RNA–Protein interactions for RNA: ENST00000558941.5

PCAT29-202, prostate cancer associated transcript 29, humanhuman

TSL 4 BASIC

Gene PCAT29, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-202ENST00000558941 EFCAB5A4FU69 1503 aa14.07□□□□□ -0.16
PCAT29-202ENST00000558941 CAMSAP1Q5T5Y3 1602 aa14.06□□□□□ -0.16
PCAT29-202ENST00000558941 SCAF1Q9H7N4 1312 aaKnown RBP14.06□□□□□ -0.16
PCAT29-202ENST00000558941 DENND4BO75064 1496 aaPredicted RBP14.06□□□□□ -0.16
PCAT29-202ENST00000558941 POTEAQ6S8J7 498 aa14.05□□□□□ -0.16
PCAT29-202ENST00000558941 HECW1Q76N89 1606 aa14.03□□□□□ -0.16
PCAT29-202ENST00000558941 NCKAP5LQ9HCH0 1330 aa13.98□□□□□ -0.17
PCAT29-202ENST00000558941 ATP10BO94823 1461 aa13.98□□□□□ -0.17
PCAT29-202ENST00000558941 MAGI2Q86UL8 1455 aa13.98□□□□□ -0.17
PCAT29-202ENST00000558941 CARMIL1Q5VZK9 1371 aa13.97□□□□□ -0.17
PCAT29-202ENST00000558941 TCOF1Q13428 1488 aaKnown RBP13.93□□□□□ -0.18
PCAT29-202ENST00000558941 TOM1O60784 492 aa13.93□□□□□ -0.18
PCAT29-202ENST00000558941 UPF1Q92900 1129 aaKnown RBP eCLIP13.93□□□□□ -0.18
PCAT29-202ENST00000558941 C9orf84Q5VXU9 1444 aa13.92□□□□□ -0.18
PCAT29-202ENST00000558941 KIF27Q86VH2 1401 aa13.92□□□□□ -0.18
PCAT29-202ENST00000558941 TRAPPC8Q9Y2L5 1435 aa13.92□□□□□ -0.18
PCAT29-202ENST00000558941 ATP10AO60312 1499 aa13.92□□□□□ -0.18
PCAT29-202ENST00000558941 CFAP74Q9C0B2 1584 aa13.91□□□□□ -0.18
PCAT29-202ENST00000558941 ARID3CA6NKF2 412 aa13.9□□□□□ -0.18
PCAT29-202ENST00000558941 ZNF142P52746 1687 aaPredicted RBP13.9□□□□□ -0.18
PCAT29-202ENST00000558941 CPS1P31327 1500 aa13.9□□□□□ -0.19
PCAT29-202ENST00000558941 SENP3Q9H4L4 574 aaPredicted RBP13.89□□□□□ -0.19
PCAT29-202ENST00000558941 PLA2R1Q13018 1463 aa13.88□□□□□ -0.19
PCAT29-202ENST00000558941 RAPGEF2Q9Y4G8 1499 aa13.87□□□□□ -0.19
PCAT29-202ENST00000558941 SUPT6HQ7KZ85 1726 aaKnown RBP13.87□□□□□ -0.19
PCAT29-202ENST00000558941 MYO3AQ8NEV4 1616 aa13.85□□□□□ -0.19
PCAT29-202ENST00000558941 PTPRKQ15262 1439 aa13.83□□□□□ -0.2
PCAT29-202ENST00000558941 NEURL4Q96JN8 1562 aa13.83□□□□□ -0.2
PCAT29-202ENST00000558941 CTTNBP2Q8WZ74 1663 aa13.82□□□□□ -0.2
PCAT29-202ENST00000558941 SHANK2Q9UPX8 1470 aa13.82□□□□□ -0.2
PCAT29-202ENST00000558941 VWDEQ8N2E2 1590 aa13.82□□□□□ -0.2
PCAT29-202ENST00000558941 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.8□□□□□ -0.2
PCAT29-202ENST00000558941 DIP2CQ9Y2E4 1556 aa13.8□□□□□ -0.2
PCAT29-202ENST00000558941 PPP6R1Q9UPN7 881 aa13.8□□□□□ -0.2
PCAT29-202ENST00000558941 REREQ9P2R6 1566 aa13.79□□□□□ -0.2
PCAT29-202ENST00000558941 CEP170BQ9Y4F5 1589 aaPredicted RBP13.79□□□□□ -0.2
PCAT29-202ENST00000558941 STRCP1A6NGW2 1772 aa13.79□□□□□ -0.2
PCAT29-202ENST00000558941 POLR1AO95602 1720 aaPredicted RBP13.78□□□□□ -0.2
PCAT29-202ENST00000558941 PKD2Q13563 968 aa13.78□□□□□ -0.2
PCAT29-202ENST00000558941 RNF17Q9BXT8 1623 aaKnown RBP13.78□□□□□ -0.2
PCAT29-202ENST00000558941 MROH2AA6NES4 1674 aa13.77□□□□□ -0.21
PCAT29-202ENST00000558941 AGLP35573 1532 aa13.77□□□□□ -0.21
PCAT29-202ENST00000558941 NPATQ14207 1427 aa13.77□□□□□ -0.21
PCAT29-202ENST00000558941 ABCA6Q8N139 1617 aa13.76□□□□□ -0.21
PCAT29-202ENST00000558941 GOLGA3Q08378 1498 aa13.76□□□□□ -0.21
PCAT29-202ENST00000558941 SCAPERQ9BY12 1400 aa13.76□□□□□ -0.21
PCAT29-202ENST00000558941 SETBP1Q9Y6X0 1596 aa13.75□□□□□ -0.21
PCAT29-202ENST00000558941 LRRC7Q96NW7 1537 aa13.74□□□□□ -0.21
PCAT29-202ENST00000558941 KDM5CP41229 1560 aa13.73□□□□□ -0.21
PCAT29-202ENST00000558941 RAPGEF6Q8TEU7 1601 aa13.72□□□□□ -0.21
PCAT29-202ENST00000558941 DNMT1P26358 1616 aaKnown RBP13.69□□□□□ -0.22
PCAT29-202ENST00000558941 NUP153P49790 1475 aaKnown RBP13.68□□□□□ -0.22
PCAT29-202ENST00000558941 IFFO2Q5TF58 517 aa13.68□□□□□ -0.22
PCAT29-202ENST00000558941 XIRP1Q702N8 1843 aaKnown RBP13.68□□□□□ -0.22
PCAT29-202ENST00000558941 CNTLNQ9NXG0 1405 aa13.67□□□□□ -0.22
PCAT29-202ENST00000558941 SYNMO15061 1565 aa13.66□□□□□ -0.22
PCAT29-202ENST00000558941 SUPT5HO00267 1087 aaKnown RBP13.65□□□□□ -0.22
PCAT29-202ENST00000558941 CLTCQ00610 1675 aaKnown RBP13.63□□□□□ -0.23
PCAT29-202ENST00000558941 ZNF518AQ6AHZ1 1483 aa13.62□□□□□ -0.23
PCAT29-202ENST00000558941 ZMYM3Q14202 1370 aa13.62□□□□□ -0.23
PCAT29-202ENST00000558941 TRIM52Q96A61 297 aa13.62□□□□□ -0.23
PCAT29-202ENST00000558941 PLCH2O75038 1416 aa13.61□□□□□ -0.23
PCAT29-202ENST00000558941 A2ML1A8K2U0 1454 aa13.59□□□□□ -0.23
PCAT29-202ENST00000558941 LRP6O75581 1613 aa13.58□□□□□ -0.24
PCAT29-202ENST00000558941 AFAP1Q8N556 730 aa13.58□□□□□ -0.24
PCAT29-202ENST00000558941 EP400Q96L91 3159 aa13.58□□□□□ -0.24
PCAT29-202ENST00000558941 ROBO1Q9Y6N7 1651 aa13.57□□□□□ -0.24
PCAT29-202ENST00000558941 SAMD9Q5K651 1589 aa13.57□□□□□ -0.24
PCAT29-202ENST00000558941 MYO5CQ9NQX4 1742 aa13.56□□□□□ -0.24
PCAT29-202ENST00000558941 MLH3Q9UHC1 1453 aa13.56□□□□□ -0.24
PCAT29-202ENST00000558941 KIDINS220Q9ULH0 1771 aa13.56□□□□□ -0.24
PCAT29-202ENST00000558941 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.56□□□□□ -0.24
PCAT29-202ENST00000558941 HNRNPUL2Q1KMD3 747 aaKnown RBP13.56□□□□□ -0.24
PCAT29-202ENST00000558941 ESF1Q9H501 851 aaKnown RBP13.56□□□□□ -0.24
PCAT29-202ENST00000558941 FAM135BQ49AJ0 1406 aa13.56□□□□□ -0.24
PCAT29-202ENST00000558941 P3H3Q8IVL6 736 aa13.55□□□□□ -0.24
PCAT29-202ENST00000558941 IQGAP1P46940 1657 aa13.55□□□□□ -0.24
PCAT29-202ENST00000558941 MED14O60244 1454 aa13.55□□□□□ -0.24
PCAT29-202ENST00000558941 CDK12Q9NYV4 1490 aaPredicted RBP13.55□□□□□ -0.24
PCAT29-202ENST00000558941 DEPDC5O75140 1603 aa13.53□□□□□ -0.24
PCAT29-202ENST00000558941 CDK13Q14004 1512 aaKnown RBP13.53□□□□□ -0.24
PCAT29-202ENST00000558941 LRP5O75197 1615 aa13.53□□□□□ -0.24
PCAT29-202ENST00000558941 ITSN2Q9NZM3 1697 aa13.53□□□□□ -0.24
PCAT29-202ENST00000558941 ZC3H13Q5T200 1668 aaKnown RBP13.51□□□□□ -0.25
PCAT29-202ENST00000558941 NPHP4O75161 1426 aaPredicted RBP13.5□□□□□ -0.25
PCAT29-202ENST00000558941 RBM33Q96EV2 1170 aaKnown RBP13.49□□□□□ -0.25
PCAT29-202ENST00000558941 RGS12O14924 1447 aa13.48□□□□□ -0.25
PCAT29-202ENST00000558941 PLEKHD1A6NEE1 506 aa13.48□□□□□ -0.25
PCAT29-202ENST00000558941 ABCC1P33527 1531 aa13.48□□□□□ -0.25
PCAT29-202ENST00000558941 PHLPP1O60346 1717 aa13.47□□□□□ -0.25
PCAT29-202ENST00000558941 ZRANB1Q9UGI0 708 aa13.46□□□□□ -0.25
PCAT29-202ENST00000558941 COL16A1Q07092 1604 aaPredicted RBP13.46□□□□□ -0.26
PCAT29-202ENST00000558941 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.45□□□□□ -0.26
PCAT29-202ENST00000558941 KIF14Q15058 1648 aa13.44□□□□□ -0.26
PCAT29-202ENST00000558941 PLXNC1O60486 1568 aa13.43□□□□□ -0.26
PCAT29-202ENST00000558941 RXRBP28702 533 aa13.43□□□□□ -0.26
PCAT29-202ENST00000558941 CDC42BPBQ9Y5S2 1711 aa13.42□□□□□ -0.26
PCAT29-202ENST00000558941 EFCAB2Q5VUJ9 269 aa13.42□□□□□ -0.26
PCAT29-202ENST00000558941 ZNF772Q68DY9 489 aaPredicted RBP13.42□□□□□ -0.26
PCAT29-202ENST00000558941 JCADQ9P266 1359 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms