RNA–Protein interactions for RNA: ENST00000558880.1

TRAF3-206, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-206ENST00000558880 CEP170Q5SW79 1584 aa11.96□□□□□ -0.5
TRAF3-206ENST00000558880 KIF13AQ9H1H9 1805 aa11.95□□□□□ -0.5
TRAF3-206ENST00000558880 LOC105371045A0A1W2PR82 267 aa11.95□□□□□ -0.5
TRAF3-206ENST00000558880 ZNF579Q8NAF0 562 aaKnown RBP11.94□□□□□ -0.5
TRAF3-206ENST00000558880 ERCC6L2Q5T890 1561 aa11.93□□□□□ -0.5
TRAF3-206ENST00000558880 KDM4FA0A1W2PPD8 638 aa11.93□□□□□ -0.5
TRAF3-206ENST00000558880 CCDC61Q9Y6R9 512 aa11.92□□□□□ -0.5
TRAF3-206ENST00000558880 GOLGA3Q08378 1498 aa11.91□□□□□ -0.5
TRAF3-206ENST00000558880 CIZ1Q9ULV3 898 aaPredicted RBP11.9□□□□□ -0.5
TRAF3-206ENST00000558880 KIAA0586Q9BVV6 1533 aa11.9□□□□□ -0.5
TRAF3-206ENST00000558880 GABBR2O75899 941 aa11.89□□□□□ -0.51
TRAF3-206ENST00000558880 TNIKQ9UKE5 1360 aa11.86□□□□□ -0.51
TRAF3-206ENST00000558880 PYGBP11216 843 aa11.85□□□□□ -0.51
TRAF3-206ENST00000558880 GSE1Q14687 1217 aa11.85□□□□□ -0.51
TRAF3-206ENST00000558880 FAM69CQ0P6D2 419 aa11.84□□□□□ -0.51
TRAF3-206ENST00000558880 JPH4Q96JJ6 628 aa11.84□□□□□ -0.51
TRAF3-206ENST00000558880 GALR2O43603 387 aaPredicted RBP11.83□□□□□ -0.52
TRAF3-206ENST00000558880 SHROOM2Q13796 1616 aa11.82□□□□□ -0.52
TRAF3-206ENST00000558880 KIF12Q96FN5 646 aa11.82□□□□□ -0.52
TRAF3-206ENST00000558880 DISP1Q96F81 1524 aa11.81□□□□□ -0.52
TRAF3-206ENST00000558880 UGGT2Q9NYU1 1516 aa11.81□□□□□ -0.52
TRAF3-206ENST00000558880 MAP3K13O43283 966 aa11.81□□□□□ -0.52
TRAF3-206ENST00000558880 UBTFP17480 764 aaKnown RBP11.81□□□□□ -0.52
TRAF3-206ENST00000558880 MS4A3Q96HJ5 214 aa11.81□□□□□ -0.52
TRAF3-206ENST00000558880 IQGAP2Q13576 1575 aa11.8□□□□□ -0.52
TRAF3-206ENST00000558880 KDM6BO15054 1643 aa11.8□□□□□ -0.52
TRAF3-206ENST00000558880 PRG4Q92954 1404 aaPredicted RBP11.77□□□□□ -0.52
TRAF3-206ENST00000558880 ARHGAP35Q9NRY4 1499 aa11.77□□□□□ -0.52
TRAF3-206ENST00000558880 TSPOAP1O95153 1857 aa11.77□□□□□ -0.53
TRAF3-206ENST00000558880 ABCC10Q5T3U5 1492 aa11.76□□□□□ -0.53
TRAF3-206ENST00000558880 CTTNBP2Q8WZ74 1663 aa11.76□□□□□ -0.53
TRAF3-206ENST00000558880 PCDHB13Q9Y5F0 798 aa11.76□□□□□ -0.53
TRAF3-206ENST00000558880 SAMD9Q5K651 1589 aa11.75□□□□□ -0.53
TRAF3-206ENST00000558880 CEP162Q5TB80 1403 aa11.75□□□□□ -0.53
TRAF3-206ENST00000558880 CLCN6P51797 869 aa11.74□□□□□ -0.53
TRAF3-206ENST00000558880 DIP2BQ9P265 1576 aa11.73□□□□□ -0.53
TRAF3-206ENST00000558880 HECW2Q9P2P5 1572 aa11.73□□□□□ -0.53
TRAF3-206ENST00000558880 KIAA0556O60303 1618 aa11.72□□□□□ -0.53
TRAF3-206ENST00000558880 CLIP1P30622 1438 aa11.72□□□□□ -0.53
TRAF3-206ENST00000558880 RANGAP1P46060 587 aaPredicted RBP11.72□□□□□ -0.53
TRAF3-206ENST00000558880 TRPC6Q9Y210 931 aa11.72□□□□□ -0.53
TRAF3-206ENST00000558880 FHOD3Q2V2M9 1422 aa11.71□□□□□ -0.53
TRAF3-206ENST00000558880 IFNL1Q8IU54 200 aa11.71□□□□□ -0.53
TRAF3-206ENST00000558880 P3H3Q8IVL6 736 aa11.71□□□□□ -0.53
TRAF3-206ENST00000558880 ADGRL1O94910 1474 aa11.7□□□□□ -0.54
TRAF3-206ENST00000558880 PCDHB8Q9UN66 801 aa11.7□□□□□ -0.54
TRAF3-206ENST00000558880 DCBLD2Q96PD2 775 aa11.69□□□□□ -0.54
TRAF3-206ENST00000558880 EFCAB5A4FU69 1503 aa11.68□□□□□ -0.54
TRAF3-206ENST00000558880 MAPKBP1O60336 1514 aa11.68□□□□□ -0.54
TRAF3-206ENST00000558880 CHRM1P11229 460 aaPredicted RBP11.67□□□□□ -0.54
TRAF3-206ENST00000558880 PKD2Q13563 968 aa11.67□□□□□ -0.54
TRAF3-206ENST00000558880 CARMIL2Q6F5E8 1435 aa11.67□□□□□ -0.54
TRAF3-206ENST00000558880 POTEIP0CG38 1075 aa11.66□□□□□ -0.54
TRAF3-206ENST00000558880 SGIP1Q9BQI5 828 aa11.66□□□□□ -0.54
TRAF3-206ENST00000558880 ECM2O94769 699 aaPredicted RBP11.65□□□□□ -0.54
TRAF3-206ENST00000558880 FBXO41Q8TF61 875 aa11.65□□□□□ -0.54
TRAF3-206ENST00000558880 PTPRGP23470 1445 aa11.65□□□□□ -0.54
TRAF3-206ENST00000558880 ADCY10Q96PN6 1610 aa11.64□□□□□ -0.55
TRAF3-206ENST00000558880 PLB1Q6P1J6 1458 aa11.64□□□□□ -0.55
TRAF3-206ENST00000558880 ABCA8O94911 1581 aa11.62□□□□□ -0.55
TRAF3-206ENST00000558880 TTBK1Q5TCY1 1321 aaPredicted RBP11.61□□□□□ -0.55
TRAF3-206ENST00000558880 ZNF467Q7Z7K2 595 aaPredicted RBP11.61□□□□□ -0.55
TRAF3-206ENST00000558880 BMP2KQ9NSY1 1161 aaPredicted RBP11.6□□□□□ -0.55
TRAF3-206ENST00000558880 UACAQ9BZF9 1416 aa11.6□□□□□ -0.55
TRAF3-206ENST00000558880 UHRF1BP1LA0JNW5 1464 aa11.59□□□□□ -0.55
TRAF3-206ENST00000558880 NUP153P49790 1475 aaKnown RBP11.59□□□□□ -0.55
TRAF3-206ENST00000558880 RNF25Q96BH1 459 aaPredicted RBP11.59□□□□□ -0.55
TRAF3-206ENST00000558880 FMN1Q68DA7 1419 aa11.58□□□□□ -0.56
TRAF3-206ENST00000558880 VPS8Q8N3P4 1428 aa11.58□□□□□ -0.56
TRAF3-206ENST00000558880 CASKIN1Q8WXD9 1431 aa11.58□□□□□ -0.56
TRAF3-206ENST00000558880 ATMINO43313 823 aaPredicted RBP11.57□□□□□ -0.56
TRAF3-206ENST00000558880 TMEM106CQ9BVX2 250 aa11.57□□□□□ -0.56
TRAF3-206ENST00000558880 TTLL13PA6NNM8 815 aa11.56□□□□□ -0.56
TRAF3-206ENST00000558880 TIE1P35590 1138 aa11.56□□□□□ -0.56
TRAF3-206ENST00000558880 ATN1P54259 1190 aaPredicted RBP11.56□□□□□ -0.56
TRAF3-206ENST00000558880 PPRC1Q5VV67 1664 aaKnown RBP11.55□□□□□ -0.56
TRAF3-206ENST00000558880 ABCC2Q92887 1545 aa11.55□□□□□ -0.56
TRAF3-206ENST00000558880 PCF11O94913 1555 aaKnown RBP11.55□□□□□ -0.56
TRAF3-206ENST00000558880 RGL2O15211 777 aa11.55□□□□□ -0.56
TRAF3-206ENST00000558880 ASTLQ6HA08 431 aaPredicted RBP11.55□□□□□ -0.56
TRAF3-206ENST00000558880 PELP1Q8IZL8 1130 aaKnown RBP11.55□□□□□ -0.56
TRAF3-206ENST00000558880 ATP10BO94823 1461 aa11.55□□□□□ -0.56
TRAF3-206ENST00000558880 KDM5BQ9UGL1 1544 aa11.55□□□□□ -0.56
TRAF3-206ENST00000558880 LMTK3Q96Q04 1460 aa11.54□□□□□ -0.56
TRAF3-206ENST00000558880 RIOK3O14730 519 aaKnown RBP11.53□□□□□ -0.56
TRAF3-206ENST00000558880 PSEN1P49768 467 aa11.53□□□□□ -0.56
TRAF3-206ENST00000558880 RAPGEF6Q8TEU7 1601 aa11.53□□□□□ -0.56
TRAF3-206ENST00000558880 COL17A1Q9UMD9 1497 aaPredicted RBP11.52□□□□□ -0.56
TRAF3-206ENST00000558880 FYCO1Q9BQS8 1478 aa11.51□□□□□ -0.57
TRAF3-206ENST00000558880 EPRSP07814 1512 aaKnown RBP11.51□□□□□ -0.57
TRAF3-206ENST00000558880 PDAP1Q13442 181 aaKnown RBP11.51□□□□□ -0.57
TRAF3-206ENST00000558880 CDK13Q14004 1512 aaKnown RBP11.5□□□□□ -0.57
TRAF3-206ENST00000558880 ARID3CA6NKF2 412 aa11.5□□□□□ -0.57
TRAF3-206ENST00000558880 TRIM35Q9UPQ4 493 aa11.5□□□□□ -0.57
TRAF3-206ENST00000558880 ASXL2Q76L83 1435 aa11.5□□□□□ -0.57
TRAF3-206ENST00000558880 MAGI3Q5TCQ9 1506 aa11.5□□□□□ -0.57
TRAF3-206ENST00000558880 LRRIQ1Q96JM4 1722 aa11.49□□□□□ -0.57
TRAF3-206ENST00000558880 RTN4Q9NQC3 1192 aaKnown RBP11.49□□□□□ -0.57
TRAF3-206ENST00000558880 KANK4Q5T7N3 995 aaPredicted RBP11.48□□□□□ -0.57
TRAF3-206ENST00000558880 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms