RNA–Protein interactions for RNA: ENST00000563941.5

MSLN-205, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,109 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-205ENST00000563941 ANP32CO43423 234 aa28.24■■■□□ 2.11
MSLN-205ENST00000563941 CCER2I3L3R5 266 aa28.23■■■□□ 2.11
MSLN-205ENST00000563941 TROQ12816 1431 aaPredicted RBP28.22■■■□□ 2.11
MSLN-205ENST00000563941 ZNF644Q9H582 1327 aaPredicted RBP28.22■■■□□ 2.11
MSLN-205ENST00000563941 PLB1Q6P1J6 1458 aa28.2■■■□□ 2.1
MSLN-205ENST00000563941 PRG4Q92954 1404 aaPredicted RBP28.19■■■□□ 2.1
MSLN-205ENST00000563941 ITSN2Q9NZM3 1697 aa28.18■■■□□ 2.1
MSLN-205ENST00000563941 NUP160Q12769 1436 aa28.16■■■□□ 2.1
MSLN-205ENST00000563941 ADCY10Q96PN6 1610 aa28.16■■■□□ 2.1
MSLN-205ENST00000563941 CARMIL2Q6F5E8 1435 aa28.15■■■□□ 2.1
MSLN-205ENST00000563941 FBLN2P98095 1184 aa28.15■■■□□ 2.1
MSLN-205ENST00000563941 CAMSAP2Q08AD1 1489 aa28.14■■■□□ 2.1
MSLN-205ENST00000563941 FOXD1Q16676 465 aa28.13■■■□□ 2.09
MSLN-205ENST00000563941 KIF14Q15058 1648 aa28.12■■■□□ 2.09
MSLN-205ENST00000563941 ANKRD30BQ9BXX2 1392 aa28.1■■■□□ 2.09
MSLN-205ENST00000563941 HSPA5P11021 654 aaKnown RBP28.1■■■□□ 2.09
MSLN-205ENST00000563941 ADGBQ8N7X0 1667 aa28.1■■■□□ 2.09
MSLN-205ENST00000563941 GPATCH8Q9UKJ3 1502 aaKnown RBP28.1■■■□□ 2.09
MSLN-205ENST00000563941 JPH4Q96JJ6 628 aa28.09■■■□□ 2.09
MSLN-205ENST00000563941 L3MBTL2Q969R5 705 aa28.09■■■□□ 2.09
MSLN-205ENST00000563941 CFDP1Q9UEE9 299 aaPredicted RBP28.09■■■□□ 2.09
MSLN-205ENST00000563941 RPRD2Q5VT52 1461 aaKnown RBP28.08■■■□□ 2.09
MSLN-205ENST00000563941 CROCC2H7BZ55 1655 aa28.06■■■□□ 2.08
MSLN-205ENST00000563941 EIF4G2P78344 907 aaKnown RBP eCLIP28.04■■■□□ 2.08
MSLN-205ENST00000563941 WASHC2AQ641Q2 1341 aa28.03■■■□□ 2.08
MSLN-205ENST00000563941 TEX14Q8IWB6 1497 aa28.03■■■□□ 2.08
MSLN-205ENST00000563941 SLC4A1APQ9BWU0 796 aaKnown RBP28.03■■■□□ 2.08
MSLN-205ENST00000563941 ABCA8O94911 1581 aa28.02■■■□□ 2.08
MSLN-205ENST00000563941 NCOA1Q15788 1441 aa28.01■■■□□ 2.07
MSLN-205ENST00000563941 ADGRL2O95490 1459 aa28■■■□□ 2.07
MSLN-205ENST00000563941 PZPP20742 1482 aa27.99■■■□□ 2.07
MSLN-205ENST00000563941 ZNF777Q9ULD5 760 aaPredicted RBP27.98■■■□□ 2.07
MSLN-205ENST00000563941 CDC42BPAQ5VT25 1732 aa27.96■■■□□ 2.07
MSLN-205ENST00000563941 NBPF8Q3BBV2 869 aa27.92■■■□□ 2.06
MSLN-205ENST00000563941 ATP10BO94823 1461 aa27.92■■■□□ 2.06
MSLN-205ENST00000563941 ANKRD30AQ9BXX3 1397 aa27.91■■■□□ 2.06
MSLN-205ENST00000563941 PLEKHD1A6NEE1 506 aa27.91■■■□□ 2.06
MSLN-205ENST00000563941 ABCC10Q5T3U5 1492 aa27.91■■■□□ 2.06
MSLN-205ENST00000563941 CNTLNQ9NXG0 1405 aa27.9■■■□□ 2.06
MSLN-205ENST00000563941 KIAA1107Q9UPP5 1409 aa27.87■■■□□ 2.05
MSLN-205ENST00000563941 CCDC7Q96M83 1385 aa27.86■■■□□ 2.05
MSLN-205ENST00000563941 SHANK2Q9UPX8 1470 aa27.85■■■□□ 2.05
MSLN-205ENST00000563941 FKBP8Q14318 412 aa27.84■■■□□ 2.05
MSLN-205ENST00000563941 ANKRD50Q9ULJ7 1429 aa27.84■■■□□ 2.05
MSLN-205ENST00000563941 C11orf95C9JLR9 678 aaPredicted RBP27.83■■■□□ 2.05
MSLN-205ENST00000563941 POLR1AO95602 1720 aaPredicted RBP27.82■■■□□ 2.04
MSLN-205ENST00000563941 SPATA31E1Q6ZUB1 1445 aa27.81■■■□□ 2.04
MSLN-205ENST00000563941 C9orf84Q5VXU9 1444 aa27.8■■■□□ 2.04
MSLN-205ENST00000563941 MBD5Q9P267 1494 aa27.8■■■□□ 2.04
MSLN-205ENST00000563941 PKD2Q13563 968 aa27.77■■■□□ 2.04
MSLN-205ENST00000563941 NEFLP07196 543 aa27.77■■■□□ 2.04
MSLN-205ENST00000563941 BCANQ96GW7 911 aa27.77■■■□□ 2.04
MSLN-205ENST00000563941 PTPRGP23470 1445 aa27.75■■■□□ 2.03
MSLN-205ENST00000563941 ARHGEF5Q12774 1597 aa27.73■■■□□ 2.03
MSLN-205ENST00000563941 HNRNPUQ00839 825 aaKnown RBP eCLIP27.73■■■□□ 2.03
MSLN-205ENST00000563941 CHD1O14646 1710 aa27.72■■■□□ 2.03
MSLN-205ENST00000563941 KIF7Q2M1P5 1343 aa27.72■■■□□ 2.03
MSLN-205ENST00000563941 KDM5DQ9BY66 1539 aa27.71■■■□□ 2.03
MSLN-205ENST00000563941 TSPY4P0CV99 314 aa27.7■■■□□ 2.02
MSLN-205ENST00000563941 TSPY10P0CW01 314 aa27.7■■■□□ 2.02
MSLN-205ENST00000563941 NUP155O75694 1391 aa27.7■■■□□ 2.02
MSLN-205ENST00000563941 PRKRIP1Q9H875 184 aaPredicted RBP27.68■■■□□ 2.02
MSLN-205ENST00000563941 TSHZ2Q9NRE2 1034 aa27.68■■■□□ 2.02
MSLN-205ENST00000563941 PREX2Q70Z35 1606 aa27.68■■■□□ 2.02
MSLN-205ENST00000563941 CDC42BPBQ9Y5S2 1711 aa27.67■■■□□ 2.02
MSLN-205ENST00000563941 SAMD9LQ8IVG5 1584 aa27.66■■■□□ 2.02
MSLN-205ENST00000563941 HNRNPMP52272 730 aaKnown RBP eCLIP27.66■■■□□ 2.02
MSLN-205ENST00000563941 KIF15Q9NS87 1388 aa27.66■■■□□ 2.02
MSLN-205ENST00000563941 CCDC184Q52MB2 194 aa27.64■■■□□ 2.02
MSLN-205ENST00000563941 ZNF326Q5BKZ1 582 aaKnown RBP27.62■■■□□ 2.01
MSLN-205ENST00000563941 USP47Q96K76 1375 aa27.62■■■□□ 2.01
MSLN-205ENST00000563941 CCDC141Q6ZP82 1450 aa27.62■■■□□ 2.01
MSLN-205ENST00000563941 SHROOM2Q13796 1616 aa27.61■■■□□ 2.01
MSLN-205ENST00000563941 KDM5CP41229 1560 aa27.61■■■□□ 2.01
MSLN-205ENST00000563941 BCORL1Q5H9F3 1711 aa27.6■■■□□ 2.01
MSLN-205ENST00000563941 UHRF1BP1Q6BDS2 1440 aa27.6■■■□□ 2.01
MSLN-205ENST00000563941 ARHGEF12Q9NZN5 1544 aa27.59■■■□□ 2.01
MSLN-205ENST00000563941 RALGAPBQ86X10 1494 aa27.57■■■□□ 2
MSLN-205ENST00000563941 MRS2Q9HD23 443 aa27.55■■■□□ 2
MSLN-205ENST00000563941 TTC37Q6PGP7 1564 aa27.54■■■□□ 2
MSLN-205ENST00000563941 RSPH4AQ5TD94 716 aa27.53■■■□□ 2
MSLN-205ENST00000563941 SYCP2Q9BX26 1530 aa27.51■■■□□ 2
MSLN-205ENST00000563941 FAM135AQ9P2D6 1515 aa27.5■■□□□ 1.99
MSLN-205ENST00000563941 FAM9BQ8IZU0 186 aa27.5■■□□□ 1.99
MSLN-205ENST00000563941 ARHGAP5Q13017 1502 aa27.5■■□□□ 1.99
MSLN-205ENST00000563941 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.5■■□□□ 1.99
MSLN-205ENST00000563941 MAST1Q9Y2H9 1570 aa27.49■■□□□ 1.99
MSLN-205ENST00000563941 DHX29Q7Z478 1369 aaKnown RBP27.49■■□□□ 1.99
MSLN-205ENST00000563941 ARID4BQ4LE39 1312 aaPredicted RBP27.49■■□□□ 1.99
MSLN-205ENST00000563941 ABCC2Q92887 1545 aa27.48■■□□□ 1.99
MSLN-205ENST00000563941 ERCC6L2Q5T890 1561 aa27.47■■□□□ 1.99
MSLN-205ENST00000563941 MYO5CQ9NQX4 1742 aa27.46■■□□□ 1.99
MSLN-205ENST00000563941 CARD11Q9BXL7 1154 aa27.44■■□□□ 1.98
MSLN-205ENST00000563941 UNC13BO14795 1591 aa27.43■■□□□ 1.98
MSLN-205ENST00000563941 POLR3GLQ9BT43 218 aa27.43■■□□□ 1.98
MSLN-205ENST00000563941 ZBED9Q6R2W3 1325 aa27.42■■□□□ 1.98
MSLN-205ENST00000563941 KDM2AQ9Y2K7 1162 aa27.41■■□□□ 1.98
MSLN-205ENST00000563941 DCAF11Q8TEB1 546 aa27.4■■□□□ 1.98
MSLN-205ENST00000563941 PLXNC1O60486 1568 aa27.4■■□□□ 1.98
MSLN-205ENST00000563941 ROCK2O75116 1388 aaKnown RBP27.39■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms