RNA–Protein interactions for RNA: ENST00000559591.5

KNSTRN-207, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 2

Gene KNSTRN, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-207ENST00000559591 PIP4K2BP78356 416 aa17.26■□□□□ 0.35
KNSTRN-207ENST00000559591 POTEHQ6S545 545 aa17.26■□□□□ 0.35
KNSTRN-207ENST00000559591 SIGLEC1Q9BZZ2 1709 aa17.25■□□□□ 0.35
KNSTRN-207ENST00000559591 CEBPAP49715 358 aaPredicted RBP17.25■□□□□ 0.35
KNSTRN-207ENST00000559591 AKNAQ7Z591 1439 aa17.23■□□□□ 0.35
KNSTRN-207ENST00000559591 NEO1Q92859 1461 aa17.23■□□□□ 0.35
KNSTRN-207ENST00000559591 ZNF335Q9H4Z2 1342 aaPredicted RBP17.22■□□□□ 0.35
KNSTRN-207ENST00000559591 CAPN15O75808 1086 aa17.21■□□□□ 0.35
KNSTRN-207ENST00000559591 U3KPZ7 1027 aaPredicted RBP17.2■□□□□ 0.34
KNSTRN-207ENST00000559591 IGF1RP08069 1367 aa17.18■□□□□ 0.34
KNSTRN-207ENST00000559591 RGS17Q9UGC6 210 aaPredicted RBP17.18■□□□□ 0.34
KNSTRN-207ENST00000559591 NCOA1Q15788 1441 aa17.18■□□□□ 0.34
KNSTRN-207ENST00000559591 ARHGEF12Q9NZN5 1544 aa17.16■□□□□ 0.34
KNSTRN-207ENST00000559591 ABCA9Q8IUA7 1624 aa17.16■□□□□ 0.34
KNSTRN-207ENST00000559591 KIAA0556O60303 1618 aa17.15■□□□□ 0.34
KNSTRN-207ENST00000559591 SRCAPQ6ZRS2 3230 aa17.15■□□□□ 0.34
KNSTRN-207ENST00000559591 DSG3P32926 999 aa17.14■□□□□ 0.33
KNSTRN-207ENST00000559591 RICTORQ6R327 1708 aa17.13■□□□□ 0.33
KNSTRN-207ENST00000559591 ZFYVE16Q7Z3T8 1539 aa17.13■□□□□ 0.33
KNSTRN-207ENST00000559591 SPINK5Q9NQ38 1064 aaPredicted RBP17.13■□□□□ 0.33
KNSTRN-207ENST00000559591 DENND4BO75064 1496 aaPredicted RBP17.12■□□□□ 0.33
KNSTRN-207ENST00000559591 SETD1BQ9UPS6 1966 aaKnown RBP17.12■□□□□ 0.33
KNSTRN-207ENST00000559591 EFCAB5A4FU69 1503 aa17.11■□□□□ 0.33
KNSTRN-207ENST00000559591 TOM1O60784 492 aa17.11■□□□□ 0.33
KNSTRN-207ENST00000559591 UGGT2Q9NYU1 1516 aa17.1■□□□□ 0.33
KNSTRN-207ENST00000559591 FHOD3Q2V2M9 1422 aa17.08■□□□□ 0.32
KNSTRN-207ENST00000559591 ABCA8O94911 1581 aa17.07■□□□□ 0.32
KNSTRN-207ENST00000559591 SETD1AO15047 1707 aaKnown RBP17.07■□□□□ 0.32
KNSTRN-207ENST00000559591 ZMYM4Q5VZL5 1548 aa17.06■□□□□ 0.32
KNSTRN-207ENST00000559591 CARMIL1Q5VZK9 1371 aa17.05■□□□□ 0.32
KNSTRN-207ENST00000559591 POTEAQ6S8J7 498 aa17.04■□□□□ 0.32
KNSTRN-207ENST00000559591 CAMSAP1Q5T5Y3 1602 aa17.03■□□□□ 0.32
KNSTRN-207ENST00000559591 NCKAP5LQ9HCH0 1330 aa17.02■□□□□ 0.32
KNSTRN-207ENST00000559591 ARID3CA6NKF2 412 aa17.01■□□□□ 0.31
KNSTRN-207ENST00000559591 KIF27Q86VH2 1401 aa17.01■□□□□ 0.31
KNSTRN-207ENST00000559591 MAGI2Q86UL8 1455 aa17■□□□□ 0.31
KNSTRN-207ENST00000559591 C3P01024 1663 aa16.97■□□□□ 0.31
KNSTRN-207ENST00000559591 TRAPPC8Q9Y2L5 1435 aa16.96■□□□□ 0.31
KNSTRN-207ENST00000559591 C9orf84Q5VXU9 1444 aa16.96■□□□□ 0.3
KNSTRN-207ENST00000559591 HECW1Q76N89 1606 aa16.95■□□□□ 0.3
KNSTRN-207ENST00000559591 ZEB1P37275 1124 aaPredicted RBP16.94■□□□□ 0.3
KNSTRN-207ENST00000559591 UPF1Q92900 1129 aaKnown RBP eCLIP16.94■□□□□ 0.3
KNSTRN-207ENST00000559591 ATP10AO60312 1499 aa16.93■□□□□ 0.3
KNSTRN-207ENST00000559591 ATP10BO94823 1461 aa16.92■□□□□ 0.3
KNSTRN-207ENST00000559591 CFAP74Q9C0B2 1584 aa16.91■□□□□ 0.3
KNSTRN-207ENST00000559591 PTPRKQ15262 1439 aa16.91■□□□□ 0.3
KNSTRN-207ENST00000559591 ALKQ9UM73 1620 aa16.9■□□□□ 0.3
KNSTRN-207ENST00000559591 PKD2Q13563 968 aa16.89■□□□□ 0.29
KNSTRN-207ENST00000559591 CPS1P31327 1500 aa16.89■□□□□ 0.29
KNSTRN-207ENST00000559591 PLA2R1Q13018 1463 aa16.85■□□□□ 0.29
KNSTRN-207ENST00000559591 GOLGA3Q08378 1498 aa16.83■□□□□ 0.28
KNSTRN-207ENST00000559591 TRIM26Q12899 539 aaPredicted RBP16.83■□□□□ 0.28
KNSTRN-207ENST00000559591 TCOF1Q13428 1488 aaKnown RBP16.83■□□□□ 0.28
KNSTRN-207ENST00000559591 ESF1Q9H501 851 aaKnown RBP16.82■□□□□ 0.28
KNSTRN-207ENST00000559591 APLP2Q06481 763 aa16.8■□□□□ 0.28
KNSTRN-207ENST00000559591 SHANK2Q9UPX8 1470 aa16.8■□□□□ 0.28
KNSTRN-207ENST00000559591 RAPGEF2Q9Y4G8 1499 aa16.8■□□□□ 0.28
KNSTRN-207ENST00000559591 PCGF6Q9BYE7 350 aa16.78■□□□□ 0.28
KNSTRN-207ENST00000559591 SUPT6HQ7KZ85 1726 aaKnown RBP16.78■□□□□ 0.28
KNSTRN-207ENST00000559591 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.77■□□□□ 0.28
KNSTRN-207ENST00000559591 HNRNPUL2Q1KMD3 747 aaKnown RBP16.77■□□□□ 0.28
KNSTRN-207ENST00000559591 PELP1Q8IZL8 1130 aaKnown RBP16.76■□□□□ 0.27
KNSTRN-207ENST00000559591 SCAPERQ9BY12 1400 aa16.76■□□□□ 0.27
KNSTRN-207ENST00000559591 NPATQ14207 1427 aa16.75■□□□□ 0.27
KNSTRN-207ENST00000559591 ZNF219Q9P2Y4 722 aaPredicted RBP16.74■□□□□ 0.27
KNSTRN-207ENST00000559591 ZNF142P52746 1687 aaPredicted RBP16.73■□□□□ 0.27
KNSTRN-207ENST00000559591 ABCB7O75027 752 aa16.73■□□□□ 0.27
KNSTRN-207ENST00000559591 FAM9AQ8IZU1 332 aaPredicted RBP16.72■□□□□ 0.27
KNSTRN-207ENST00000559591 CNTLNQ9NXG0 1405 aa16.7■□□□□ 0.26
KNSTRN-207ENST00000559591 MYO3AQ8NEV4 1616 aa16.7■□□□□ 0.26
KNSTRN-207ENST00000559591 CEP170BQ9Y4F5 1589 aaPredicted RBP16.7■□□□□ 0.26
KNSTRN-207ENST00000559591 SLC4A2P04920 1241 aa16.68■□□□□ 0.26
KNSTRN-207ENST00000559591 TRIM52Q96A61 297 aa16.68■□□□□ 0.26
KNSTRN-207ENST00000559591 AGLP35573 1532 aa16.68■□□□□ 0.26
KNSTRN-207ENST00000559591 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.68■□□□□ 0.267e-7■■□□□ 13.6
KNSTRN-207ENST00000559591 RNF17Q9BXT8 1623 aaKnown RBP16.67■□□□□ 0.26
KNSTRN-207ENST00000559591 CTTNBP2Q8WZ74 1663 aa16.67■□□□□ 0.26
KNSTRN-207ENST00000559591 IFFO2Q5TF58 517 aa16.67■□□□□ 0.26
KNSTRN-207ENST00000559591 REREQ9P2R6 1566 aa16.65■□□□□ 0.26
KNSTRN-207ENST00000559591 VWDEQ8N2E2 1590 aa16.64■□□□□ 0.25
KNSTRN-207ENST00000559591 DIP2CQ9Y2E4 1556 aa16.64■□□□□ 0.25
KNSTRN-207ENST00000559591 MYT1LQ9UL68 1186 aa16.64■□□□□ 0.25
KNSTRN-207ENST00000559591 LRRC7Q96NW7 1537 aa16.63■□□□□ 0.25
KNSTRN-207ENST00000559591 MROH2AA6NES4 1674 aa16.62■□□□□ 0.25
KNSTRN-207ENST00000559591 NEURL4Q96JN8 1562 aa16.61■□□□□ 0.25
KNSTRN-207ENST00000559591 RAPGEF6Q8TEU7 1601 aa16.61■□□□□ 0.25
KNSTRN-207ENST00000559591 POLR1AO95602 1720 aaPredicted RBP16.61■□□□□ 0.25
KNSTRN-207ENST00000559591 ZMYM3Q14202 1370 aa16.6■□□□□ 0.25
KNSTRN-207ENST00000559591 P3H3Q8IVL6 736 aa16.59■□□□□ 0.25
KNSTRN-207ENST00000559591 ZNF518AQ6AHZ1 1483 aa16.59■□□□□ 0.25
KNSTRN-207ENST00000559591 PLEKHD1A6NEE1 506 aa16.58■□□□□ 0.24
KNSTRN-207ENST00000559591 ABCA6Q8N139 1617 aa16.57■□□□□ 0.24
KNSTRN-207ENST00000559591 KDM5CP41229 1560 aa16.56■□□□□ 0.24
KNSTRN-207ENST00000559591 SETBP1Q9Y6X0 1596 aa16.55■□□□□ 0.24
KNSTRN-207ENST00000559591 KCNA4P22459 653 aa16.55■□□□□ 0.24
KNSTRN-207ENST00000559591 RBM33Q96EV2 1170 aaKnown RBP16.55■□□□□ 0.24
KNSTRN-207ENST00000559591 ZRANB1Q9UGI0 708 aa16.55■□□□□ 0.24
KNSTRN-207ENST00000559591 NUP153P49790 1475 aaKnown RBP16.54■□□□□ 0.24
KNSTRN-207ENST00000559591 AFAP1Q8N556 730 aa16.54■□□□□ 0.24
KNSTRN-207ENST00000559591 PLCH2O75038 1416 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms