RNA–Protein interactions for RNA: ENST00000563425.2

CDH5-204, Transcript of cadherin 5, humanhuman

TSL 5 BASIC

Gene CDH5, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-204ENST00000563425 ATP10BO94823 1461 aa28.1■■■□□ 2.09
CDH5-204ENST00000563425 PPP1R15AO75807 674 aaPredicted RBP28.1■■■□□ 2.09
CDH5-204ENST00000563425 ZNF644Q9H582 1327 aaPredicted RBP28.09■■■□□ 2.09
CDH5-204ENST00000563425 CAMSAP2Q08AD1 1489 aa28.09■■■□□ 2.09
CDH5-204ENST00000563425 CDC42BPAQ5VT25 1732 aa28.08■■■□□ 2.09
CDH5-204ENST00000563425 ADGBQ8N7X0 1667 aa28.07■■■□□ 2.08
CDH5-204ENST00000563425 CROCC2H7BZ55 1655 aa28.07■■■□□ 2.08
CDH5-204ENST00000563425 DENND4BO75064 1496 aaPredicted RBP28.07■■■□□ 2.08
CDH5-204ENST00000563425 SCAF1Q9H7N4 1312 aaKnown RBP28.06■■■□□ 2.08
CDH5-204ENST00000563425 TONSLQ96HA7 1378 aa28.06■■■□□ 2.08
CDH5-204ENST00000563425 PTPRGP23470 1445 aa28.04■■■□□ 2.08
CDH5-204ENST00000563425 CFDP1Q9UEE9 299 aaPredicted RBP28.04■■■□□ 2.08
CDH5-204ENST00000563425 ABCC10Q5T3U5 1492 aa28.02■■■□□ 2.08
CDH5-204ENST00000563425 PLEKHD1A6NEE1 506 aa28.02■■■□□ 2.08
CDH5-204ENST00000563425 TRIM52Q96A61 297 aa28■■■□□ 2.07
CDH5-204ENST00000563425 KDM5BQ9UGL1 1544 aa27.96■■■□□ 2.07
CDH5-204ENST00000563425 ADGRL2O95490 1459 aa27.95■■■□□ 2.06
CDH5-204ENST00000563425 MPHOSPH9Q99550 1183 aa27.94■■■□□ 2.06
CDH5-204ENST00000563425 NCOA1Q15788 1441 aa27.91■■■□□ 2.06
CDH5-204ENST00000563425 YTHDC1Q96MU7 727 aaKnown RBP27.9■■■□□ 2.06
CDH5-204ENST00000563425 ZNF777Q9ULD5 760 aaPredicted RBP27.88■■■□□ 2.05
CDH5-204ENST00000563425 ERCC6L2Q5T890 1561 aa27.87■■■□□ 2.05
CDH5-204ENST00000563425 SHANK2Q9UPX8 1470 aa27.85■■■□□ 2.05
CDH5-204ENST00000563425 CLASP1Q7Z460 1538 aa27.85■■■□□ 2.05
CDH5-204ENST00000563425 CDC42BPBQ9Y5S2 1711 aa27.85■■■□□ 2.05
CDH5-204ENST00000563425 PREX2Q70Z35 1606 aa27.83■■■□□ 2.05
CDH5-204ENST00000563425 ANKRD30AQ9BXX3 1397 aa27.82■■■□□ 2.04
CDH5-204ENST00000563425 ABCC2Q92887 1545 aa27.82■■■□□ 2.04
CDH5-204ENST00000563425 ARHGEF5Q12774 1597 aa27.81■■■□□ 2.04
CDH5-204ENST00000563425 ANKRD30BQ9BXX2 1392 aa27.8■■■□□ 2.04
CDH5-204ENST00000563425 PZPP20742 1482 aa27.78■■■□□ 2.04
CDH5-204ENST00000563425 RPRD2Q5VT52 1461 aaKnown RBP27.76■■■□□ 2.03
CDH5-204ENST00000563425 SAMD9LQ8IVG5 1584 aa27.75■■■□□ 2.03
CDH5-204ENST00000563425 C9orf84Q5VXU9 1444 aa27.75■■■□□ 2.03
CDH5-204ENST00000563425 FOXD1Q16676 465 aa27.75■■■□□ 2.03
CDH5-204ENST00000563425 SLC4A1APQ9BWU0 796 aaKnown RBP27.74■■■□□ 2.03
CDH5-204ENST00000563425 DDX10Q13206 875 aaKnown RBP27.72■■■□□ 2.03
CDH5-204ENST00000563425 TTC37Q6PGP7 1564 aa27.72■■■□□ 2.03
CDH5-204ENST00000563425 HIRIP3Q9BW71 556 aaPredicted RBP27.71■■■□□ 2.03
CDH5-204ENST00000563425 ANKRD50Q9ULJ7 1429 aa27.71■■■□□ 2.03
CDH5-204ENST00000563425 MBD5Q9P267 1494 aa27.71■■■□□ 2.03
CDH5-204ENST00000563425 GTF3C3Q9Y5Q9 886 aa27.71■■■□□ 2.03
CDH5-204ENST00000563425 MYO5CQ9NQX4 1742 aa27.69■■■□□ 2.02
CDH5-204ENST00000563425 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.69■■■□□ 2.02
CDH5-204ENST00000563425 TEX14Q8IWB6 1497 aa27.68■■■□□ 2.02
CDH5-204ENST00000563425 L3MBTL2Q969R5 705 aa27.67■■■□□ 2.02
CDH5-204ENST00000563425 ZCCHC11Q5TAX3 1644 aaKnown RBP27.66■■■□□ 2.02
CDH5-204ENST00000563425 UHRF1BP1LA0JNW5 1464 aa27.66■■■□□ 2.02
CDH5-204ENST00000563425 CCDC141Q6ZP82 1450 aa27.65■■■□□ 2.02
CDH5-204ENST00000563425 TSPY4P0CV99 314 aa27.65■■■□□ 2.02
CDH5-204ENST00000563425 TSPY10P0CW01 314 aa27.65■■■□□ 2.02
CDH5-204ENST00000563425 KIAA1107Q9UPP5 1409 aa27.64■■■□□ 2.02
CDH5-204ENST00000563425 HNRNPMP52272 730 aaKnown RBP eCLIP27.64■■■□□ 2.02
CDH5-204ENST00000563425 KDM5DQ9BY66 1539 aa27.63■■■□□ 2.01
CDH5-204ENST00000563425 ARHGAP5Q13017 1502 aa27.61■■■□□ 2.01
CDH5-204ENST00000563425 RSPH4AQ5TD94 716 aa27.6■■■□□ 2.01
CDH5-204ENST00000563425 MAST1Q9Y2H9 1570 aa27.59■■■□□ 2.01
CDH5-204ENST00000563425 SYCP2Q9BX26 1530 aa27.58■■■□□ 2.01
CDH5-204ENST00000563425 KIF15Q9NS87 1388 aa27.58■■■□□ 2.01
CDH5-204ENST00000563425 PKD2Q13563 968 aa27.53■■■□□ 2
CDH5-204ENST00000563425 PLEKHH2Q8IVE3 1493 aa27.53■■■□□ 2
CDH5-204ENST00000563425 NUP155O75694 1391 aa27.53■■■□□ 2
CDH5-204ENST00000563425 HSPA5P11021 654 aaKnown RBP27.53■■■□□ 2
CDH5-204ENST00000563425 EIF4G2P78344 907 aaKnown RBP eCLIP27.5■■□□□ 1.99
CDH5-204ENST00000563425 PLXNC1O60486 1568 aa27.5■■□□□ 1.99
CDH5-204ENST00000563425 NBPF8Q3BBV2 869 aa27.49■■□□□ 1.99
CDH5-204ENST00000563425 PLCH2O75038 1416 aa27.47■■□□□ 1.99
CDH5-204ENST00000563425 KCNH8Q96L42 1107 aa27.46■■□□□ 1.99
CDH5-204ENST00000563425 POLR1AO95602 1720 aaPredicted RBP27.45■■□□□ 1.98
CDH5-204ENST00000563425 UNC13BO14795 1591 aa27.44■■□□□ 1.98
CDH5-204ENST00000563425 ANP32CO43423 234 aa27.44■■□□□ 1.98
CDH5-204ENST00000563425 CCER2I3L3R5 266 aa27.42■■□□□ 1.98
CDH5-204ENST00000563425 ARHGEF12Q9NZN5 1544 aa27.42■■□□□ 1.98
CDH5-204ENST00000563425 WASHC2AQ641Q2 1341 aa27.41■■□□□ 1.98
CDH5-204ENST00000563425 FAM135AQ9P2D6 1515 aa27.41■■□□□ 1.98
CDH5-204ENST00000563425 ABCC1P33527 1531 aa27.39■■□□□ 1.98
CDH5-204ENST00000563425 ARAP3Q8WWN8 1544 aa27.38■■□□□ 1.97
CDH5-204ENST00000563425 SPATA31E1Q6ZUB1 1445 aa27.38■■□□□ 1.97
CDH5-204ENST00000563425 EFCAB2Q5VUJ9 269 aa27.35■■□□□ 1.97
CDH5-204ENST00000563425 DUOX2Q9NRD8 1548 aa27.35■■□□□ 1.97
CDH5-204ENST00000563425 IQGAP3Q86VI3 1631 aa27.34■■□□□ 1.97
CDH5-204ENST00000563425 UHRF1BP1Q6BDS2 1440 aa27.32■■□□□ 1.96
CDH5-204ENST00000563425 WDR7Q9Y4E6 1490 aa27.31■■□□□ 1.96
CDH5-204ENST00000563425 CCDC7Q96M83 1385 aa27.3■■□□□ 1.96
CDH5-204ENST00000563425 CNTLNQ9NXG0 1405 aa27.28■■□□□ 1.96
CDH5-204ENST00000563425 ERBINQ96RT1 1412 aa27.28■■□□□ 1.96
CDH5-204ENST00000563425 MAGI2Q86UL8 1455 aa27.28■■□□□ 1.96
CDH5-204ENST00000563425 C11orf95C9JLR9 678 aaPredicted RBP27.27■■□□□ 1.96
CDH5-204ENST00000563425 ABCA9Q8IUA7 1624 aa27.27■■□□□ 1.96
CDH5-204ENST00000563425 TRAPPC8Q9Y2L5 1435 aa27.25■■□□□ 1.95
CDH5-204ENST00000563425 KDM5CP41229 1560 aa27.25■■□□□ 1.95
CDH5-204ENST00000563425 RALGAPBQ86X10 1494 aa27.24■■□□□ 1.95
CDH5-204ENST00000563425 BCORL1Q5H9F3 1711 aa27.19■■□□□ 1.94
CDH5-204ENST00000563425 RTEL1-TNFRSF6BF6WH68 1400 aa27.19■■□□□ 1.94
CDH5-204ENST00000563425 USP47Q96K76 1375 aa27.19■■□□□ 1.94
CDH5-204ENST00000563425 ZFYVE16Q7Z3T8 1539 aa27.18■■□□□ 1.94
CDH5-204ENST00000563425 ZNF326Q5BKZ1 582 aaKnown RBP27.18■■□□□ 1.94
CDH5-204ENST00000563425 KIF7Q2M1P5 1343 aa27.18■■□□□ 1.94
CDH5-204ENST00000563425 PLA2R1Q13018 1463 aa27.17■■□□□ 1.94
CDH5-204ENST00000563425 CCDC144AA2RUR9 1427 aa27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms