35
TCF4-226ENST00000565018 FANCAO15360 1455 aa12.84□□□□□ -0.35
TCF4-226ENST00000565018 DEPDC5O75140 1603 aa12.83□□□□□ -0.36
TCF4-226ENST00000565018 CCDC7Q96M83 1385 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms