RNA–Protein interactions for RNA: ENST00000560755.5

LRRC49-225, Transcript of leucine rich repeat containing 49, humanhuman

TSL 4

Gene LRRC49, Length 398 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-225ENST00000560755 YEATS2Q9ULM3 1422 aa13.8□□□□□ -0.2
LRRC49-225ENST00000560755 ILDR2Q71H61 639 aa13.79□□□□□ -0.2
LRRC49-225ENST00000560755 FER1L4A9Z1Z3 1794 aa13.78□□□□□ -0.2
LRRC49-225ENST00000560755 SOCS7O14512 581 aa13.78□□□□□ -0.2
LRRC49-225ENST00000560755 ZMYM4Q5VZL5 1548 aa13.77□□□□□ -0.21
LRRC49-225ENST00000560755 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.76□□□□□ -0.21
LRRC49-225ENST00000560755 MAGI2Q86UL8 1455 aa13.76□□□□□ -0.21
LRRC49-225ENST00000560755 CSRNP3Q8WYN3 585 aa13.76□□□□□ -0.21
LRRC49-225ENST00000560755 SIGLEC1Q9BZZ2 1709 aa13.76□□□□□ -0.21
LRRC49-225ENST00000560755 HECW1Q76N89 1606 aa13.75□□□□□ -0.21
LRRC49-225ENST00000560755 DMRT2Q9Y5R5 561 aa13.75□□□□□ -0.21
LRRC49-225ENST00000560755 TTC37Q6PGP7 1564 aa13.75□□□□□ -0.21
LRRC49-225ENST00000560755 SCAPERQ9BY12 1400 aa13.74□□□□□ -0.21
LRRC49-225ENST00000560755 CEBPAP49715 358 aaPredicted RBP13.74□□□□□ -0.21
LRRC49-225ENST00000560755 MYT1LQ9UL68 1186 aa13.73□□□□□ -0.21
LRRC49-225ENST00000560755 PREX1Q8TCU6 1659 aa13.72□□□□□ -0.21
LRRC49-225ENST00000560755 ATP10AO60312 1499 aa13.71□□□□□ -0.21
LRRC49-225ENST00000560755 C9orf84Q5VXU9 1444 aa13.71□□□□□ -0.22
LRRC49-225ENST00000560755 ATP1B4Q9UN42 357 aaPredicted RBP13.7□□□□□ -0.22
LRRC49-225ENST00000560755 UHRF1BP1Q6BDS2 1440 aa13.7□□□□□ -0.22
LRRC49-225ENST00000560755 ARHGEF12Q9NZN5 1544 aa13.69□□□□□ -0.22
LRRC49-225ENST00000560755 SPATA31D1Q6ZQQ2 1576 aa13.69□□□□□ -0.22
LRRC49-225ENST00000560755 PLCH2O75038 1416 aa13.68□□□□□ -0.22
LRRC49-225ENST00000560755 EFCAB2Q5VUJ9 269 aa13.68□□□□□ -0.22
LRRC49-225ENST00000560755 CDK13Q14004 1512 aaKnown RBP13.67□□□□□ -0.22
LRRC49-225ENST00000560755 ESF1Q9H501 851 aaKnown RBP13.66□□□□□ -0.22
LRRC49-225ENST00000560755 STRCQ7RTU9 1775 aa13.66□□□□□ -0.22
LRRC49-225ENST00000560755 CDK11AQ9UQ88 783 aaPredicted RBP13.63□□□□□ -0.23
LRRC49-225ENST00000560755 ZNF518AQ6AHZ1 1483 aa13.62□□□□□ -0.23
LRRC49-225ENST00000560755 MYO5CQ9NQX4 1742 aa13.62□□□□□ -0.23
LRRC49-225ENST00000560755 MAPK8IP2Q13387 824 aaPredicted RBP13.62□□□□□ -0.23
LRRC49-225ENST00000560755 AFAP1Q8N556 730 aa13.62□□□□□ -0.23
LRRC49-225ENST00000560755 PTPRTO14522 1441 aa13.62□□□□□ -0.23
LRRC49-225ENST00000560755 EEA1Q15075 1411 aa13.61□□□□□ -0.23
LRRC49-225ENST00000560755 ARHGAP5Q13017 1502 aa13.6□□□□□ -0.23
LRRC49-225ENST00000560755 SETD1BQ9UPS6 1966 aaKnown RBP13.6□□□□□ -0.23
LRRC49-225ENST00000560755 EHMT2Q96KQ7 1210 aa13.58□□□□□ -0.24
LRRC49-225ENST00000560755 KIF14Q15058 1648 aa13.57□□□□□ -0.24
LRRC49-225ENST00000560755 C3P01024 1663 aa13.56□□□□□ -0.24
LRRC49-225ENST00000560755 DIP2CQ9Y2E4 1556 aa13.56□□□□□ -0.24
LRRC49-225ENST00000560755 CLIP1P30622 1438 aa13.56□□□□□ -0.24
LRRC49-225ENST00000560755 TRAPPC8Q9Y2L5 1435 aa13.56□□□□□ -0.24
LRRC49-225ENST00000560755 KDM5CP41229 1560 aa13.55□□□□□ -0.24
LRRC49-225ENST00000560755 LTBP4Q8N2S1 1624 aa13.55□□□□□ -0.24
LRRC49-225ENST00000560755 FMN1Q68DA7 1419 aa13.55□□□□□ -0.24
LRRC49-225ENST00000560755 IQSEC2Q5JU85 1478 aa13.55□□□□□ -0.24
LRRC49-225ENST00000560755 UBTFP17480 764 aaKnown RBP13.54□□□□□ -0.24
LRRC49-225ENST00000560755 UBAP1LF5GYI3 381 aa13.53□□□□□ -0.24
LRRC49-225ENST00000560755 TROQ12816 1431 aaPredicted RBP13.53□□□□□ -0.24
LRRC49-225ENST00000560755 NCOA1Q15788 1441 aa13.53□□□□□ -0.24
LRRC49-225ENST00000560755 REREQ9P2R6 1566 aa13.53□□□□□ -0.24
LRRC49-225ENST00000560755 ABCA6Q8N139 1617 aa13.53□□□□□ -0.24
LRRC49-225ENST00000560755 MLH3Q9UHC1 1453 aa13.51□□□□□ -0.25
LRRC49-225ENST00000560755 CNTLNQ9NXG0 1405 aa13.51□□□□□ -0.25
LRRC49-225ENST00000560755 SCAF1Q9H7N4 1312 aaKnown RBP13.51□□□□□ -0.25
LRRC49-225ENST00000560755 CAMSAP1Q5T5Y3 1602 aa13.5□□□□□ -0.25
LRRC49-225ENST00000560755 AGLP35573 1532 aa13.49□□□□□ -0.25
LRRC49-225ENST00000560755 NCKAP5LQ9HCH0 1330 aa13.49□□□□□ -0.25
LRRC49-225ENST00000560755 ZNF335Q9H4Z2 1342 aaPredicted RBP13.48□□□□□ -0.25
LRRC49-225ENST00000560755 CDC42BPBQ9Y5S2 1711 aa13.47□□□□□ -0.25
LRRC49-225ENST00000560755 ABCC1P33527 1531 aa13.46□□□□□ -0.25
LRRC49-225ENST00000560755 ZNF777Q9ULD5 760 aaPredicted RBP13.46□□□□□ -0.25
LRRC49-225ENST00000560755 ARHGAP35Q9NRY4 1499 aa13.46□□□□□ -0.25
LRRC49-225ENST00000560755 ITSN2Q9NZM3 1697 aa13.45□□□□□ -0.26
LRRC49-225ENST00000560755 NPATQ14207 1427 aa13.45□□□□□ -0.26
LRRC49-225ENST00000560755 ZMYM3Q14202 1370 aa13.45□□□□□ -0.26
LRRC49-225ENST00000560755 PREX2Q70Z35 1606 aa13.44□□□□□ -0.26
LRRC49-225ENST00000560755 KIDINS220Q9ULH0 1771 aa13.43□□□□□ -0.26
LRRC49-225ENST00000560755 PKD2Q13563 968 aa13.43□□□□□ -0.26
LRRC49-225ENST00000560755 PIP4K2BP78356 416 aa13.42□□□□□ -0.26
LRRC49-225ENST00000560755 MROH2AA6NES4 1674 aa13.42□□□□□ -0.26
LRRC49-225ENST00000560755 SUPT6HQ7KZ85 1726 aaKnown RBP13.42□□□□□ -0.26
LRRC49-225ENST00000560755 SPAG9O60271 1321 aaKnown RBP13.41□□□□□ -0.26
LRRC49-225ENST00000560755 LRRIQ1Q96JM4 1722 aa13.41□□□□□ -0.26
LRRC49-225ENST00000560755 GGT6Q6P531 493 aa13.4□□□□□ -0.26
LRRC49-225ENST00000560755 PPP4R3CPQ6ZMV5 832 aa13.4□□□□□ -0.26
LRRC49-225ENST00000560755 PLA2R1Q13018 1463 aa13.39□□□□□ -0.27
LRRC49-225ENST00000560755 SAMD9LQ8IVG5 1584 aa13.39□□□□□ -0.27
LRRC49-225ENST00000560755 CLTCQ00610 1675 aaKnown RBP13.39□□□□□ -0.27
LRRC49-225ENST00000560755 MYO3AQ8NEV4 1616 aa13.39□□□□□ -0.27
LRRC49-225ENST00000560755 CEP170BQ9Y4F5 1589 aaPredicted RBP13.38□□□□□ -0.27
LRRC49-225ENST00000560755 CCDC18Q5T9S5 1454 aa13.38□□□□□ -0.27
LRRC49-225ENST00000560755 HSPA1LP34931 641 aa13.38□□□□□ -0.27
LRRC49-225ENST00000560755 HNRNPMP52272 730 aaKnown RBP eCLIP13.38□□□□□ -0.27
LRRC49-225ENST00000560755 CDC42BPAQ5VT25 1732 aa13.37□□□□□ -0.27
LRRC49-225ENST00000560755 TOM1O60784 492 aa13.37□□□□□ -0.27
LRRC49-225ENST00000560755 ZNF142P52746 1687 aaPredicted RBP13.37□□□□□ -0.27
LRRC49-225ENST00000560755 SYCP2Q9BX26 1530 aa13.36□□□□□ -0.27
LRRC49-225ENST00000560755 MED1Q15648 1581 aaPredicted RBP13.36□□□□□ -0.27
LRRC49-225ENST00000560755 TCOF1Q13428 1488 aaKnown RBP13.36□□□□□ -0.27
LRRC49-225ENST00000560755 PTPRKQ15262 1439 aa13.35□□□□□ -0.27
LRRC49-225ENST00000560755 ATP7AQ04656 1500 aa13.34□□□□□ -0.27
LRRC49-225ENST00000560755 CASKIN1Q8WXD9 1431 aa13.34□□□□□ -0.27
LRRC49-225ENST00000560755 A2MP01023 1474 aa13.34□□□□□ -0.27
LRRC49-225ENST00000560755 CFDP1Q9UEE9 299 aaPredicted RBP13.32□□□□□ -0.28
LRRC49-225ENST00000560755 A2ML1A8K2U0 1454 aa13.3□□□□□ -0.28
LRRC49-225ENST00000560755 PLEKHH2Q8IVE3 1493 aa13.3□□□□□ -0.28
LRRC49-225ENST00000560755 CPS1P31327 1500 aa13.3□□□□□ -0.28
LRRC49-225ENST00000560755 GPATCH8Q9UKJ3 1502 aaKnown RBP13.3□□□□□ -0.28
LRRC49-225ENST00000560755 PLXNC1O60486 1568 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms