RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 SUPT6HQ7KZ85 1726 aaKnown RBP15.96■□□□□ 0.15
ABCA3-203ENST00000563623 RTL5Q5HYW3 569 aaPredicted RBP15.95■□□□□ 0.14
ABCA3-203ENST00000563623 EHBP1L1Q8N3D4 1523 aa15.94■□□□□ 0.14
ABCA3-203ENST00000563623 AKNAQ7Z591 1439 aa15.93■□□□□ 0.14
ABCA3-203ENST00000563623 CUL7Q14999 1698 aa15.92■□□□□ 0.14
ABCA3-203ENST00000563623 CTTNBP2Q8WZ74 1663 aa15.92■□□□□ 0.14
ABCA3-203ENST00000563623 GRIN2BQ13224 1484 aa15.92■□□□□ 0.14
ABCA3-203ENST00000563623 CFDP1Q9UEE9 299 aaPredicted RBP15.91■□□□□ 0.14
ABCA3-203ENST00000563623 PAK3O75914 559 aaPredicted RBP15.91■□□□□ 0.14
ABCA3-203ENST00000563623 FBLN2P98095 1184 aa15.91■□□□□ 0.14
ABCA3-203ENST00000563623 NUDCQ9Y266 331 aa15.91■□□□□ 0.14
ABCA3-203ENST00000563623 ZBTB47Q9UFB7 747 aaPredicted RBP15.91■□□□□ 0.14
ABCA3-203ENST00000563623 CDK13Q14004 1512 aaKnown RBP15.9■□□□□ 0.14
ABCA3-203ENST00000563623 PKD2Q13563 968 aa15.9■□□□□ 0.14
ABCA3-203ENST00000563623 NCOA1Q15788 1441 aa15.9■□□□□ 0.14
ABCA3-203ENST00000563623 CARD11Q9BXL7 1154 aa15.88■□□□□ 0.13
ABCA3-203ENST00000563623 DNAJC5BQ9UF47 199 aa15.87■□□□□ 0.13
ABCA3-203ENST00000563623 URB2Q14146 1524 aaKnown RBP15.87■□□□□ 0.13
ABCA3-203ENST00000563623 UGGT2Q9NYU1 1516 aa15.87■□□□□ 0.13
ABCA3-203ENST00000563623 KDM5BQ9UGL1 1544 aa15.87■□□□□ 0.13
ABCA3-203ENST00000563623 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.87■□□□□ 0.13
ABCA3-203ENST00000563623 KDM6BO15054 1643 aa15.87■□□□□ 0.13
ABCA3-203ENST00000563623 MAGI3Q5TCQ9 1506 aa15.86■□□□□ 0.13
ABCA3-203ENST00000563623 ANKRD30BQ9BXX2 1392 aa15.86■□□□□ 0.13
ABCA3-203ENST00000563623 MYT1LQ9UL68 1186 aa15.85■□□□□ 0.13
ABCA3-203ENST00000563623 EIF5BO60841 1220 aaKnown RBP15.85■□□□□ 0.13
ABCA3-203ENST00000563623 RTN4Q9NQC3 1192 aaKnown RBP15.85■□□□□ 0.13
ABCA3-203ENST00000563623 USP47Q96K76 1375 aa15.84■□□□□ 0.13
ABCA3-203ENST00000563623 EPRSP07814 1512 aaKnown RBP15.84■□□□□ 0.13
ABCA3-203ENST00000563623 DENND4BO75064 1496 aaPredicted RBP15.82■□□□□ 0.12
ABCA3-203ENST00000563623 PDS5BQ9NTI5 1447 aa15.81■□□□□ 0.12
ABCA3-203ENST00000563623 DCAF11Q8TEB1 546 aa15.8■□□□□ 0.12
ABCA3-203ENST00000563623 DAPK1P53355 1430 aa15.8■□□□□ 0.12
ABCA3-203ENST00000563623 RGL3Q3MIN7 710 aa15.8■□□□□ 0.12
ABCA3-203ENST00000563623 IPO9Q96P70 1041 aaKnown RBP15.8■□□□□ 0.12
ABCA3-203ENST00000563623 MIA2Q96PC5 1412 aa15.79■□□□□ 0.12
ABCA3-203ENST00000563623 RPRD2Q5VT52 1461 aaKnown RBP15.79■□□□□ 0.12
ABCA3-203ENST00000563623 LAS1LQ9Y4W2 734 aaKnown RBP15.79■□□□□ 0.12
ABCA3-203ENST00000563623 ST20-MTHFSA0A0A6YYL1 179 aa15.79■□□□□ 0.12
ABCA3-203ENST00000563623 LRRIQ1Q96JM4 1722 aa15.79■□□□□ 0.12
ABCA3-203ENST00000563623 SAMD9Q5K651 1589 aa15.79■□□□□ 0.12
ABCA3-203ENST00000563623 EXOC6Q8TAG9 804 aa15.78■□□□□ 0.12
ABCA3-203ENST00000563623 HECW1Q76N89 1606 aa15.77■□□□□ 0.12
ABCA3-203ENST00000563623 THOC2Q8NI27 1593 aaKnown RBP15.77■□□□□ 0.12
ABCA3-203ENST00000563623 ABCC5O15440 1437 aa15.77■□□□□ 0.12
ABCA3-203ENST00000563623 SMG6Q86US8 1419 aaKnown RBP15.77■□□□□ 0.12
ABCA3-203ENST00000563623 PNISRQ8TF01 805 aaKnown RBP15.76■□□□□ 0.11
ABCA3-203ENST00000563623 TCOF1Q13428 1488 aaKnown RBP15.76■□□□□ 0.11
ABCA3-203ENST00000563623 NUP155O75694 1391 aa15.75■□□□□ 0.11
ABCA3-203ENST00000563623 TSPY4P0CV99 314 aa15.75■□□□□ 0.11
ABCA3-203ENST00000563623 TSPY10P0CW01 314 aa15.75■□□□□ 0.11
ABCA3-203ENST00000563623 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.75■□□□□ 0.11
ABCA3-203ENST00000563623 CC2D1BQ5T0F9 858 aaKnown RBP15.74■□□□□ 0.11
ABCA3-203ENST00000563623 RCAN3Q9UKA8 241 aa15.74■□□□□ 0.11
ABCA3-203ENST00000563623 LAMC3Q9Y6N6 1575 aa15.72■□□□□ 0.11
ABCA3-203ENST00000563623 GCC2Q8IWJ2 1684 aa15.72■□□□□ 0.11
ABCA3-203ENST00000563623 CHMP7Q8WUX9 453 aaPredicted RBP15.72■□□□□ 0.11
ABCA3-203ENST00000563623 PLIN1O60240 522 aa15.71■□□□□ 0.11
ABCA3-203ENST00000563623 TEX14Q8IWB6 1497 aa15.71■□□□□ 0.11
ABCA3-203ENST00000563623 RRP1P56182 461 aaKnown RBP15.71■□□□□ 0.11
ABCA3-203ENST00000563623 PRG4Q92954 1404 aaPredicted RBP15.71■□□□□ 0.1
ABCA3-203ENST00000563623 IQGAP2Q13576 1575 aa15.71■□□□□ 0.1
ABCA3-203ENST00000563623 ROCK1Q13464 1354 aa15.7■□□□□ 0.1
ABCA3-203ENST00000563623 DHX29Q7Z478 1369 aaKnown RBP15.7■□□□□ 0.1
ABCA3-203ENST00000563623 SPATA31E1Q6ZUB1 1445 aa15.69■□□□□ 0.1
ABCA3-203ENST00000563623 PLEKHD1A6NEE1 506 aa15.69■□□□□ 0.1
ABCA3-203ENST00000563623 ANKRD30AQ9BXX3 1397 aa15.69■□□□□ 0.1
ABCA3-203ENST00000563623 DAXXQ9UER7 740 aaPredicted RBP15.69■□□□□ 0.1
ABCA3-203ENST00000563623 ARHGEF11O15085 1522 aa15.69■□□□□ 0.1
ABCA3-203ENST00000563623 KIF15Q9NS87 1388 aa15.69■□□□□ 0.1
ABCA3-203ENST00000563623 MYBBP1AQ9BQG0 1328 aaKnown RBP15.68■□□□□ 0.1
ABCA3-203ENST00000563623 ABCA5Q8WWZ7 1642 aa15.68■□□□□ 0.1
ABCA3-203ENST00000563623 NEFMP07197 916 aa15.68■□□□□ 0.1
ABCA3-203ENST00000563623 CDCA7LQ96GN5 454 aa15.68■□□□□ 0.1
ABCA3-203ENST00000563623 KIAA1107Q9UPP5 1409 aa15.67■□□□□ 0.1
ABCA3-203ENST00000563623 HNRNPMP52272 730 aaKnown RBP eCLIP15.67■□□□□ 0.1
ABCA3-203ENST00000563623 RALBP1Q15311 655 aa15.66■□□□□ 0.1
ABCA3-203ENST00000563623 SKAP1Q86WV1 359 aa15.66■□□□□ 0.1
ABCA3-203ENST00000563623 ROCK2O75116 1388 aaKnown RBP15.66■□□□□ 0.1
ABCA3-203ENST00000563623 PDE4AP27815 886 aa15.66■□□□□ 0.1
ABCA3-203ENST00000563623 TCERG1O14776 1098 aaKnown RBP15.64■□□□□ 0.09
ABCA3-203ENST00000563623 ANKRD50Q9ULJ7 1429 aa15.63■□□□□ 0.09
ABCA3-203ENST00000563623 NLRP13Q86W25 1043 aa15.63■□□□□ 0.09
ABCA3-203ENST00000563623 KTN1Q86UP2 1357 aaKnown RBP15.63■□□□□ 0.09
ABCA3-203ENST00000563623 WDR62O43379 1518 aa15.62■□□□□ 0.09
ABCA3-203ENST00000563623 PZPP20742 1482 aa15.62■□□□□ 0.09
ABCA3-203ENST00000563623 CAMSAP2Q08AD1 1489 aa15.6■□□□□ 0.09
ABCA3-203ENST00000563623 ARID4BQ4LE39 1312 aaPredicted RBP15.6■□□□□ 0.09
ABCA3-203ENST00000563623 RNF123Q5XPI4 1314 aa15.6■□□□□ 0.09
ABCA3-203ENST00000563623 NBPF1Q3BBV0 1214 aa15.6■□□□□ 0.09
ABCA3-203ENST00000563623 UBE2Q2Q8WVN8 375 aa15.6■□□□□ 0.09
ABCA3-203ENST00000563623 BRD4O60885 1362 aaPredicted RBP15.59■□□□□ 0.09
ABCA3-203ENST00000563623 CRBNQ96SW2 442 aa15.59■□□□□ 0.09
ABCA3-203ENST00000563623 NUP153P49790 1475 aaKnown RBP15.58■□□□□ 0.09
ABCA3-203ENST00000563623 TROQ12816 1431 aaPredicted RBP15.58■□□□□ 0.08
ABCA3-203ENST00000563623 SLC4A3P48751 1232 aa15.57■□□□□ 0.08
ABCA3-203ENST00000563623 DNMT1P26358 1616 aaKnown RBP15.57■□□□□ 0.08
ABCA3-203ENST00000563623 PANK3Q9H999 370 aa15.56■□□□□ 0.08
ABCA3-203ENST00000563623 PLB1Q6P1J6 1458 aa15.56■□□□□ 0.08
ABCA3-203ENST00000563623 ZNF608Q9ULD9 1512 aaPredicted RBP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms