RNA–Protein interactions for RNA: ENST00000560521.5

RABGGTA-217, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-217ENST00000560521 DISP3Q9P2K9 1392 aa15.32■□□□□ 0.04
RABGGTA-217ENST00000560521 MAGI2Q86UL8 1455 aa15.32■□□□□ 0.04
RABGGTA-217ENST00000560521 SOCS7O14512 581 aa15.31■□□□□ 0.04
RABGGTA-217ENST00000560521 ARHGEF12Q9NZN5 1544 aa15.29■□□□□ 0.04
RABGGTA-217ENST00000560521 RANGAP1P46060 587 aaPredicted RBP15.27■□□□□ 0.04
RABGGTA-217ENST00000560521 CEBPAP49715 358 aaPredicted RBP15.26■□□□□ 0.03
RABGGTA-217ENST00000560521 CSRNP3Q8WYN3 585 aa15.26■□□□□ 0.03
RABGGTA-217ENST00000560521 ATP10AO60312 1499 aa15.26■□□□□ 0.03
RABGGTA-217ENST00000560521 MYO5CQ9NQX4 1742 aa15.26■□□□□ 0.03
RABGGTA-217ENST00000560521 SCAPERQ9BY12 1400 aa15.26■□□□□ 0.03
RABGGTA-217ENST00000560521 PLCH2O75038 1416 aa15.23■□□□□ 0.03
RABGGTA-217ENST00000560521 SPATA31D1Q6ZQQ2 1576 aa15.23■□□□□ 0.03
RABGGTA-217ENST00000560521 DMRT2Q9Y5R5 561 aa15.22■□□□□ 0.03
RABGGTA-217ENST00000560521 C9orf84Q5VXU9 1444 aa15.22■□□□□ 0.03
RABGGTA-217ENST00000560521 CDK13Q14004 1512 aaKnown RBP15.22■□□□□ 0.03
RABGGTA-217ENST00000560521 C3P01024 1663 aa15.22■□□□□ 0.03
RABGGTA-217ENST00000560521 UHRF1BP1Q6BDS2 1440 aa15.17■□□□□ 0.02
RABGGTA-217ENST00000560521 LTBP4Q8N2S1 1624 aa15.17■□□□□ 0.02
RABGGTA-217ENST00000560521 PTPRTO14522 1441 aa15.16■□□□□ 0.02
RABGGTA-217ENST00000560521 KDM5CP41229 1560 aa15.15■□□□□ 0.02
RABGGTA-217ENST00000560521 CDC42BPBQ9Y5S2 1711 aa15.15■□□□□ 0.02
RABGGTA-217ENST00000560521 KIF14Q15058 1648 aa15.15■□□□□ 0.02
RABGGTA-217ENST00000560521 EFCAB2Q5VUJ9 269 aa15.15■□□□□ 0.02
RABGGTA-217ENST00000560521 DIP2CQ9Y2E4 1556 aa15.14■□□□□ 0.01
RABGGTA-217ENST00000560521 LRRIQ1Q96JM4 1722 aa15.14■□□□□ 0.01
RABGGTA-217ENST00000560521 AFAP1Q8N556 730 aa15.13■□□□□ 0.01
RABGGTA-217ENST00000560521 ZNF518AQ6AHZ1 1483 aa15.13■□□□□ 0.01
RABGGTA-217ENST00000560521 REREQ9P2R6 1566 aa15.12■□□□□ 0.01
RABGGTA-217ENST00000560521 ABCA6Q8N139 1617 aa15.12■□□□□ 0.01
RABGGTA-217ENST00000560521 IQSEC2Q5JU85 1478 aa15.09■□□□□ 0.01
RABGGTA-217ENST00000560521 EEA1Q15075 1411 aa15.09■□□□□ 0.01
RABGGTA-217ENST00000560521 ARHGAP5Q13017 1502 aa15.08■□□□□ 0.01
RABGGTA-217ENST00000560521 SUPT6HQ7KZ85 1726 aaKnown RBP15.08■□□□□ 0
RABGGTA-217ENST00000560521 KIDINS220Q9ULH0 1771 aa15.07■□□□□ 0
RABGGTA-217ENST00000560521 ATP1B4Q9UN42 357 aaPredicted RBP15.07■□□□□ 0
RABGGTA-217ENST00000560521 TRAPPC8Q9Y2L5 1435 aa15.07■□□□□ 0
RABGGTA-217ENST00000560521 ITSN2Q9NZM3 1697 aa15.06■□□□□ 0
RABGGTA-217ENST00000560521 MYT1LQ9UL68 1186 aa15.06■□□□□ 0
RABGGTA-217ENST00000560521 NCOA1Q15788 1441 aa15.06■□□□□ 0
RABGGTA-217ENST00000560521 MLH3Q9UHC1 1453 aa15.06■□□□□ 0
RABGGTA-217ENST00000560521 AGLP35573 1532 aa15.06■□□□□ 0
RABGGTA-217ENST00000560521 MROH2AA6NES4 1674 aa15.04■□□□□ -0
RABGGTA-217ENST00000560521 CAMSAP1Q5T5Y3 1602 aa15.04■□□□□ -0
RABGGTA-217ENST00000560521 TROQ12816 1431 aaPredicted RBP15.03■□□□□ -0
RABGGTA-217ENST00000560521 CDK11AQ9UQ88 783 aaPredicted RBP15.03■□□□□ -0
RABGGTA-217ENST00000560521 CDC42BPAQ5VT25 1732 aa15.03■□□□□ -0
RABGGTA-217ENST00000560521 PREX2Q70Z35 1606 aa15.03■□□□□ -0
RABGGTA-217ENST00000560521 ESF1Q9H501 851 aaKnown RBP15.02■□□□□ -0
RABGGTA-217ENST00000560521 FMN1Q68DA7 1419 aa15.01□□□□□ -0.01
RABGGTA-217ENST00000560521 ABCC1P33527 1531 aa15.01□□□□□ -0.01
RABGGTA-217ENST00000560521 ARHGAP35Q9NRY4 1499 aa15□□□□□ -0.01
RABGGTA-217ENST00000560521 ZNF142P52746 1687 aaPredicted RBP14.98□□□□□ -0.01
RABGGTA-217ENST00000560521 CLTCQ00610 1675 aaKnown RBP14.98□□□□□ -0.01
RABGGTA-217ENST00000560521 CNTLNQ9NXG0 1405 aa14.98□□□□□ -0.01
RABGGTA-217ENST00000560521 ZNF335Q9H4Z2 1342 aaPredicted RBP14.97□□□□□ -0.01
RABGGTA-217ENST00000560521 NCKAP5LQ9HCH0 1330 aa14.97□□□□□ -0.01
RABGGTA-217ENST00000560521 CLIP1P30622 1438 aa14.97□□□□□ -0.01
RABGGTA-217ENST00000560521 UBAP1LF5GYI3 381 aa14.96□□□□□ -0.01
RABGGTA-217ENST00000560521 NPATQ14207 1427 aa14.96□□□□□ -0.01
RABGGTA-217ENST00000560521 ZMYM3Q14202 1370 aa14.95□□□□□ -0.02
RABGGTA-217ENST00000560521 MYO3AQ8NEV4 1616 aa14.95□□□□□ -0.02
RABGGTA-217ENST00000560521 EHMT2Q96KQ7 1210 aa14.94□□□□□ -0.02
RABGGTA-217ENST00000560521 SAMD9LQ8IVG5 1584 aa14.94□□□□□ -0.02
RABGGTA-217ENST00000560521 UBTFP17480 764 aaKnown RBP14.93□□□□□ -0.02
RABGGTA-217ENST00000560521 CEP170BQ9Y4F5 1589 aaPredicted RBP14.91□□□□□ -0.02
RABGGTA-217ENST00000560521 PLA2R1Q13018 1463 aa14.9□□□□□ -0.02
RABGGTA-217ENST00000560521 TCOF1Q13428 1488 aaKnown RBP14.9□□□□□ -0.02
RABGGTA-217ENST00000560521 PKD2Q13563 968 aa14.89□□□□□ -0.03
RABGGTA-217ENST00000560521 MED1Q15648 1581 aaPredicted RBP14.89□□□□□ -0.03
RABGGTA-217ENST00000560521 POLR1AO95602 1720 aaPredicted RBP14.89□□□□□ -0.03
RABGGTA-217ENST00000560521 PLXNC1O60486 1568 aa14.87□□□□□ -0.03
RABGGTA-217ENST00000560521 PTPRKQ15262 1439 aa14.87□□□□□ -0.03
RABGGTA-217ENST00000560521 SYCP2Q9BX26 1530 aa14.87□□□□□ -0.03
RABGGTA-217ENST00000560521 DNMT1P26358 1616 aaKnown RBP14.86□□□□□ -0.03
RABGGTA-217ENST00000560521 ATP7AQ04656 1500 aa14.86□□□□□ -0.03
RABGGTA-217ENST00000560521 CCDC18Q5T9S5 1454 aa14.85□□□□□ -0.03
RABGGTA-217ENST00000560521 HSPA1LP34931 641 aa14.85□□□□□ -0.03
RABGGTA-217ENST00000560521 ZNF777Q9ULD5 760 aaPredicted RBP14.85□□□□□ -0.03
RABGGTA-217ENST00000560521 INO80Q9ULG1 1556 aaPredicted RBP14.85□□□□□ -0.03
RABGGTA-217ENST00000560521 ADGBQ8N7X0 1667 aa14.84□□□□□ -0.03
RABGGTA-217ENST00000560521 HNRNPMP52272 730 aaKnown RBP eCLIP14.84□□□□□ -0.03
RABGGTA-217ENST00000560521 PPP6R1Q9UPN7 881 aa14.84□□□□□ -0.03
RABGGTA-217ENST00000560521 SPAG9O60271 1321 aaKnown RBP14.84□□□□□ -0.03
RABGGTA-217ENST00000560521 CASKIN1Q8WXD9 1431 aa14.83□□□□□ -0.03
RABGGTA-217ENST00000560521 GPATCH8Q9UKJ3 1502 aaKnown RBP14.82□□□□□ -0.04
RABGGTA-217ENST00000560521 A2MP01023 1474 aa14.82□□□□□ -0.04
RABGGTA-217ENST00000560521 PIP4K2BP78356 416 aa14.81□□□□□ -0.04
RABGGTA-217ENST00000560521 GGT6Q6P531 493 aa14.81□□□□□ -0.04
RABGGTA-217ENST00000560521 NEURL4Q96JN8 1562 aa14.81□□□□□ -0.04
RABGGTA-217ENST00000560521 SCAF1Q9H7N4 1312 aaKnown RBP14.8□□□□□ -0.04
RABGGTA-217ENST00000560521 A2ML1A8K2U0 1454 aa14.8□□□□□ -0.04
RABGGTA-217ENST00000560521 CPS1P31327 1500 aa14.79□□□□□ -0.04
RABGGTA-217ENST00000560521 ALKQ9UM73 1620 aa14.78□□□□□ -0.04
RABGGTA-217ENST00000560521 TOM1O60784 492 aa14.78□□□□□ -0.04
RABGGTA-217ENST00000560521 SHANK2Q9UPX8 1470 aa14.77□□□□□ -0.04
RABGGTA-217ENST00000560521 KIAA1107Q9UPP5 1409 aa14.77□□□□□ -0.04
RABGGTA-217ENST00000560521 STRCP1A6NGW2 1772 aa14.77□□□□□ -0.05
RABGGTA-217ENST00000560521 VWDEQ8N2E2 1590 aa14.75□□□□□ -0.05
RABGGTA-217ENST00000560521 PLEKHH2Q8IVE3 1493 aa14.74□□□□□ -0.05
RABGGTA-217ENST00000560521 FYCO1Q9BQS8 1478 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms