RNA–Protein interactions for RNA: ENST00000564278.1

NUP93-209, Transcript of nucleoporin 93, humanhuman

TSL 2

Gene NUP93, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP93-209ENST00000564278 ARHGEF12Q9NZN5 1544 aa11.4□□□□□ -0.59
NUP93-209ENST00000564278 MLECQ14165 292 aa11.38□□□□□ -0.59
NUP93-209ENST00000564278 POGZQ7Z3K3 1410 aa11.37□□□□□ -0.59
NUP93-209ENST00000564278 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.34□□□□□ -0.59
NUP93-209ENST00000564278 HNRNPUL2Q1KMD3 747 aaKnown RBP11.34□□□□□ -0.59
NUP93-209ENST00000564278 CDK13Q14004 1512 aaKnown RBP11.34□□□□□ -0.59
NUP93-209ENST00000564278 CEBPAP49715 358 aaPredicted RBP11.33□□□□□ -0.6
NUP93-209ENST00000564278 LTBP4Q8N2S1 1624 aa11.33□□□□□ -0.6
NUP93-209ENST00000564278 MAGI2Q86UL8 1455 aa11.32□□□□□ -0.6
NUP93-209ENST00000564278 C9orf84Q5VXU9 1444 aa11.31□□□□□ -0.6
NUP93-209ENST00000564278 UHRF1BP1Q6BDS2 1440 aa11.29□□□□□ -0.6
NUP93-209ENST00000564278 SCAPERQ9BY12 1400 aa11.29□□□□□ -0.6
NUP93-209ENST00000564278 C3P01024 1663 aa11.29□□□□□ -0.6
NUP93-209ENST00000564278 DIP2CQ9Y2E4 1556 aa11.28□□□□□ -0.6
NUP93-209ENST00000564278 ATP10AO60312 1499 aa11.28□□□□□ -0.6
NUP93-209ENST00000564278 RANGAP1P46060 587 aaPredicted RBP11.28□□□□□ -0.6
NUP93-209ENST00000564278 ABCA6Q8N139 1617 aa11.27□□□□□ -0.6
NUP93-209ENST00000564278 KDM5CP41229 1560 aa11.27□□□□□ -0.61
NUP93-209ENST00000564278 KIF14Q15058 1648 aa11.27□□□□□ -0.61
NUP93-209ENST00000564278 MYO5CQ9NQX4 1742 aa11.26□□□□□ -0.61
NUP93-209ENST00000564278 PTPRTO14522 1441 aa11.25□□□□□ -0.61
NUP93-209ENST00000564278 PLCH2O75038 1416 aa11.25□□□□□ -0.61
NUP93-209ENST00000564278 NCOA1Q15788 1441 aa11.24□□□□□ -0.61
NUP93-209ENST00000564278 PLEKHD1A6NEE1 506 aa11.23□□□□□ -0.61
NUP93-209ENST00000564278 IQSEC2Q5JU85 1478 aa11.22□□□□□ -0.61
NUP93-209ENST00000564278 ZNF518AQ6AHZ1 1483 aa11.22□□□□□ -0.61
NUP93-209ENST00000564278 REREQ9P2R6 1566 aa11.21□□□□□ -0.61
NUP93-209ENST00000564278 FAM9AQ8IZU1 332 aaPredicted RBP11.21□□□□□ -0.61
NUP93-209ENST00000564278 SETD1BQ9UPS6 1966 aaKnown RBP11.21□□□□□ -0.62
NUP93-209ENST00000564278 DMRT2Q9Y5R5 561 aa11.2□□□□□ -0.62
NUP93-209ENST00000564278 CAMSAP1Q5T5Y3 1602 aa11.2□□□□□ -0.62
NUP93-209ENST00000564278 ARHGAP5Q13017 1502 aa11.19□□□□□ -0.62
NUP93-209ENST00000564278 MED1Q15648 1581 aaPredicted RBP11.19□□□□□ -0.62
NUP93-209ENST00000564278 LRRIQ1Q96JM4 1722 aa11.18□□□□□ -0.62
NUP93-209ENST00000564278 ZNF335Q9H4Z2 1342 aaPredicted RBP11.17□□□□□ -0.62
NUP93-209ENST00000564278 ABCC1P33527 1531 aa11.17□□□□□ -0.62
NUP93-209ENST00000564278 ITSN2Q9NZM3 1697 aa11.17□□□□□ -0.62
NUP93-209ENST00000564278 MYO3AQ8NEV4 1616 aa11.17□□□□□ -0.62
NUP93-209ENST00000564278 AGLP35573 1532 aa11.16□□□□□ -0.62
NUP93-209ENST00000564278 CDC42BPBQ9Y5S2 1711 aa11.16□□□□□ -0.62
NUP93-209ENST00000564278 FOXD1Q16676 465 aa11.16□□□□□ -0.62
NUP93-209ENST00000564278 AFAP1Q8N556 730 aa11.16□□□□□ -0.62
NUP93-209ENST00000564278 ZNF142P52746 1687 aaPredicted RBP11.15□□□□□ -0.62
NUP93-209ENST00000564278 CSRNP3Q8WYN3 585 aa11.15□□□□□ -0.62
NUP93-209ENST00000564278 TRAPPC8Q9Y2L5 1435 aa11.15□□□□□ -0.62
NUP93-209ENST00000564278 KIDINS220Q9ULH0 1771 aa11.15□□□□□ -0.62
NUP93-209ENST00000564278 PREX2Q70Z35 1606 aa11.14□□□□□ -0.63
NUP93-209ENST00000564278 MLH3Q9UHC1 1453 aa11.13□□□□□ -0.63
NUP93-209ENST00000564278 MROH2AA6NES4 1674 aa11.13□□□□□ -0.63
NUP93-209ENST00000564278 UBAP1LF5GYI3 381 aa11.12□□□□□ -0.63
NUP93-209ENST00000564278 EFCAB2Q5VUJ9 269 aa11.12□□□□□ -0.63
NUP93-209ENST00000564278 CEP170BQ9Y4F5 1589 aaPredicted RBP11.11□□□□□ -0.63
NUP93-209ENST00000564278 NCKAP5LQ9HCH0 1330 aa11.11□□□□□ -0.63
NUP93-209ENST00000564278 TROQ12816 1431 aaPredicted RBP11.11□□□□□ -0.63
NUP93-209ENST00000564278 TCOF1Q13428 1488 aaKnown RBP11.11□□□□□ -0.63
NUP93-209ENST00000564278 CLTCQ00610 1675 aaKnown RBP11.11□□□□□ -0.63
NUP93-209ENST00000564278 SUPT6HQ7KZ85 1726 aaKnown RBP11.1□□□□□ -0.63
NUP93-209ENST00000564278 NPATQ14207 1427 aa11.09□□□□□ -0.63
NUP93-209ENST00000564278 CNTLNQ9NXG0 1405 aa11.09□□□□□ -0.63
NUP93-209ENST00000564278 PLA2R1Q13018 1463 aa11.09□□□□□ -0.63
NUP93-209ENST00000564278 ARHGAP35Q9NRY4 1499 aa11.09□□□□□ -0.63
NUP93-209ENST00000564278 MYT1LQ9UL68 1186 aa11.09□□□□□ -0.63
NUP93-209ENST00000564278 SAMD9LQ8IVG5 1584 aa11.08□□□□□ -0.64
NUP93-209ENST00000564278 ALKQ9UM73 1620 aa11.08□□□□□ -0.64
NUP93-209ENST00000564278 PLXNC1O60486 1568 aa11.07□□□□□ -0.64
NUP93-209ENST00000564278 CDC42BPAQ5VT25 1732 aa11.07□□□□□ -0.64
NUP93-209ENST00000564278 HSPA1LP34931 641 aa11.07□□□□□ -0.64
NUP93-209ENST00000564278 ATP1B4Q9UN42 357 aaPredicted RBP11.07□□□□□ -0.64
NUP93-209ENST00000564278 SYCP2Q9BX26 1530 aa11.07□□□□□ -0.64
NUP93-209ENST00000564278 NEURL4Q96JN8 1562 aa11.07□□□□□ -0.64
NUP93-209ENST00000564278 CLIP1P30622 1438 aa11.06□□□□□ -0.64
NUP93-209ENST00000564278 EEA1Q15075 1411 aa11.06□□□□□ -0.64
NUP93-209ENST00000564278 FMN1Q68DA7 1419 aa11.06□□□□□ -0.64
NUP93-209ENST00000564278 PTPRKQ15262 1439 aa11.05□□□□□ -0.64
NUP93-209ENST00000564278 ESF1Q9H501 851 aaKnown RBP11.05□□□□□ -0.64
NUP93-209ENST00000564278 INO80Q9ULG1 1556 aaPredicted RBP11.05□□□□□ -0.64
NUP93-209ENST00000564278 SCAF1Q9H7N4 1312 aaKnown RBP11.05□□□□□ -0.64
NUP93-209ENST00000564278 POLR1AO95602 1720 aaPredicted RBP11.04□□□□□ -0.64
NUP93-209ENST00000564278 EHMT2Q96KQ7 1210 aa11.04□□□□□ -0.64
NUP93-209ENST00000564278 ZMYM3Q14202 1370 aa11.03□□□□□ -0.64
NUP93-209ENST00000564278 PIP4K2BP78356 416 aa11.03□□□□□ -0.64
NUP93-209ENST00000564278 ATP7AQ04656 1500 aa11.03□□□□□ -0.64
NUP93-209ENST00000564278 DNMT1P26358 1616 aaKnown RBP11.02□□□□□ -0.64
NUP93-209ENST00000564278 PPP6R1Q9UPN7 881 aa11.01□□□□□ -0.65
NUP93-209ENST00000564278 VWDEQ8N2E2 1590 aa11□□□□□ -0.65
NUP93-209ENST00000564278 A2ML1A8K2U0 1454 aa11□□□□□ -0.65
NUP93-209ENST00000564278 CPS1P31327 1500 aa10.99□□□□□ -0.65
NUP93-209ENST00000564278 PKD2Q13563 968 aa10.98□□□□□ -0.65
NUP93-209ENST00000564278 CDK11AQ9UQ88 783 aaPredicted RBP10.98□□□□□ -0.65
NUP93-209ENST00000564278 A2MP01023 1474 aa10.98□□□□□ -0.65
NUP93-209ENST00000564278 SHANK2Q9UPX8 1470 aa10.98□□□□□ -0.65
NUP93-209ENST00000564278 STRCP1A6NGW2 1772 aa10.97□□□□□ -0.65
NUP93-209ENST00000564278 CCDC18Q5T9S5 1454 aa10.95□□□□□ -0.66
NUP93-209ENST00000564278 SPAG9O60271 1321 aaKnown RBP10.95□□□□□ -0.66
NUP93-209ENST00000564278 RNF17Q9BXT8 1623 aaKnown RBP10.95□□□□□ -0.66
NUP93-209ENST00000564278 GPATCH8Q9UKJ3 1502 aaKnown RBP10.94□□□□□ -0.66
NUP93-209ENST00000564278 ZNF777Q9ULD5 760 aaPredicted RBP10.94□□□□□ -0.66
NUP93-209ENST00000564278 ADGBQ8N7X0 1667 aa10.94□□□□□ -0.66
NUP93-209ENST00000564278 CASKIN1Q8WXD9 1431 aa10.93□□□□□ -0.66
NUP93-209ENST00000564278 SETD1AO15047 1707 aaKnown RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms