RNA–Protein interactions for RNA: ENST00000558867.1

CDC42BPB-203, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-203ENST00000558867 EFCAB2Q5VUJ9 269 aa26.5■■□□□ 1.83
CDC42BPB-203ENST00000558867 HECW1Q76N89 1606 aa26.48■■□□□ 1.83
CDC42BPB-203ENST00000558867 CDK13Q14004 1512 aaKnown RBP26.48■■□□□ 1.83
CDC42BPB-203ENST00000558867 FMN1Q68DA7 1419 aa26.48■■□□□ 1.83
CDC42BPB-203ENST00000558867 UBTFP17480 764 aaKnown RBP26.47■■□□□ 1.83
CDC42BPB-203ENST00000558867 ATP10AO60312 1499 aa26.44■■□□□ 1.82
CDC42BPB-203ENST00000558867 FER1L4A9Z1Z3 1794 aa26.43■■□□□ 1.82
CDC42BPB-203ENST00000558867 C9orf84Q5VXU9 1444 aa26.41■■□□□ 1.82
CDC42BPB-203ENST00000558867 MYO5CQ9NQX4 1742 aa26.39■■□□□ 1.82
CDC42BPB-203ENST00000558867 CERKQ8TCT0 537 aa26.39■■□□□ 1.82
CDC42BPB-203ENST00000558867 MYT1LQ9UL68 1186 aa26.38■■□□□ 1.81
CDC42BPB-203ENST00000558867 SIGLEC1Q9BZZ2 1709 aa26.37■■□□□ 1.81
CDC42BPB-203ENST00000558867 CLIP1P30622 1438 aa26.36■■□□□ 1.81
CDC42BPB-203ENST00000558867 ZNF518AQ6AHZ1 1483 aa26.36■■□□□ 1.81
CDC42BPB-203ENST00000558867 ARHGEF12Q9NZN5 1544 aa26.35■■□□□ 1.81
CDC42BPB-203ENST00000558867 DMRT2Q9Y5R5 561 aa26.35■■□□□ 1.81
CDC42BPB-203ENST00000558867 EHMT2Q96KQ7 1210 aa26.34■■□□□ 1.81
CDC42BPB-203ENST00000558867 KIF14Q15058 1648 aa26.34■■□□□ 1.81
CDC42BPB-203ENST00000558867 TROQ12816 1431 aaPredicted RBP26.31■■□□□ 1.8
CDC42BPB-203ENST00000558867 ARHGAP5Q13017 1502 aa26.31■■□□□ 1.8
CDC42BPB-203ENST00000558867 PREX1Q8TCU6 1659 aa26.31■■□□□ 1.8
CDC42BPB-203ENST00000558867 ARHGAP35Q9NRY4 1499 aa26.29■■□□□ 1.8
CDC42BPB-203ENST00000558867 AFAP1Q8N556 730 aa26.28■■□□□ 1.8
CDC42BPB-203ENST00000558867 ESF1Q9H501 851 aaKnown RBP26.28■■□□□ 1.8
CDC42BPB-203ENST00000558867 CEBPAP49715 358 aaPredicted RBP26.27■■□□□ 1.8
CDC42BPB-203ENST00000558867 UHRF1BP1Q6BDS2 1440 aa26.25■■□□□ 1.79
CDC42BPB-203ENST00000558867 KDM5CP41229 1560 aa26.23■■□□□ 1.79
CDC42BPB-203ENST00000558867 SETD1BQ9UPS6 1966 aaKnown RBP26.22■■□□□ 1.79
CDC42BPB-203ENST00000558867 MLH3Q9UHC1 1453 aa26.18■■□□□ 1.78
CDC42BPB-203ENST00000558867 REREQ9P2R6 1566 aa26.18■■□□□ 1.78
CDC42BPB-203ENST00000558867 DIP2CQ9Y2E4 1556 aa26.16■■□□□ 1.78
CDC42BPB-203ENST00000558867 CCDC18Q5T9S5 1454 aa26.15■■□□□ 1.78
CDC42BPB-203ENST00000558867 CDC42BPBQ9Y5S2 1711 aa26.12■■□□□ 1.77
CDC42BPB-203ENST00000558867 AGLP35573 1532 aa26.11■■□□□ 1.77
CDC42BPB-203ENST00000558867 PREX2Q70Z35 1606 aa26.1■■□□□ 1.77
CDC42BPB-203ENST00000558867 STRCQ7RTU9 1775 aa26.1■■□□□ 1.77
CDC42BPB-203ENST00000558867 CASKIN1Q8WXD9 1431 aa26.09■■□□□ 1.77
CDC42BPB-203ENST00000558867 CNTLNQ9NXG0 1405 aa26.09■■□□□ 1.77
CDC42BPB-203ENST00000558867 ABCA6Q8N139 1617 aa26.09■■□□□ 1.77
CDC42BPB-203ENST00000558867 ABCC1P33527 1531 aa26.09■■□□□ 1.77
CDC42BPB-203ENST00000558867 PTPRTO14522 1441 aa26.08■■□□□ 1.77
CDC42BPB-203ENST00000558867 TRAPPC8Q9Y2L5 1435 aa26.08■■□□□ 1.77
CDC42BPB-203ENST00000558867 LRRIQ1Q96JM4 1722 aa26.07■■□□□ 1.76
CDC42BPB-203ENST00000558867 C3P01024 1663 aa26.06■■□□□ 1.76
CDC42BPB-203ENST00000558867 CHIC1Q5VXU3 224 aa26.05■■□□□ 1.76
CDC42BPB-203ENST00000558867 ITSN2Q9NZM3 1697 aa26.04■■□□□ 1.76
CDC42BPB-203ENST00000558867 DISP3Q9P2K9 1392 aa26.03■■□□□ 1.76
CDC42BPB-203ENST00000558867 ZNF777Q9ULD5 760 aaPredicted RBP26.01■■□□□ 1.75
CDC42BPB-203ENST00000558867 KIDINS220Q9ULH0 1771 aa25.98■■□□□ 1.75
CDC42BPB-203ENST00000558867 SPAG9O60271 1321 aaKnown RBP25.97■■□□□ 1.75
CDC42BPB-203ENST00000558867 FYCO1Q9BQS8 1478 aa25.97■■□□□ 1.75
CDC42BPB-203ENST00000558867 CDC42BPAQ5VT25 1732 aa25.97■■□□□ 1.75
CDC42BPB-203ENST00000558867 NPATQ14207 1427 aa25.96■■□□□ 1.75
CDC42BPB-203ENST00000558867 NCOA1Q15788 1441 aa25.93■■□□□ 1.74
CDC42BPB-203ENST00000558867 SAMD9LQ8IVG5 1584 aa25.93■■□□□ 1.74
CDC42BPB-203ENST00000558867 IQSEC2Q5JU85 1478 aa25.92■■□□□ 1.74
CDC42BPB-203ENST00000558867 ZMYM3Q14202 1370 aa25.92■■□□□ 1.74
CDC42BPB-203ENST00000558867 PLEKHH2Q8IVE3 1493 aa25.91■■□□□ 1.74
CDC42BPB-203ENST00000558867 MROH2AA6NES4 1674 aa25.91■■□□□ 1.74
CDC42BPB-203ENST00000558867 HNRNPMP52272 730 aaKnown RBP eCLIP25.9■■□□□ 1.74
CDC42BPB-203ENST00000558867 CFDP1Q9UEE9 299 aaPredicted RBP25.9■■□□□ 1.74
CDC42BPB-203ENST00000558867 SYCP2Q9BX26 1530 aa25.88■■□□□ 1.73
CDC42BPB-203ENST00000558867 GPATCH8Q9UKJ3 1502 aaKnown RBP25.88■■□□□ 1.73
CDC42BPB-203ENST00000558867 KIAA1107Q9UPP5 1409 aa25.88■■□□□ 1.73
CDC42BPB-203ENST00000558867 CCNB3Q8WWL7 1395 aa25.86■■□□□ 1.73
CDC42BPB-203ENST00000558867 CAMSAP1Q5T5Y3 1602 aa25.86■■□□□ 1.73
CDC42BPB-203ENST00000558867 LTBP4Q8N2S1 1624 aa25.86■■□□□ 1.73
CDC42BPB-203ENST00000558867 SOCS7O14512 581 aa25.86■■□□□ 1.73
CDC42BPB-203ENST00000558867 SUPT6HQ7KZ85 1726 aaKnown RBP25.85■■□□□ 1.73
CDC42BPB-203ENST00000558867 ATP7AQ04656 1500 aa25.84■■□□□ 1.73
CDC42BPB-203ENST00000558867 PKD2Q13563 968 aa25.84■■□□□ 1.73
CDC42BPB-203ENST00000558867 PPP6R1Q9UPN7 881 aa25.84■■□□□ 1.73
CDC42BPB-203ENST00000558867 A2MP01023 1474 aa25.83■■□□□ 1.73
CDC42BPB-203ENST00000558867 GGT6Q6P531 493 aa25.82■■□□□ 1.72
CDC42BPB-203ENST00000558867 ILDR2Q71H61 639 aa25.82■■□□□ 1.72
CDC42BPB-203ENST00000558867 MTUS2Q5JR59 1369 aa25.81■■□□□ 1.72
CDC42BPB-203ENST00000558867 NCKAP5LQ9HCH0 1330 aa25.8■■□□□ 1.72
CDC42BPB-203ENST00000558867 SPATA31D1Q6ZQQ2 1576 aa25.79■■□□□ 1.72
CDC42BPB-203ENST00000558867 CLTCQ00610 1675 aaKnown RBP25.78■■□□□ 1.72
CDC42BPB-203ENST00000558867 PLA2R1Q13018 1463 aa25.77■■□□□ 1.72
CDC42BPB-203ENST00000558867 INO80Q9ULG1 1556 aaPredicted RBP25.77■■□□□ 1.72
CDC42BPB-203ENST00000558867 PLXNC1O60486 1568 aa25.76■■□□□ 1.71
CDC42BPB-203ENST00000558867 UBAP1LF5GYI3 381 aa25.74■■□□□ 1.71
CDC42BPB-203ENST00000558867 PTPRKQ15262 1439 aa25.73■■□□□ 1.71
CDC42BPB-203ENST00000558867 ZNF142P52746 1687 aaPredicted RBP25.73■■□□□ 1.71
CDC42BPB-203ENST00000558867 MYO3AQ8NEV4 1616 aa25.73■■□□□ 1.71
CDC42BPB-203ENST00000558867 ZNF335Q9H4Z2 1342 aaPredicted RBP25.72■■□□□ 1.71
CDC42BPB-203ENST00000558867 ADGBQ8N7X0 1667 aa25.72■■□□□ 1.71
CDC42BPB-203ENST00000558867 CEP170BQ9Y4F5 1589 aaPredicted RBP25.72■■□□□ 1.71
CDC42BPB-203ENST00000558867 TCOF1Q13428 1488 aaKnown RBP25.67■■□□□ 1.7
CDC42BPB-203ENST00000558867 RTEL1-TNFRSF6BF6WH68 1400 aa25.67■■□□□ 1.7
CDC42BPB-203ENST00000558867 A2ML1A8K2U0 1454 aa25.64■■□□□ 1.69
CDC42BPB-203ENST00000558867 DHX29Q7Z478 1369 aaKnown RBP25.63■■□□□ 1.69
CDC42BPB-203ENST00000558867 EHBP1L1Q8N3D4 1523 aa25.63■■□□□ 1.69
CDC42BPB-203ENST00000558867 ZNF644Q9H582 1327 aaPredicted RBP25.63■■□□□ 1.69
CDC42BPB-203ENST00000558867 RSPH4AQ5TD94 716 aa25.62■■□□□ 1.69
CDC42BPB-203ENST00000558867 TIAM1Q13009 1591 aa25.61■■□□□ 1.69
CDC42BPB-203ENST00000558867 MBD5Q9P267 1494 aa25.6■■□□□ 1.69
CDC42BPB-203ENST00000558867 KIF3BO15066 747 aa25.59■■□□□ 1.69
CDC42BPB-203ENST00000558867 CEP162Q5TB80 1403 aa25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms