RNA–Protein interactions for RNA: ENST00000561412.1

IRF9-214, Transcript of interferon regulatory factor 9, humanhuman

TSL 5

Gene IRF9, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-214ENST00000561412 EFCAB5A4FU69 1503 aa17.1■□□□□ 0.33
IRF9-214ENST00000561412 STRCQ7RTU9 1775 aa17.08■□□□□ 0.33
IRF9-214ENST00000561412 CFAP74Q9C0B2 1584 aa17.08■□□□□ 0.32
IRF9-214ENST00000561412 ARHGEF12Q9NZN5 1544 aa17.08■□□□□ 0.32
IRF9-214ENST00000561412 SCAPERQ9BY12 1400 aa17.08■□□□□ 0.32
IRF9-214ENST00000561412 DISP3Q9P2K9 1392 aa17.07■□□□□ 0.32
IRF9-214ENST00000561412 MAGI2Q86UL8 1455 aa17.05■□□□□ 0.32
IRF9-214ENST00000561412 PREX1Q8TCU6 1659 aa17.04■□□□□ 0.32
IRF9-214ENST00000561412 PLCH2O75038 1416 aa17.03■□□□□ 0.32
IRF9-214ENST00000561412 ATP10AO60312 1499 aa17.02■□□□□ 0.32
IRF9-214ENST00000561412 SOCS7O14512 581 aa17■□□□□ 0.31
IRF9-214ENST00000561412 C9orf84Q5VXU9 1444 aa17■□□□□ 0.31
IRF9-214ENST00000561412 KIF14Q15058 1648 aa16.98■□□□□ 0.31
IRF9-214ENST00000561412 AFAP1Q8N556 730 aa16.97■□□□□ 0.31
IRF9-214ENST00000561412 EHMT2Q96KQ7 1210 aa16.96■□□□□ 0.31
IRF9-214ENST00000561412 MYO5CQ9NQX4 1742 aa16.94■□□□□ 0.3
IRF9-214ENST00000561412 SPATA31D1Q6ZQQ2 1576 aa16.94■□□□□ 0.3
IRF9-214ENST00000561412 DIP2CQ9Y2E4 1556 aa16.94■□□□□ 0.3
IRF9-214ENST00000561412 UHRF1BP1Q6BDS2 1440 aa16.93■□□□□ 0.3
IRF9-214ENST00000561412 C3P01024 1663 aa16.92■□□□□ 0.3
IRF9-214ENST00000561412 EFCAB2Q5VUJ9 269 aa16.92■□□□□ 0.3
IRF9-214ENST00000561412 ATP1B4Q9UN42 357 aaPredicted RBP16.92■□□□□ 0.3
IRF9-214ENST00000561412 KDM5CP41229 1560 aa16.92■□□□□ 0.3
IRF9-214ENST00000561412 ABCA6Q8N139 1617 aa16.92■□□□□ 0.3
IRF9-214ENST00000561412 LTBP4Q8N2S1 1624 aa16.92■□□□□ 0.3
IRF9-214ENST00000561412 SETD1BQ9UPS6 1966 aaKnown RBP16.91■□□□□ 0.3
IRF9-214ENST00000561412 LRRIQ1Q96JM4 1722 aa16.89■□□□□ 0.29
IRF9-214ENST00000561412 ZNF518AQ6AHZ1 1483 aa16.88■□□□□ 0.29
IRF9-214ENST00000561412 ARHGAP5Q13017 1502 aa16.88■□□□□ 0.29
IRF9-214ENST00000561412 PTPRTO14522 1441 aa16.87■□□□□ 0.29
IRF9-214ENST00000561412 DMRT2Q9Y5R5 561 aa16.87■□□□□ 0.29
IRF9-214ENST00000561412 EEA1Q15075 1411 aa16.87■□□□□ 0.29
IRF9-214ENST00000561412 TRAPPC8Q9Y2L5 1435 aa16.87■□□□□ 0.29
IRF9-214ENST00000561412 ARHGAP35Q9NRY4 1499 aa16.86■□□□□ 0.29
IRF9-214ENST00000561412 CDC42BPBQ9Y5S2 1711 aa16.86■□□□□ 0.29
IRF9-214ENST00000561412 MYT1LQ9UL68 1186 aa16.85■□□□□ 0.29
IRF9-214ENST00000561412 TROQ12816 1431 aaPredicted RBP16.84■□□□□ 0.29
IRF9-214ENST00000561412 NCOA1Q15788 1441 aa16.83■□□□□ 0.28
IRF9-214ENST00000561412 REREQ9P2R6 1566 aa16.83■□□□□ 0.28
IRF9-214ENST00000561412 MLH3Q9UHC1 1453 aa16.81■□□□□ 0.28
IRF9-214ENST00000561412 KIDINS220Q9ULH0 1771 aa16.8■□□□□ 0.28
IRF9-214ENST00000561412 ABCC1P33527 1531 aa16.8■□□□□ 0.28
IRF9-214ENST00000561412 AGLP35573 1532 aa16.8■□□□□ 0.28
IRF9-214ENST00000561412 FMN1Q68DA7 1419 aa16.79■□□□□ 0.28
IRF9-214ENST00000561412 CAMSAP1Q5T5Y3 1602 aa16.78■□□□□ 0.28
IRF9-214ENST00000561412 ZNF335Q9H4Z2 1342 aaPredicted RBP16.78■□□□□ 0.28
IRF9-214ENST00000561412 NCKAP5LQ9HCH0 1330 aa16.78■□□□□ 0.28
IRF9-214ENST00000561412 ITSN2Q9NZM3 1697 aa16.78■□□□□ 0.28
IRF9-214ENST00000561412 PREX2Q70Z35 1606 aa16.77■□□□□ 0.27
IRF9-214ENST00000561412 UBTFP17480 764 aaKnown RBP16.76■□□□□ 0.27
IRF9-214ENST00000561412 CDK11AQ9UQ88 783 aaPredicted RBP16.75■□□□□ 0.27
IRF9-214ENST00000561412 IQSEC2Q5JU85 1478 aa16.73■□□□□ 0.27
IRF9-214ENST00000561412 CLIP1P30622 1438 aa16.73■□□□□ 0.27
IRF9-214ENST00000561412 ESF1Q9H501 851 aaKnown RBP16.72■□□□□ 0.27
IRF9-214ENST00000561412 CDC42BPAQ5VT25 1732 aa16.72■□□□□ 0.27
IRF9-214ENST00000561412 UBAP1LF5GYI3 381 aa16.71■□□□□ 0.27
IRF9-214ENST00000561412 ZMYM3Q14202 1370 aa16.71■□□□□ 0.27
IRF9-214ENST00000561412 SAMD9LQ8IVG5 1584 aa16.71■□□□□ 0.27
IRF9-214ENST00000561412 SUPT6HQ7KZ85 1726 aaKnown RBP16.7■□□□□ 0.26
IRF9-214ENST00000561412 CNTLNQ9NXG0 1405 aa16.69■□□□□ 0.26
IRF9-214ENST00000561412 SYCP2Q9BX26 1530 aa16.68■□□□□ 0.26
IRF9-214ENST00000561412 NPATQ14207 1427 aa16.68■□□□□ 0.26
IRF9-214ENST00000561412 MROH2AA6NES4 1674 aa16.68■□□□□ 0.26
IRF9-214ENST00000561412 CLTCQ00610 1675 aaKnown RBP16.68■□□□□ 0.26
IRF9-214ENST00000561412 MYO3AQ8NEV4 1616 aa16.67■□□□□ 0.26
IRF9-214ENST00000561412 ZNF777Q9ULD5 760 aaPredicted RBP16.67■□□□□ 0.26
IRF9-214ENST00000561412 HNRNPMP52272 730 aaKnown RBP eCLIP16.66■□□□□ 0.26
IRF9-214ENST00000561412 PTPRKQ15262 1439 aa16.65■□□□□ 0.26
IRF9-214ENST00000561412 TCOF1Q13428 1488 aaKnown RBP16.65■□□□□ 0.26
IRF9-214ENST00000561412 ZNF142P52746 1687 aaPredicted RBP16.64■□□□□ 0.25
IRF9-214ENST00000561412 CEP170BQ9Y4F5 1589 aaPredicted RBP16.64■□□□□ 0.25
IRF9-214ENST00000561412 PLXNC1O60486 1568 aa16.63■□□□□ 0.25
IRF9-214ENST00000561412 CASKIN1Q8WXD9 1431 aa16.62■□□□□ 0.25
IRF9-214ENST00000561412 GPATCH8Q9UKJ3 1502 aaKnown RBP16.62■□□□□ 0.25
IRF9-214ENST00000561412 SPAG9O60271 1321 aaKnown RBP16.62■□□□□ 0.25
IRF9-214ENST00000561412 PLA2R1Q13018 1463 aa16.61■□□□□ 0.25
IRF9-214ENST00000561412 HSPA1LP34931 641 aa16.61■□□□□ 0.25
IRF9-214ENST00000561412 ATP7AQ04656 1500 aa16.6■□□□□ 0.25
IRF9-214ENST00000561412 GGT6Q6P531 493 aa16.6■□□□□ 0.25
IRF9-214ENST00000561412 MED1Q15648 1581 aaPredicted RBP16.6■□□□□ 0.25
IRF9-214ENST00000561412 INO80Q9ULG1 1556 aaPredicted RBP16.6■□□□□ 0.25
IRF9-214ENST00000561412 A2MP01023 1474 aa16.59■□□□□ 0.25
IRF9-214ENST00000561412 CCDC18Q5T9S5 1454 aa16.59■□□□□ 0.25
IRF9-214ENST00000561412 PIP4K2BP78356 416 aa16.58■□□□□ 0.24
IRF9-214ENST00000561412 PPP6R1Q9UPN7 881 aa16.58■□□□□ 0.24
IRF9-214ENST00000561412 PKD2Q13563 968 aa16.57■□□□□ 0.24
IRF9-214ENST00000561412 NEURL4Q96JN8 1562 aa16.56■□□□□ 0.24
IRF9-214ENST00000561412 SCAF1Q9H7N4 1312 aaKnown RBP16.56■□□□□ 0.24
IRF9-214ENST00000561412 DNMT1P26358 1616 aaKnown RBP16.56■□□□□ 0.24
IRF9-214ENST00000561412 ZNF644Q9H582 1327 aaPredicted RBP16.55■□□□□ 0.24
IRF9-214ENST00000561412 ALKQ9UM73 1620 aa16.55■□□□□ 0.24
IRF9-214ENST00000561412 FBXO31Q5XUX0 539 aaPredicted RBP16.54■□□□□ 0.24
IRF9-214ENST00000561412 A2ML1A8K2U0 1454 aa16.52■□□□□ 0.23
IRF9-214ENST00000561412 FYCO1Q9BQS8 1478 aa16.52■□□□□ 0.23
IRF9-214ENST00000561412 KIAA1107Q9UPP5 1409 aa16.52■□□□□ 0.23
IRF9-214ENST00000561412 CFDP1Q9UEE9 299 aaPredicted RBP16.51■□□□□ 0.23
IRF9-214ENST00000561412 SENP3Q9H4L4 574 aaPredicted RBP16.5■□□□□ 0.23
IRF9-214ENST00000561412 POLR1AO95602 1720 aaPredicted RBP16.49■□□□□ 0.23
IRF9-214ENST00000561412 SHANK2Q9UPX8 1470 aa16.48■□□□□ 0.23
IRF9-214ENST00000561412 VWDEQ8N2E2 1590 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms