RNA–Protein interactions for RNA: ENST00000559289.1

SHC4-206, Transcript of SHC adaptor protein 4, humanhuman

TSL 3

Gene SHC4, Length 864 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4-206ENST00000559289 MYO5CQ9NQX4 1742 aa9.3□□□□□ -0.92
SHC4-206ENST00000559289 PREX2Q70Z35 1606 aa9.3□□□□□ -0.92
SHC4-206ENST00000559289 APLP2Q06481 763 aa9.29□□□□□ -0.92
SHC4-206ENST00000559289 GPATCH8Q9UKJ3 1502 aaKnown RBP9.28□□□□□ -0.92
SHC4-206ENST00000559289 PPARGC1BQ86YN6 1023 aaKnown RBP9.28□□□□□ -0.92
SHC4-206ENST00000559289 CD109Q6YHK3 1445 aa9.28□□□□□ -0.92
SHC4-206ENST00000559289 PHLDB1Q86UU1 1377 aa9.27□□□□□ -0.93
SHC4-206ENST00000559289 ARAP3Q8WWN8 1544 aa9.27□□□□□ -0.93
SHC4-206ENST00000559289 TRHP20396 242 aaPredicted RBP9.27□□□□□ -0.93
SHC4-206ENST00000559289 PLCH2O75038 1416 aa9.27□□□□□ -0.93
SHC4-206ENST00000559289 ITSN2Q9NZM3 1697 aa9.26□□□□□ -0.93
SHC4-206ENST00000559289 MAPK8IP2Q13387 824 aaPredicted RBP9.26□□□□□ -0.93
SHC4-206ENST00000559289 CCNB3Q8WWL7 1395 aa9.24□□□□□ -0.93
SHC4-206ENST00000559289 SAMD9LQ8IVG5 1584 aa9.24□□□□□ -0.93
SHC4-206ENST00000559289 MYOM3Q5VTT5 1437 aa9.24□□□□□ -0.93
SHC4-206ENST00000559289 FANCAO15360 1455 aa9.23□□□□□ -0.93
SHC4-206ENST00000559289 ARHGAP5Q13017 1502 aa9.23□□□□□ -0.93
SHC4-206ENST00000559289 CFAP74Q9C0B2 1584 aa9.23□□□□□ -0.93
SHC4-206ENST00000559289 NEO1Q92859 1461 aa9.22□□□□□ -0.93
SHC4-206ENST00000559289 FGD6Q6ZV73 1430 aa9.22□□□□□ -0.93
SHC4-206ENST00000559289 TEX14Q8IWB6 1497 aa9.21□□□□□ -0.93
SHC4-206ENST00000559289 COL17A1Q9UMD9 1497 aaPredicted RBP9.21□□□□□ -0.93
SHC4-206ENST00000559289 ABCC1P33527 1531 aa9.21□□□□□ -0.93
SHC4-206ENST00000559289 ARHGEF12Q9NZN5 1544 aa9.21□□□□□ -0.93
SHC4-206ENST00000559289 PTPN23Q9H3S7 1636 aa9.21□□□□□ -0.93
SHC4-206ENST00000559289 AKNAQ7Z591 1439 aa9.21□□□□□ -0.94
SHC4-206ENST00000559289 MIA2Q96PC5 1412 aa9.21□□□□□ -0.94
SHC4-206ENST00000559289 CFDP1Q9UEE9 299 aaPredicted RBP9.2□□□□□ -0.94
SHC4-206ENST00000559289 ZNF644Q9H582 1327 aaPredicted RBP9.2□□□□□ -0.94
SHC4-206ENST00000559289 CAMSAP2Q08AD1 1489 aa9.2□□□□□ -0.94
SHC4-206ENST00000559289 TCOF1Q13428 1488 aaKnown RBP9.2□□□□□ -0.94
SHC4-206ENST00000559289 FRMPD1Q5SYB0 1578 aa9.2□□□□□ -0.94
SHC4-206ENST00000559289 RICTORQ6R327 1708 aa9.19□□□□□ -0.94
SHC4-206ENST00000559289 EFCAB2Q5VUJ9 269 aa9.19□□□□□ -0.94
SHC4-206ENST00000559289 MBD5Q9P267 1494 aa9.19□□□□□ -0.94
SHC4-206ENST00000559289 SYCP2Q9BX26 1530 aa9.19□□□□□ -0.94
SHC4-206ENST00000559289 ADGRL1O94910 1474 aa9.18□□□□□ -0.94
SHC4-206ENST00000559289 RRBP1Q9P2E9 1410 aaKnown RBP9.18□□□□□ -0.94
SHC4-206ENST00000559289 SCAPERQ9BY12 1400 aa9.17□□□□□ -0.94
SHC4-206ENST00000559289 KIAA1107Q9UPP5 1409 aa9.17□□□□□ -0.94
SHC4-206ENST00000559289 TRAPPC8Q9Y2L5 1435 aa9.17□□□□□ -0.94
SHC4-206ENST00000559289 ZNF777Q9ULD5 760 aaPredicted RBP9.17□□□□□ -0.94
SHC4-206ENST00000559289 KDM6BO15054 1643 aa9.16□□□□□ -0.94
SHC4-206ENST00000559289 ARHGEF5Q12774 1597 aa9.16□□□□□ -0.94
SHC4-206ENST00000559289 SCAF1Q9H7N4 1312 aaKnown RBP9.16□□□□□ -0.94
SHC4-206ENST00000559289 KDM5CP41229 1560 aa9.16□□□□□ -0.94
SHC4-206ENST00000559289 DENND4BO75064 1496 aaPredicted RBP9.15□□□□□ -0.94
SHC4-206ENST00000559289 PLEKHH2Q8IVE3 1493 aa9.15□□□□□ -0.94
SHC4-206ENST00000559289 POGZQ7Z3K3 1410 aa9.15□□□□□ -0.94
SHC4-206ENST00000559289 HNRNPMP52272 730 aaKnown RBP eCLIP9.15□□□□□ -0.94
SHC4-206ENST00000559289 CROCC2H7BZ55 1655 aa9.15□□□□□ -0.94
SHC4-206ENST00000559289 DNMT1P26358 1616 aaKnown RBP9.15□□□□□ -0.94
SHC4-206ENST00000559289 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.14□□□□□ -0.95
SHC4-206ENST00000559289 RAPGEF3O95398 923 aa9.14□□□□□ -0.95
SHC4-206ENST00000559289 ZMYM4Q5VZL5 1548 aa9.14□□□□□ -0.95
SHC4-206ENST00000559289 AFAP1Q8N556 730 aa9.13□□□□□ -0.95
SHC4-206ENST00000559289 KIDINS220Q9ULH0 1771 aa9.13□□□□□ -0.95
SHC4-206ENST00000559289 ZNF518AQ6AHZ1 1483 aa9.13□□□□□ -0.95
SHC4-206ENST00000559289 CCDC141Q6ZP82 1450 aa9.13□□□□□ -0.95
SHC4-206ENST00000559289 ABCC5O15440 1437 aa9.13□□□□□ -0.95
SHC4-206ENST00000559289 PTPRKQ15262 1439 aa9.13□□□□□ -0.95
SHC4-206ENST00000559289 INO80Q9ULG1 1556 aaPredicted RBP9.12□□□□□ -0.95
SHC4-206ENST00000559289 DCAF8L1A6NGE4 600 aa9.12□□□□□ -0.95
SHC4-206ENST00000559289 DAPK1P53355 1430 aa9.12□□□□□ -0.95
SHC4-206ENST00000559289 HECW2Q9P2P5 1572 aa9.12□□□□□ -0.95
SHC4-206ENST00000559289 MAST1Q9Y2H9 1570 aa9.12□□□□□ -0.95
SHC4-206ENST00000559289 ZFYVE16Q7Z3T8 1539 aa9.11□□□□□ -0.95
SHC4-206ENST00000559289 FAM50AQ14320 339 aaKnown RBP9.11□□□□□ -0.95
SHC4-206ENST00000559289 RNF39Q9H2S5 420 aa9.11□□□□□ -0.95
SHC4-206ENST00000559289 MLH3Q9UHC1 1453 aa9.1□□□□□ -0.95
SHC4-206ENST00000559289 SHANK2Q9UPX8 1470 aa9.1□□□□□ -0.95
SHC4-206ENST00000559289 ATP7AQ04656 1500 aa9.1□□□□□ -0.95
SHC4-206ENST00000559289 ABCA6Q8N139 1617 aa9.09□□□□□ -0.95
SHC4-206ENST00000559289 SIGLEC1Q9BZZ2 1709 aa9.09□□□□□ -0.95
SHC4-206ENST00000559289 DIP2CQ9Y2E4 1556 aa9.09□□□□□ -0.95
SHC4-206ENST00000559289 YEATS2Q9ULM3 1422 aa9.09□□□□□ -0.95
SHC4-206ENST00000559289 RSPH4AQ5TD94 716 aa9.09□□□□□ -0.95
SHC4-206ENST00000559289 ADGBQ8N7X0 1667 aa9.09□□□□□ -0.95
SHC4-206ENST00000559289 ARHGEF40Q8TER5 1519 aa9.09□□□□□ -0.95
SHC4-206ENST00000559289 RTEL1-TNFRSF6BF6WH68 1400 aa9.08□□□□□ -0.96
SHC4-206ENST00000559289 C9orf84Q5VXU9 1444 aa9.08□□□□□ -0.96
SHC4-206ENST00000559289 ADGRL2O95490 1459 aa9.08□□□□□ -0.96
SHC4-206ENST00000559289 MAGI2Q86UL8 1455 aa9.08□□□□□ -0.96
SHC4-206ENST00000559289 PLXNC1O60486 1568 aa9.07□□□□□ -0.96
SHC4-206ENST00000559289 SPAG9O60271 1321 aaKnown RBP9.06□□□□□ -0.96
SHC4-206ENST00000559289 POTEHQ6S545 545 aa9.06□□□□□ -0.96
SHC4-206ENST00000559289 NCOA1Q15788 1441 aa9.05□□□□□ -0.96
SHC4-206ENST00000559289 REREQ9P2R6 1566 aa9.05□□□□□ -0.96
SHC4-206ENST00000559289 CHIC2Q9UKJ5 165 aa9.05□□□□□ -0.96
SHC4-206ENST00000559289 TSPY4P0CV99 314 aa9.04□□□□□ -0.96
SHC4-206ENST00000559289 TSPY10P0CW01 314 aa9.04□□□□□ -0.96
SHC4-206ENST00000559289 ITGAEP38570 1179 aa9.04□□□□□ -0.96
SHC4-206ENST00000559289 ATP10AO60312 1499 aa9.03□□□□□ -0.96
SHC4-206ENST00000559289 ROCK1Q13464 1354 aa9.03□□□□□ -0.96
SHC4-206ENST00000559289 GCC2Q8IWJ2 1684 aa9.03□□□□□ -0.96
SHC4-206ENST00000559289 BCORL1Q5H9F3 1711 aa9.02□□□□□ -0.96
SHC4-206ENST00000559289 A2MP01023 1474 aa9.02□□□□□ -0.96
SHC4-206ENST00000559289 KIF15Q9NS87 1388 aa9.02□□□□□ -0.97
SHC4-206ENST00000559289 ANKRD30AQ9BXX3 1397 aa9.01□□□□□ -0.97
SHC4-206ENST00000559289 DUOX2Q9NRD8 1548 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms