RNA–Protein interactions for RNA: ENST00000560997.1

SNX22-206, Transcript of sorting nexin 22, humanhuman

TSL 1 (best)

Gene SNX22, Length 3,367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX22-206ENST00000560997 PPP6R1Q9UPN7 881 aa13.74□□□□□ -0.21
SNX22-206ENST00000560997 EIF4G3O43432 1585 aaKnown RBP13.74□□□□□ -0.21
SNX22-206ENST00000560997 GRIN2AQ12879 1464 aa13.73□□□□□ -0.21
SNX22-206ENST00000560997 WASHC2AQ641Q2 1341 aa13.73□□□□□ -0.21
SNX22-206ENST00000560997 RAPGEF6Q8TEU7 1601 aa13.73□□□□□ -0.21
SNX22-206ENST00000560997 ABCC5O15440 1437 aa13.73□□□□□ -0.21
SNX22-206ENST00000560997 L3MBTL2Q969R5 705 aa13.72□□□□□ -0.21
SNX22-206ENST00000560997 TSHZ2Q9NRE2 1034 aa13.72□□□□□ -0.21
SNX22-206ENST00000560997 DNMT1P26358 1616 aaKnown RBP13.72□□□□□ -0.21
SNX22-206ENST00000560997 ROCK1Q13464 1354 aa13.7□□□□□ -0.22
SNX22-206ENST00000560997 PRG4Q92954 1404 aaPredicted RBP13.69□□□□□ -0.22
SNX22-206ENST00000560997 EIF4G2P78344 907 aaKnown RBP eCLIP13.69□□□□□ -0.22
SNX22-206ENST00000560997 ANKRD30BQ9BXX2 1392 aa13.68□□□□□ -0.22
SNX22-206ENST00000560997 PLB1Q6P1J6 1458 aa13.67□□□□□ -0.22
SNX22-206ENST00000560997 CEP170Q5SW79 1584 aa13.66□□□□□ -0.22
SNX22-206ENST00000560997 RPRD2Q5VT52 1461 aaKnown RBP13.66□□□□□ -0.22
SNX22-206ENST00000560997 NBPF8Q3BBV2 869 aa13.66□□□□□ -0.22
SNX22-206ENST00000560997 CDK11AQ9UQ88 783 aaPredicted RBP13.66□□□□□ -0.22
SNX22-206ENST00000560997 C11orf95C9JLR9 678 aaPredicted RBP13.66□□□□□ -0.22
SNX22-206ENST00000560997 TEX14Q8IWB6 1497 aa13.65□□□□□ -0.22
SNX22-206ENST00000560997 SLC4A1APQ9BWU0 796 aaKnown RBP13.65□□□□□ -0.22
SNX22-206ENST00000560997 TROQ12816 1431 aaPredicted RBP13.65□□□□□ -0.22
SNX22-206ENST00000560997 CAMSAP2Q08AD1 1489 aa13.64□□□□□ -0.23
SNX22-206ENST00000560997 NEFLP07196 543 aa13.64□□□□□ -0.23
SNX22-206ENST00000560997 CHMP7Q8WUX9 453 aaPredicted RBP13.64□□□□□ -0.23
SNX22-206ENST00000560997 KIF14Q15058 1648 aa13.64□□□□□ -0.23
SNX22-206ENST00000560997 ERCC6Q03468 1493 aa13.64□□□□□ -0.23
SNX22-206ENST00000560997 FBLN2P98095 1184 aa13.63□□□□□ -0.23
SNX22-206ENST00000560997 MAGI1Q96QZ7 1491 aaPredicted RBP13.63□□□□□ -0.23
SNX22-206ENST00000560997 HNRNPUQ00839 825 aaKnown RBP eCLIP13.63□□□□□ -0.23
SNX22-206ENST00000560997 CFDP1Q9UEE9 299 aaPredicted RBP13.63□□□□□ -0.23
SNX22-206ENST00000560997 CNTLNQ9NXG0 1405 aa13.63□□□□□ -0.23
SNX22-206ENST00000560997 MYT1Q01538 1121 aa13.62□□□□□ -0.23
SNX22-206ENST00000560997 NCOA1Q15788 1441 aa13.62□□□□□ -0.23
SNX22-206ENST00000560997 PZPP20742 1482 aa13.62□□□□□ -0.23
SNX22-206ENST00000560997 GPATCH8Q9UKJ3 1502 aaKnown RBP13.62□□□□□ -0.23
SNX22-206ENST00000560997 ZNF777Q9ULD5 760 aaPredicted RBP13.62□□□□□ -0.23
SNX22-206ENST00000560997 SYNJ2O15056 1496 aa13.61□□□□□ -0.23
SNX22-206ENST00000560997 CCDC7Q96M83 1385 aa13.61□□□□□ -0.23
SNX22-206ENST00000560997 CCDC184Q52MB2 194 aa13.61□□□□□ -0.23
SNX22-206ENST00000560997 ITSN2Q9NZM3 1697 aa13.6□□□□□ -0.23
SNX22-206ENST00000560997 ADGBQ8N7X0 1667 aa13.59□□□□□ -0.23
SNX22-206ENST00000560997 ADCY10Q96PN6 1610 aa13.58□□□□□ -0.23
SNX22-206ENST00000560997 JPH4Q96JJ6 628 aa13.57□□□□□ -0.24
SNX22-206ENST00000560997 CROCC2H7BZ55 1655 aa13.57□□□□□ -0.24
SNX22-206ENST00000560997 SPATA31E1Q6ZUB1 1445 aa13.57□□□□□ -0.24
SNX22-206ENST00000560997 NUP160Q12769 1436 aa13.56□□□□□ -0.24
SNX22-206ENST00000560997 PRKRIP1Q9H875 184 aaPredicted RBP13.56□□□□□ -0.24
SNX22-206ENST00000560997 CARMIL2Q6F5E8 1435 aa13.56□□□□□ -0.24
SNX22-206ENST00000560997 KIF7Q2M1P5 1343 aa13.56□□□□□ -0.24
SNX22-206ENST00000560997 ADGRL2O95490 1459 aa13.55□□□□□ -0.24
SNX22-206ENST00000560997 KIAA1107Q9UPP5 1409 aa13.54□□□□□ -0.24
SNX22-206ENST00000560997 PKD2Q13563 968 aa13.53□□□□□ -0.24
SNX22-206ENST00000560997 CDC42BPAQ5VT25 1732 aa13.53□□□□□ -0.24
SNX22-206ENST00000560997 IRX6P78412 446 aaPredicted RBP13.53□□□□□ -0.24
SNX22-206ENST00000560997 MBD5Q9P267 1494 aa13.53□□□□□ -0.24
SNX22-206ENST00000560997 POLR1AO95602 1720 aaPredicted RBP13.53□□□□□ -0.24
SNX22-206ENST00000560997 ANKRD30AQ9BXX3 1397 aa13.53□□□□□ -0.24
SNX22-206ENST00000560997 ZNF326Q5BKZ1 582 aaKnown RBP13.52□□□□□ -0.25
SNX22-206ENST00000560997 FAM9BQ8IZU0 186 aa13.52□□□□□ -0.25
SNX22-206ENST00000560997 ABCA8O94911 1581 aa13.51□□□□□ -0.25
SNX22-206ENST00000560997 ANKRD50Q9ULJ7 1429 aa13.51□□□□□ -0.25
SNX22-206ENST00000560997 ATP10BO94823 1461 aa13.51□□□□□ -0.25
SNX22-206ENST00000560997 MRS2Q9HD23 443 aa13.51□□□□□ -0.25
SNX22-206ENST00000560997 ABCC10Q5T3U5 1492 aa13.5□□□□□ -0.25
SNX22-206ENST00000560997 PLEKHD1A6NEE1 506 aa13.5□□□□□ -0.25
SNX22-206ENST00000560997 KCNA4P22459 653 aa13.49□□□□□ -0.25
SNX22-206ENST00000560997 BCORL1Q5H9F3 1711 aa13.48□□□□□ -0.25
SNX22-206ENST00000560997 C9orf84Q5VXU9 1444 aa13.48□□□□□ -0.25
SNX22-206ENST00000560997 USP47Q96K76 1375 aa13.48□□□□□ -0.25
SNX22-206ENST00000560997 NUP155O75694 1391 aa13.47□□□□□ -0.25
SNX22-206ENST00000560997 CNGB1Q14028 1251 aaPredicted RBP13.47□□□□□ -0.25
SNX22-206ENST00000560997 POLR3GLQ9BT43 218 aa13.46□□□□□ -0.25
SNX22-206ENST00000560997 SHANK2Q9UPX8 1470 aa13.46□□□□□ -0.26
SNX22-206ENST00000560997 RBM19Q9Y4C8 960 aaKnown RBP13.45□□□□□ -0.26
SNX22-206ENST00000560997 HNRNPMP52272 730 aaKnown RBP eCLIP13.45□□□□□ -0.26
SNX22-206ENST00000560997 DHX29Q7Z478 1369 aaKnown RBP13.44□□□□□ -0.26
SNX22-206ENST00000560997 KDM5CP41229 1560 aa13.44□□□□□ -0.26
SNX22-206ENST00000560997 ZBED9Q6R2W3 1325 aa13.42□□□□□ -0.26
SNX22-206ENST00000560997 TSPY4P0CV99 314 aa13.42□□□□□ -0.26
SNX22-206ENST00000560997 TSPY10P0CW01 314 aa13.42□□□□□ -0.26
SNX22-206ENST00000560997 KIF15Q9NS87 1388 aa13.42□□□□□ -0.26
SNX22-206ENST00000560997 UHRF1BP1Q6BDS2 1440 aa13.41□□□□□ -0.26
SNX22-206ENST00000560997 KDM5DQ9BY66 1539 aa13.41□□□□□ -0.26
SNX22-206ENST00000560997 RALGAPBQ86X10 1494 aa13.4□□□□□ -0.26
SNX22-206ENST00000560997 KDM2AQ9Y2K7 1162 aa13.4□□□□□ -0.26
SNX22-206ENST00000560997 PTPRGP23470 1445 aa13.4□□□□□ -0.26
SNX22-206ENST00000560997 ARHGEF5Q12774 1597 aa13.39□□□□□ -0.27
SNX22-206ENST00000560997 SAMD9LQ8IVG5 1584 aa13.39□□□□□ -0.27
SNX22-206ENST00000560997 CDC42BPBQ9Y5S2 1711 aa13.39□□□□□ -0.27
SNX22-206ENST00000560997 ANP32EQ9BTT0 268 aa13.38□□□□□ -0.27
SNX22-206ENST00000560997 CARD11Q9BXL7 1154 aa13.38□□□□□ -0.27
SNX22-206ENST00000560997 ARHGEF12Q9NZN5 1544 aa13.38□□□□□ -0.27
SNX22-206ENST00000560997 DCAF11Q8TEB1 546 aa13.37□□□□□ -0.27
SNX22-206ENST00000560997 PREX2Q70Z35 1606 aa13.37□□□□□ -0.27
SNX22-206ENST00000560997 CCDC141Q6ZP82 1450 aa13.36□□□□□ -0.27
SNX22-206ENST00000560997 SENP3-EIF4A1A0A087X0R7 540 aa13.35□□□□□ -0.27
SNX22-206ENST00000560997 ARID4BQ4LE39 1312 aaPredicted RBP13.35□□□□□ -0.27
SNX22-206ENST00000560997 ST20-MTHFSA0A0A6YYL1 179 aa13.35□□□□□ -0.27
SNX22-206ENST00000560997 PPP4R2Q9NY27 417 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms