RNA–Protein interactions for RNA: ENST00000562220.2

PCDHA10-203, Transcript of protocadherin alpha 10, humanhuman

BASIC

Gene PCDHA10, Length 12,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA10-203ENST00000562220 GPATCH3Q96I76 525 aa12.59□□□□□ -0.39
PCDHA10-203ENST00000562220 SENP3-EIF4A1A0A087X0R7 540 aa12.58□□□□□ -0.4
PCDHA10-203ENST00000562220 GOLGA6L1Q8N7Z2 621 aa12.58□□□□□ -0.4
PCDHA10-203ENST00000562220 CCNB3Q8WWL7 1395 aa12.58□□□□□ -0.4
PCDHA10-203ENST00000562220 CC2D1BQ5T0F9 858 aaKnown RBP12.58□□□□□ -0.4
PCDHA10-203ENST00000562220 WRNQ14191 1432 aaPredicted RBP eCLIP12.58□□□□□ -0.4
PCDHA10-203ENST00000562220 BAZ1BQ9UIG0 1483 aaKnown RBP12.57□□□□□ -0.4
PCDHA10-203ENST00000562220 KTN1Q86UP2 1357 aaKnown RBP12.56□□□□□ -0.4
PCDHA10-203ENST00000562220 TNNT3P45378 269 aaPredicted RBP12.56□□□□□ -0.4
PCDHA10-203ENST00000562220 CSPP1Q1MSJ5 1256 aa12.56□□□□□ -0.4
PCDHA10-203ENST00000562220 TIMELESSQ9UNS1 1208 aa12.56□□□□□ -0.4
PCDHA10-203ENST00000562220 PHF14O94880 888 aa12.56□□□□□ -0.4
PCDHA10-203ENST00000562220 LMOD2Q6P5Q4 547 aa12.55□□□□□ -0.4
PCDHA10-203ENST00000562220 CHMP4AQ9BY43 222 aa12.55□□□□□ -0.4
PCDHA10-203ENST00000562220 ISY1Q9ULR0 285 aaKnown RBP12.54□□□□□ -0.4
PCDHA10-203ENST00000562220 MYO15BQ96JP2 1530 aa12.54□□□□□ -0.4
PCDHA10-203ENST00000562220 SPRYD3Q8NCJ5 442 aa12.54□□□□□ -0.4
PCDHA10-203ENST00000562220 RTF1Q92541 710 aaKnown RBP12.54□□□□□ -0.4
PCDHA10-203ENST00000562220 TCERG1O14776 1098 aaKnown RBP12.53□□□□□ -0.4
PCDHA10-203ENST00000562220 MORC1Q86VD1 984 aa12.53□□□□□ -0.4
PCDHA10-203ENST00000562220 HDGFP51858 240 aaKnown RBP12.53□□□□□ -0.4
PCDHA10-203ENST00000562220 RWDD1Q9H446 243 aaPredicted RBP12.52□□□□□ -0.4
PCDHA10-203ENST00000562220 NACADO15069 1562 aa12.52□□□□□ -0.41
PCDHA10-203ENST00000562220 ARHGAP35Q9NRY4 1499 aa12.5□□□□□ -0.41
PCDHA10-203ENST00000562220 RALBP1Q15311 655 aa12.5□□□□□ -0.41
PCDHA10-203ENST00000562220 EIF3AQ14152 1382 aaKnown RBP12.5□□□□□ -0.41
PCDHA10-203ENST00000562220 RBM19Q9Y4C8 960 aaKnown RBP12.5□□□□□ -0.41
PCDHA10-203ENST00000562220 RCAN3Q9UKA8 241 aa12.5□□□□□ -0.41
PCDHA10-203ENST00000562220 GOLGA6L3A6NEY3 463 aa12.49□□□□□ -0.41
PCDHA10-203ENST00000562220 HDAC5Q9UQL6 1122 aa12.49□□□□□ -0.41
PCDHA10-203ENST00000562220 NCBP3Q53F19 620 aaKnown RBP12.49□□□□□ -0.41
PCDHA10-203ENST00000562220 EIF4G1Q04637 1599 aaKnown RBP12.49□□□□□ -0.41
PCDHA10-203ENST00000562220 AMER1Q5JTC6 1135 aaPredicted RBP12.48□□□□□ -0.41
PCDHA10-203ENST00000562220 A0A0U1RQG5 324 aaPredicted RBP12.48□□□□□ -0.41
PCDHA10-203ENST00000562220 SRPK2P78362 688 aaKnown RBP12.48□□□□□ -0.41
PCDHA10-203ENST00000562220 SLKQ9H2G2 1235 aaPredicted RBP12.47□□□□□ -0.41
PCDHA10-203ENST00000562220 SETD5Q9C0A6 1442 aa12.47□□□□□ -0.41
PCDHA10-203ENST00000562220 ITPRIPQ8IWB1 547 aa12.47□□□□□ -0.41
PCDHA10-203ENST00000562220 HMMRO75330 724 aa12.46□□□□□ -0.41
PCDHA10-203ENST00000562220 DCAF11Q8TEB1 546 aa12.46□□□□□ -0.42
PCDHA10-203ENST00000562220 SIN3AQ96ST3 1273 aa12.45□□□□□ -0.42
PCDHA10-203ENST00000562220 HDGFL2Q7Z4V5 671 aaPredicted RBP12.45□□□□□ -0.42
PCDHA10-203ENST00000562220 PMFBP1Q8TBY8 1022 aa12.45□□□□□ -0.42
PCDHA10-203ENST00000562220 TPM3P06753 285 aa12.45□□□□□ -0.42
PCDHA10-203ENST00000562220 DDX11L8A8MPP1 907 aa12.45□□□□□ -0.42
PCDHA10-203ENST00000562220 ERCC6Q03468 1493 aa12.44□□□□□ -0.42
PCDHA10-203ENST00000562220 SETQ01105 290 aaPredicted RBP12.43□□□□□ -0.42
PCDHA10-203ENST00000562220 ROCK2O75116 1388 aaKnown RBP12.43□□□□□ -0.42
PCDHA10-203ENST00000562220 PHLDB1Q86UU1 1377 aa12.43□□□□□ -0.42
PCDHA10-203ENST00000562220 STK31Q9BXU1 1019 aa12.43□□□□□ -0.42
PCDHA10-203ENST00000562220 APBB1O00213 710 aa12.43□□□□□ -0.42
PCDHA10-203ENST00000562220 ST18O60284 1047 aa12.43□□□□□ -0.42
PCDHA10-203ENST00000562220 BAZ1AQ9NRL2 1556 aaPredicted RBP12.43□□□□□ -0.42
PCDHA10-203ENST00000562220 SPAG9O60271 1321 aaKnown RBP12.43□□□□□ -0.42
PCDHA10-203ENST00000562220 ARID3AQ99856 593 aa12.42□□□□□ -0.42
PCDHA10-203ENST00000562220 PRM3Q9NNZ6 103 aa12.42□□□□□ -0.42
PCDHA10-203ENST00000562220 KIF16BQ96L93 1317 aa12.42□□□□□ -0.42
PCDHA10-203ENST00000562220 GZF1Q9H116 711 aaPredicted RBP12.42□□□□□ -0.42
PCDHA10-203ENST00000562220 HSP90B1P14625 803 aaKnown RBP12.42□□□□□ -0.42
PCDHA10-203ENST00000562220 IPO9Q96P70 1041 aaKnown RBP12.41□□□□□ -0.42
PCDHA10-203ENST00000562220 RSPH6AQ9H0K4 717 aa12.4□□□□□ -0.42
PCDHA10-203ENST00000562220 RASSF8Q8NHQ8 419 aa12.4□□□□□ -0.42
PCDHA10-203ENST00000562220 TMX4Q9H1E5 349 aaPredicted RBP12.4□□□□□ -0.42
PCDHA10-203ENST00000562220 KIF3AQ9Y496 699 aa12.4□□□□□ -0.42
PCDHA10-203ENST00000562220 U2AF1L5P0DN76 240 aaPredicted RBP12.4□□□□□ -0.42
PCDHA10-203ENST00000562220 U2AF1Q01081 240 aaKnown RBP eCLIP12.4□□□□□ -0.42
PCDHA10-203ENST00000562220 CHMP4CQ96CF2 233 aa12.39□□□□□ -0.43
PCDHA10-203ENST00000562220 TRIM6-TRIM34B2RNG4 842 aa12.39□□□□□ -0.43
PCDHA10-203ENST00000562220 LMOD3Q0VAK6 560 aa12.39□□□□□ -0.43
PCDHA10-203ENST00000562220 HSP90AA2PQ14568 343 aaPredicted RBP12.39□□□□□ -0.43
PCDHA10-203ENST00000562220 PDE3BQ13370 1112 aa12.38□□□□□ -0.43
PCDHA10-203ENST00000562220 CEP89Q96ST8 783 aa12.38□□□□□ -0.43
PCDHA10-203ENST00000562220 GORABQ5T7V8 394 aa12.38□□□□□ -0.43
PCDHA10-203ENST00000562220 MFAP1P55081 439 aaKnown RBP12.38□□□□□ -0.43
PCDHA10-203ENST00000562220 GON4LQ3T8J9 2241 aa12.36□□□□□ -0.43
PCDHA10-203ENST00000562220 VPS8Q8N3P4 1428 aa12.36□□□□□ -0.43
PCDHA10-203ENST00000562220 TPM1P09493 284 aa12.36□□□□□ -0.43
PCDHA10-203ENST00000562220 HSPA5P11021 654 aaKnown RBP12.36□□□□□ -0.43
PCDHA10-203ENST00000562220 TAF7LQ5H9L4 462 aa12.36□□□□□ -0.43
PCDHA10-203ENST00000562220 SOX12O15370 315 aa12.36□□□□□ -0.43
PCDHA10-203ENST00000562220 CCDC70Q6NSX1 233 aa12.36□□□□□ -0.43
PCDHA10-203ENST00000562220 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.36□□□□□ -0.43
PCDHA10-203ENST00000562220 GPS2Q13227 327 aa12.35□□□□□ -0.43
PCDHA10-203ENST00000562220 TSR1Q2NL82 804 aaKnown RBP12.35□□□□□ -0.43
PCDHA10-203ENST00000562220 CENPJQ9HC77 1338 aaPredicted RBP12.34□□□□□ -0.43
PCDHA10-203ENST00000562220 ATP6V1DQ9Y5K8 247 aa12.34□□□□□ -0.43
PCDHA10-203ENST00000562220 SF3A1Q15459 793 aaKnown RBP12.34□□□□□ -0.43
PCDHA10-203ENST00000562220 SMC4Q9NTJ3 1288 aa12.34□□□□□ -0.43
PCDHA10-203ENST00000562220 CHMP3Q9Y3E7 222 aa12.33□□□□□ -0.44
PCDHA10-203ENST00000562220 FMN1Q68DA7 1419 aa12.32□□□□□ -0.44
PCDHA10-203ENST00000562220 SKOR2Q2VWA4 1001 aaPredicted RBP12.32□□□□□ -0.44
PCDHA10-203ENST00000562220 CREBRFQ8IUR6 639 aa12.32□□□□□ -0.44
PCDHA10-203ENST00000562220 NLRP13Q86W25 1043 aa12.32□□□□□ -0.44
PCDHA10-203ENST00000562220 CARMIL1Q5VZK9 1371 aa12.31□□□□□ -0.44
PCDHA10-203ENST00000562220 TPM2P07951 284 aa12.31□□□□□ -0.44
PCDHA10-203ENST00000562220 GOLGA6L19H0YKK7 550 aa12.31□□□□□ -0.44
PCDHA10-203ENST00000562220 H3BQV1 296 aa12.31□□□□□ -0.44
PCDHA10-203ENST00000562220 IFFO2Q5TF58 517 aa12.31□□□□□ -0.44
PCDHA10-203ENST00000562220 TERF2IPQ9NYB0 399 aa12.31□□□□□ -0.44
PCDHA10-203ENST00000562220 ANKRD30AQ9BXX3 1397 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms