RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 UGGT2Q9NYU1 1516 aa10.64□□□□□ -0.71
ATXN3-249ENST00000564606 IQGAP2Q13576 1575 aa10.64□□□□□ -0.71
ATXN3-249ENST00000564606 TDRD9Q8NDG6 1382 aaKnown RBP10.64□□□□□ -0.71
ATXN3-249ENST00000564606 IFT140Q96RY7 1462 aa10.63□□□□□ -0.71
ATXN3-249ENST00000564606 FBLN2P98095 1184 aa10.63□□□□□ -0.71
ATXN3-249ENST00000564606 ERICH6BQ5W0A0 696 aa10.63□□□□□ -0.71
ATXN3-249ENST00000564606 SUPT16HQ9Y5B9 1047 aaKnown RBP10.63□□□□□ -0.71
ATXN3-249ENST00000564606 NAIPQ13075 1403 aa10.63□□□□□ -0.71
ATXN3-249ENST00000564606 ROCK1Q13464 1354 aa10.63□□□□□ -0.71
ATXN3-249ENST00000564606 ARHGEF11O15085 1522 aa10.63□□□□□ -0.71
ATXN3-249ENST00000564606 NESP48681 1621 aa10.62□□□□□ -0.71
ATXN3-249ENST00000564606 MRC2Q9UBG0 1479 aa10.62□□□□□ -0.71
ATXN3-249ENST00000564606 DDX10Q13206 875 aaKnown RBP10.62□□□□□ -0.71
ATXN3-249ENST00000564606 TARBP1Q13395 1621 aaKnown RBP10.6□□□□□ -0.71
ATXN3-249ENST00000564606 SIN3AQ96ST3 1273 aa10.6□□□□□ -0.71
ATXN3-249ENST00000564606 EIF4G2P78344 907 aaKnown RBP eCLIP10.59□□□□□ -0.71
ATXN3-249ENST00000564606 GCC2Q8IWJ2 1684 aa10.59□□□□□ -0.71
ATXN3-249ENST00000564606 EPRSP07814 1512 aaKnown RBP10.58□□□□□ -0.72
ATXN3-249ENST00000564606 KIAA0586Q9BVV6 1533 aa10.58□□□□□ -0.72
ATXN3-249ENST00000564606 ADAMTS12P58397 1594 aa10.58□□□□□ -0.72
ATXN3-249ENST00000564606 AMER1Q5JTC6 1135 aaPredicted RBP10.58□□□□□ -0.72
ATXN3-249ENST00000564606 TRIM52Q96A61 297 aa10.57□□□□□ -0.72
ATXN3-249ENST00000564606 PBRM1Q86U86 1689 aa10.57□□□□□ -0.72
ATXN3-249ENST00000564606 CARMIL2Q6F5E8 1435 aa10.55□□□□□ -0.72
ATXN3-249ENST00000564606 ARID4BQ4LE39 1312 aaPredicted RBP10.54□□□□□ -0.72
ATXN3-249ENST00000564606 WDR62O43379 1518 aa10.53□□□□□ -0.72
ATXN3-249ENST00000564606 MAGI1Q96QZ7 1491 aaPredicted RBP10.51□□□□□ -0.73
ATXN3-249ENST00000564606 MPHOSPH9Q99550 1183 aa10.51□□□□□ -0.73
ATXN3-249ENST00000564606 CACNB1Q02641 598 aaPredicted RBP10.5□□□□□ -0.73
ATXN3-249ENST00000564606 ITSN2Q9NZM3 1697 aa10.5□□□□□ -0.73
ATXN3-249ENST00000564606 DAPK1P53355 1430 aa10.5□□□□□ -0.73
ATXN3-249ENST00000564606 PTPRKQ15262 1439 aa10.5□□□□□ -0.73
ATXN3-249ENST00000564606 DNMT1P26358 1616 aaKnown RBP10.48□□□□□ -0.73
ATXN3-249ENST00000564606 RSPH4AQ5TD94 716 aa10.48□□□□□ -0.73
ATXN3-249ENST00000564606 OSCARQ8IYS5 282 aa10.48□□□□□ -0.73
ATXN3-249ENST00000564606 RRP7BPQ9NSQ0 103 aa10.48□□□□□ -0.73
ATXN3-249ENST00000564606 ROCK2O75116 1388 aaKnown RBP10.48□□□□□ -0.73
ATXN3-249ENST00000564606 ANKRD30AQ9BXX3 1397 aa10.48□□□□□ -0.73
ATXN3-249ENST00000564606 TROQ12816 1431 aaPredicted RBP10.48□□□□□ -0.73
ATXN3-249ENST00000564606 KIAA0556O60303 1618 aa10.47□□□□□ -0.73
ATXN3-249ENST00000564606 RAPGEF6Q8TEU7 1601 aa10.47□□□□□ -0.73
ATXN3-249ENST00000564606 ZBTB12Q9Y330 459 aaPredicted RBP10.47□□□□□ -0.73
ATXN3-249ENST00000564606 CNTLNQ9NXG0 1405 aa10.47□□□□□ -0.73
ATXN3-249ENST00000564606 RPRD2Q5VT52 1461 aaKnown RBP10.47□□□□□ -0.73
ATXN3-249ENST00000564606 GRIN2AQ12879 1464 aa10.46□□□□□ -0.74
ATXN3-249ENST00000564606 LRRIQ1Q96JM4 1722 aa10.45□□□□□ -0.74
ATXN3-249ENST00000564606 HSPA5P11021 654 aaKnown RBP10.45□□□□□ -0.74
ATXN3-249ENST00000564606 CHMP7Q8WUX9 453 aaPredicted RBP10.45□□□□□ -0.74
ATXN3-249ENST00000564606 CFDP1Q9UEE9 299 aaPredicted RBP10.45□□□□□ -0.74
ATXN3-249ENST00000564606 CHIC2Q9UKJ5 165 aa10.45□□□□□ -0.74
ATXN3-249ENST00000564606 ADGRL2O95490 1459 aa10.44□□□□□ -0.74
ATXN3-249ENST00000564606 KTN1Q86UP2 1357 aaKnown RBP10.44□□□□□ -0.74
ATXN3-249ENST00000564606 ANKRD30BQ9BXX2 1392 aa10.44□□□□□ -0.74
ATXN3-249ENST00000564606 PLEKHD1A6NEE1 506 aa10.44□□□□□ -0.74
ATXN3-249ENST00000564606 SYNJ2O15056 1496 aa10.43□□□□□ -0.74
ATXN3-249ENST00000564606 TSPY4P0CV99 314 aa10.43□□□□□ -0.74
ATXN3-249ENST00000564606 TSPY10P0CW01 314 aa10.43□□□□□ -0.74
ATXN3-249ENST00000564606 MAGI3Q5TCQ9 1506 aa10.43□□□□□ -0.74
ATXN3-249ENST00000564606 SHANK2Q9UPX8 1470 aa10.42□□□□□ -0.74
ATXN3-249ENST00000564606 ABCC5O15440 1437 aa10.42□□□□□ -0.74
ATXN3-249ENST00000564606 NCOA1Q15788 1441 aa10.42□□□□□ -0.74
ATXN3-249ENST00000564606 HNRNPUQ00839 825 aaKnown RBP eCLIP10.42□□□□□ -0.74
ATXN3-249ENST00000564606 CDK13Q14004 1512 aaKnown RBP10.42□□□□□ -0.74
ATXN3-249ENST00000564606 CCDC7Q96M83 1385 aa10.41□□□□□ -0.74
ATXN3-249ENST00000564606 ADGBQ8N7X0 1667 aa10.41□□□□□ -0.74
ATXN3-249ENST00000564606 ADCY10Q96PN6 1610 aa10.41□□□□□ -0.74
ATXN3-249ENST00000564606 VASPP50552 380 aaPredicted RBP10.41□□□□□ -0.74
ATXN3-249ENST00000564606 L3MBTL2Q969R5 705 aa10.41□□□□□ -0.74
ATXN3-249ENST00000564606 FBXO3Q9UK99 471 aa10.41□□□□□ -0.74
ATXN3-249ENST00000564606 MYT1LQ9UL68 1186 aa10.41□□□□□ -0.74
ATXN3-249ENST00000564606 DISP1Q96F81 1524 aa10.41□□□□□ -0.74
ATXN3-249ENST00000564606 NUP153P49790 1475 aaKnown RBP10.41□□□□□ -0.74
ATXN3-249ENST00000564606 ERCC6Q03468 1493 aa10.41□□□□□ -0.74
ATXN3-249ENST00000564606 KIAA1107Q9UPP5 1409 aa10.41□□□□□ -0.74
ATXN3-249ENST00000564606 IFNLR1Q8IU57 520 aaPredicted RBP10.4□□□□□ -0.74
ATXN3-249ENST00000564606 TSHZ2Q9NRE2 1034 aa10.4□□□□□ -0.74
ATXN3-249ENST00000564606 ZBED9Q6R2W3 1325 aa10.39□□□□□ -0.75
ATXN3-249ENST00000564606 SSUH2Q9Y2M2 353 aa10.39□□□□□ -0.75
ATXN3-249ENST00000564606 WASHC2AQ641Q2 1341 aa10.38□□□□□ -0.75
ATXN3-249ENST00000564606 CAMSAP2Q08AD1 1489 aa10.38□□□□□ -0.75
ATXN3-249ENST00000564606 ZNF692Q9BU19 519 aaPredicted RBP10.38□□□□□ -0.75
ATXN3-249ENST00000564606 PPP4R2Q9NY27 417 aa10.38□□□□□ -0.75
ATXN3-249ENST00000564606 ARHGEF12Q9NZN5 1544 aa10.38□□□□□ -0.75
ATXN3-249ENST00000564606 KDM5BQ9UGL1 1544 aa10.38□□□□□ -0.75
ATXN3-249ENST00000564606 PRKRIP1Q9H875 184 aaPredicted RBP10.37□□□□□ -0.75
ATXN3-249ENST00000564606 KIF14Q15058 1648 aa10.36□□□□□ -0.75
ATXN3-249ENST00000564606 EIF4G3O43432 1585 aaKnown RBP10.36□□□□□ -0.75
ATXN3-249ENST00000564606 ANP32EQ9BTT0 268 aa10.36□□□□□ -0.75
ATXN3-249ENST00000564606 MRS2Q9HD23 443 aa10.36□□□□□ -0.75
ATXN3-249ENST00000564606 TEX14Q8IWB6 1497 aa10.36□□□□□ -0.75
ATXN3-249ENST00000564606 POLR1AO95602 1720 aaPredicted RBP10.36□□□□□ -0.75
ATXN3-249ENST00000564606 NUP160Q12769 1436 aa10.35□□□□□ -0.75
ATXN3-249ENST00000564606 ANKRD50Q9ULJ7 1429 aa10.35□□□□□ -0.75
ATXN3-249ENST00000564606 GPATCH8Q9UKJ3 1502 aaKnown RBP10.35□□□□□ -0.75
ATXN3-249ENST00000564606 JPH4Q96JJ6 628 aa10.35□□□□□ -0.75
ATXN3-249ENST00000564606 KCNH8Q96L42 1107 aa10.35□□□□□ -0.75
ATXN3-249ENST00000564606 HIRIP3Q9BW71 556 aaPredicted RBP10.35□□□□□ -0.75
ATXN3-249ENST00000564606 UHRF1BP1Q6BDS2 1440 aa10.34□□□□□ -0.75
ATXN3-249ENST00000564606 SLC24A1O60721 1099 aa10.34□□□□□ -0.75
ATXN3-249ENST00000564606 ERICH6Q7L0X2 663 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms