RNA–Protein interactions for RNA: ENST00000561081.5

LRRC49-227, Transcript of leucine rich repeat containing 49, humanhuman

TSL 2

Gene LRRC49, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-227ENST00000561081 CAMSAP2Q08AD1 1489 aa15.31■□□□□ 0.04
LRRC49-227ENST00000561081 PTPRGP23470 1445 aa15.31■□□□□ 0.04
LRRC49-227ENST00000561081 PPP1R15AO75807 674 aaPredicted RBP15.3■□□□□ 0.04
LRRC49-227ENST00000561081 CFDP1Q9UEE9 299 aaPredicted RBP15.3■□□□□ 0.04
LRRC49-227ENST00000561081 DENND4BO75064 1496 aaPredicted RBP15.29■□□□□ 0.04
LRRC49-227ENST00000561081 PLEKHD1A6NEE1 506 aa15.29■□□□□ 0.04
LRRC49-227ENST00000561081 ACIN1Q9UKV3 1341 aaKnown RBP15.28■□□□□ 0.04
LRRC49-227ENST00000561081 ABCC10Q5T3U5 1492 aa15.28■□□□□ 0.04
LRRC49-227ENST00000561081 TONSLQ96HA7 1378 aa15.28■□□□□ 0.04
LRRC49-227ENST00000561081 CDC42BPAQ5VT25 1732 aa15.27■□□□□ 0.03
LRRC49-227ENST00000561081 CENPBP07199 599 aaPredicted RBP15.27■□□□□ 0.03
LRRC49-227ENST00000561081 TRIM52Q96A61 297 aa15.26■□□□□ 0.03
LRRC49-227ENST00000561081 CROCC2H7BZ55 1655 aa15.25■□□□□ 0.03
LRRC49-227ENST00000561081 ADGBQ8N7X0 1667 aa15.25■□□□□ 0.03
LRRC49-227ENST00000561081 SCAF1Q9H7N4 1312 aaKnown RBP15.24■□□□□ 0.03
LRRC49-227ENST00000561081 MPHOSPH9Q99550 1183 aa15.23■□□□□ 0.03
LRRC49-227ENST00000561081 KDM5BQ9UGL1 1544 aa15.22■□□□□ 0.03
LRRC49-227ENST00000561081 ADGRL2O95490 1459 aa15.22■□□□□ 0.03
LRRC49-227ENST00000561081 NCOA1Q15788 1441 aa15.22■□□□□ 0.03
LRRC49-227ENST00000561081 ZNF777Q9ULD5 760 aaPredicted RBP15.22■□□□□ 0.03
LRRC49-227ENST00000561081 ERCC6L2Q5T890 1561 aa15.21■□□□□ 0.03
LRRC49-227ENST00000561081 CLASP1Q7Z460 1538 aa15.19■□□□□ 0.02
LRRC49-227ENST00000561081 YTHDC1Q96MU7 727 aaKnown RBP15.18■□□□□ 0.02
LRRC49-227ENST00000561081 SHANK2Q9UPX8 1470 aa15.17■□□□□ 0.02
LRRC49-227ENST00000561081 ABCC2Q92887 1545 aa15.17■□□□□ 0.02
LRRC49-227ENST00000561081 ANKRD30AQ9BXX3 1397 aa15.16■□□□□ 0.02
LRRC49-227ENST00000561081 ANKRD30BQ9BXX2 1392 aa15.15■□□□□ 0.02
LRRC49-227ENST00000561081 PREX2Q70Z35 1606 aa15.15■□□□□ 0.02
LRRC49-227ENST00000561081 CDC42BPBQ9Y5S2 1711 aa15.14■□□□□ 0.01
LRRC49-227ENST00000561081 FOXD1Q16676 465 aa15.14■□□□□ 0.01
LRRC49-227ENST00000561081 PZPP20742 1482 aa15.14■□□□□ 0.01
LRRC49-227ENST00000561081 ARHGEF5Q12774 1597 aa15.14■□□□□ 0.01
LRRC49-227ENST00000561081 C9orf84Q5VXU9 1444 aa15.13■□□□□ 0.01
LRRC49-227ENST00000561081 SLC4A1APQ9BWU0 796 aaKnown RBP15.13■□□□□ 0.01
LRRC49-227ENST00000561081 SAMD9LQ8IVG5 1584 aa15.12■□□□□ 0.01
LRRC49-227ENST00000561081 MBD5Q9P267 1494 aa15.12■□□□□ 0.01
LRRC49-227ENST00000561081 RPRD2Q5VT52 1461 aaKnown RBP15.11■□□□□ 0.01
LRRC49-227ENST00000561081 TTC37Q6PGP7 1564 aa15.11■□□□□ 0.01
LRRC49-227ENST00000561081 ANKRD50Q9ULJ7 1429 aa15.11■□□□□ 0.01
LRRC49-227ENST00000561081 HIRIP3Q9BW71 556 aaPredicted RBP15.11■□□□□ 0.01
LRRC49-227ENST00000561081 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.1■□□□□ 0.01
LRRC49-227ENST00000561081 UHRF1BP1LA0JNW5 1464 aa15.09■□□□□ 0.01
LRRC49-227ENST00000561081 HNRNPMP52272 730 aaKnown RBP eCLIP15.09■□□□□ 0.01
LRRC49-227ENST00000561081 DDX10Q13206 875 aaKnown RBP15.09■□□□□ 0.01
LRRC49-227ENST00000561081 TSPY4P0CV99 314 aa15.08■□□□□ 0.01
LRRC49-227ENST00000561081 TSPY10P0CW01 314 aa15.08■□□□□ 0.01
LRRC49-227ENST00000561081 L3MBTL2Q969R5 705 aa15.08■□□□□ 0
LRRC49-227ENST00000561081 CCDC141Q6ZP82 1450 aa15.07■□□□□ 0
LRRC49-227ENST00000561081 ZCCHC11Q5TAX3 1644 aaKnown RBP15.07■□□□□ 0
LRRC49-227ENST00000561081 TEX14Q8IWB6 1497 aa15.06■□□□□ 0
LRRC49-227ENST00000561081 MYO5CQ9NQX4 1742 aa15.06■□□□□ 0
LRRC49-227ENST00000561081 ARHGAP5Q13017 1502 aa15.06■□□□□ 0
LRRC49-227ENST00000561081 KIAA1107Q9UPP5 1409 aa15.05■□□□□ 0
LRRC49-227ENST00000561081 RSPH4AQ5TD94 716 aa15.05■□□□□ 0
LRRC49-227ENST00000561081 KIF15Q9NS87 1388 aa15.05■□□□□ -0
LRRC49-227ENST00000561081 GTF3C3Q9Y5Q9 886 aa15.04■□□□□ -0
LRRC49-227ENST00000561081 KDM5DQ9BY66 1539 aa15.04■□□□□ -0
LRRC49-227ENST00000561081 SYCP2Q9BX26 1530 aa15.03■□□□□ -0
LRRC49-227ENST00000561081 MAST1Q9Y2H9 1570 aa15.02■□□□□ -0
LRRC49-227ENST00000561081 PKD2Q13563 968 aa15.01□□□□□ -0.01
LRRC49-227ENST00000561081 NUP155O75694 1391 aa15.01□□□□□ -0.01
LRRC49-227ENST00000561081 PLEKHH2Q8IVE3 1493 aa15□□□□□ -0.01
LRRC49-227ENST00000561081 KCNH8Q96L42 1107 aa15□□□□□ -0.01
LRRC49-227ENST00000561081 HSPA5P11021 654 aaKnown RBP14.99□□□□□ -0.01
LRRC49-227ENST00000561081 PLCH2O75038 1416 aa14.99□□□□□ -0.01
LRRC49-227ENST00000561081 NBPF8Q3BBV2 869 aa14.98□□□□□ -0.01
LRRC49-227ENST00000561081 EIF4G2P78344 907 aaKnown RBP eCLIP14.98□□□□□ -0.01
LRRC49-227ENST00000561081 PLXNC1O60486 1568 aa14.96□□□□□ -0.01
LRRC49-227ENST00000561081 ARHGEF12Q9NZN5 1544 aa14.96□□□□□ -0.01
LRRC49-227ENST00000561081 FAM135AQ9P2D6 1515 aa14.93□□□□□ -0.02
LRRC49-227ENST00000561081 WASHC2AQ641Q2 1341 aa14.93□□□□□ -0.02
LRRC49-227ENST00000561081 ANP32CO43423 234 aa14.93□□□□□ -0.02
LRRC49-227ENST00000561081 ABCC1P33527 1531 aa14.93□□□□□ -0.02
LRRC49-227ENST00000561081 UNC13BO14795 1591 aa14.93□□□□□ -0.02
LRRC49-227ENST00000561081 EFCAB2Q5VUJ9 269 aa14.93□□□□□ -0.02
LRRC49-227ENST00000561081 ARAP3Q8WWN8 1544 aa14.92□□□□□ -0.02
LRRC49-227ENST00000561081 CCER2I3L3R5 266 aa14.91□□□□□ -0.02
LRRC49-227ENST00000561081 SPATA31E1Q6ZUB1 1445 aa14.91□□□□□ -0.02
LRRC49-227ENST00000561081 WDR7Q9Y4E6 1490 aa14.91□□□□□ -0.02
LRRC49-227ENST00000561081 DUOX2Q9NRD8 1548 aa14.9□□□□□ -0.02
LRRC49-227ENST00000561081 UHRF1BP1Q6BDS2 1440 aa14.88□□□□□ -0.03
LRRC49-227ENST00000561081 IQGAP3Q86VI3 1631 aa14.87□□□□□ -0.03
LRRC49-227ENST00000561081 ERBINQ96RT1 1412 aa14.87□□□□□ -0.03
LRRC49-227ENST00000561081 TRAPPC8Q9Y2L5 1435 aa14.87□□□□□ -0.03
LRRC49-227ENST00000561081 C11orf95C9JLR9 678 aaPredicted RBP14.86□□□□□ -0.03
LRRC49-227ENST00000561081 POLR1AO95602 1720 aaPredicted RBP14.86□□□□□ -0.03
LRRC49-227ENST00000561081 CCDC7Q96M83 1385 aa14.86□□□□□ -0.03
LRRC49-227ENST00000561081 MAGI2Q86UL8 1455 aa14.86□□□□□ -0.03
LRRC49-227ENST00000561081 ABCA9Q8IUA7 1624 aa14.85□□□□□ -0.03
LRRC49-227ENST00000561081 OSCARQ8IYS5 282 aa14.84□□□□□ -0.03
LRRC49-227ENST00000561081 CNTLNQ9NXG0 1405 aa14.84□□□□□ -0.03
LRRC49-227ENST00000561081 RALGAPBQ86X10 1494 aa14.83□□□□□ -0.04
LRRC49-227ENST00000561081 RTEL1-TNFRSF6BF6WH68 1400 aa14.83□□□□□ -0.04
LRRC49-227ENST00000561081 ZNF326Q5BKZ1 582 aaKnown RBP14.82□□□□□ -0.04
LRRC49-227ENST00000561081 ASXL2Q76L83 1435 aa14.82□□□□□ -0.04
LRRC49-227ENST00000561081 ZFYVE16Q7Z3T8 1539 aa14.82□□□□□ -0.04
LRRC49-227ENST00000561081 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.82□□□□□ -0.04
LRRC49-227ENST00000561081 PLA2R1Q13018 1463 aa14.82□□□□□ -0.04
LRRC49-227ENST00000561081 KDM5CP41229 1560 aa14.82□□□□□ -0.04
LRRC49-227ENST00000561081 FANCAO15360 1455 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms