RNA–Protein interactions for RNA: ENST00000558445.5

TRPM1-207, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRPM1, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-207ENST00000558445 DHX37Q8IY37 1157 aaKnown RBP12.88□□□□□ -0.35
TRPM1-207ENST00000558445 BAZ1BQ9UIG0 1483 aaKnown RBP12.88□□□□□ -0.35
TRPM1-207ENST00000558445 HOMEZQ8IX15 550 aa12.88□□□□□ -0.35
TRPM1-207ENST00000558445 LETM1O95202 739 aaPredicted RBP12.87□□□□□ -0.35
TRPM1-207ENST00000558445 CLIP1P30622 1438 aa12.87□□□□□ -0.35
TRPM1-207ENST00000558445 ZNF771Q7L3S4 317 aaPredicted RBP12.87□□□□□ -0.35
TRPM1-207ENST00000558445 TNNT3P45378 269 aaPredicted RBP12.87□□□□□ -0.35
TRPM1-207ENST00000558445 FAM161AQ3B820 660 aa12.87□□□□□ -0.35
TRPM1-207ENST00000558445 UTP14CQ5TAP6 766 aaKnown RBP12.87□□□□□ -0.35
TRPM1-207ENST00000558445 CSPP1Q1MSJ5 1256 aa12.86□□□□□ -0.35
TRPM1-207ENST00000558445 GTPBP4Q9BZE4 634 aaKnown RBP12.86□□□□□ -0.35
TRPM1-207ENST00000558445 GOLGA3Q08378 1498 aa12.86□□□□□ -0.35
TRPM1-207ENST00000558445 VGLL3A8MV65 326 aa12.85□□□□□ -0.35
TRPM1-207ENST00000558445 XRCC6P12956 609 aaKnown RBP eCLIP12.84□□□□□ -0.35
TRPM1-207ENST00000558445 CHMP4AQ9BY43 222 aa12.83□□□□□ -0.36
TRPM1-207ENST00000558445 ZFP91Q96JP5 570 aaPredicted RBP12.83□□□□□ -0.36
TRPM1-207ENST00000558445 UQCRHLA0A096LP55 91 aa12.83□□□□□ -0.36
TRPM1-207ENST00000558445 UQCRHP07919 91 aa12.83□□□□□ -0.36
TRPM1-207ENST00000558445 GOLGA6L22H0YM25 854 aa12.82□□□□□ -0.36
TRPM1-207ENST00000558445 DDX11L8A8MPP1 907 aa12.82□□□□□ -0.36
TRPM1-207ENST00000558445 TERF1P54274 439 aa12.82□□□□□ -0.36
TRPM1-207ENST00000558445 EXOC6Q8TAG9 804 aa12.82□□□□□ -0.36
TRPM1-207ENST00000558445 GRPEL1Q9HAV7 217 aa12.82□□□□□ -0.36
TRPM1-207ENST00000558445 NACADO15069 1562 aa12.82□□□□□ -0.36
TRPM1-207ENST00000558445 CCDC66A2RUB6 948 aa12.81□□□□□ -0.36
TRPM1-207ENST00000558445 TMC1Q8TDI8 760 aa12.81□□□□□ -0.36
TRPM1-207ENST00000558445 DMTNQ08495 405 aa12.81□□□□□ -0.36
TRPM1-207ENST00000558445 EIF4G2P78344 907 aaKnown RBP eCLIP12.8□□□□□ -0.36
TRPM1-207ENST00000558445 SMG6Q86US8 1419 aaKnown RBP12.8□□□□□ -0.36
TRPM1-207ENST00000558445 ZSCAN30Q86W11 494 aa12.8□□□□□ -0.36
TRPM1-207ENST00000558445 TEX2Q8IWB9 1127 aa12.8□□□□□ -0.36
TRPM1-207ENST00000558445 PTMAP06454 111 aaKnown RBP12.79□□□□□ -0.36
TRPM1-207ENST00000558445 FAM50AQ14320 339 aaKnown RBP12.79□□□□□ -0.36
TRPM1-207ENST00000558445 CGNQ9P2M7 1197 aaKnown RBP12.79□□□□□ -0.36
TRPM1-207ENST00000558445 AKNAQ7Z591 1439 aa12.79□□□□□ -0.36
TRPM1-207ENST00000558445 DYNC1I1O14576 645 aa12.79□□□□□ -0.36
TRPM1-207ENST00000558445 VPS8Q8N3P4 1428 aa12.79□□□□□ -0.36
TRPM1-207ENST00000558445 RRP1P56182 461 aaKnown RBP12.79□□□□□ -0.36
TRPM1-207ENST00000558445 RCAN3Q9UKA8 241 aa12.79□□□□□ -0.36
TRPM1-207ENST00000558445 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.78□□□□□ -0.36
TRPM1-207ENST00000558445 CCDC173Q0VFZ6 552 aa12.78□□□□□ -0.36
TRPM1-207ENST00000558445 DNAJC2Q99543 621 aaKnown RBP12.77□□□□□ -0.36
TRPM1-207ENST00000558445 RSF1Q96T23 1441 aaPredicted RBP12.77□□□□□ -0.36
TRPM1-207ENST00000558445 CCDC94Q9BW85 323 aaPredicted RBP12.77□□□□□ -0.37
TRPM1-207ENST00000558445 BCCIPQ9P287 314 aaKnown RBP eCLIP12.77□□□□□ -0.37
TRPM1-207ENST00000558445 OFD1O75665 1012 aa12.76□□□□□ -0.37
TRPM1-207ENST00000558445 MAPK8IP2Q13387 824 aaPredicted RBP12.76□□□□□ -0.37
TRPM1-207ENST00000558445 PANK2Q9BZ23 570 aa12.76□□□□□ -0.37
TRPM1-207ENST00000558445 CEP164Q9UPV0 1460 aa12.76□□□□□ -0.37
TRPM1-207ENST00000558445 RB1CC1Q8TDY2 1594 aa12.76□□□□□ -0.37
TRPM1-207ENST00000558445 TRAK2O60296 914 aa12.76□□□□□ -0.37
TRPM1-207ENST00000558445 E9PSI1 815 aa12.76□□□□□ -0.37
TRPM1-207ENST00000558445 AEBP1Q8IUX7 1158 aa12.76□□□□□ -0.37
TRPM1-207ENST00000558445 GBP4Q96PP9 640 aa12.74□□□□□ -0.37
TRPM1-207ENST00000558445 CLGNO14967 610 aa12.74□□□□□ -0.37
TRPM1-207ENST00000558445 CHAF1AQ13111 956 aaPredicted RBP12.74□□□□□ -0.37
TRPM1-207ENST00000558445 SKOR2Q2VWA4 1001 aaPredicted RBP12.73□□□□□ -0.37
TRPM1-207ENST00000558445 TSPYL1Q9H0U9 437 aa12.73□□□□□ -0.37
TRPM1-207ENST00000558445 PRKRIP1Q9H875 184 aaPredicted RBP12.73□□□□□ -0.37
TRPM1-207ENST00000558445 PATL2C9JE40 543 aaKnown RBP12.73□□□□□ -0.37
TRPM1-207ENST00000558445 RAB3GAP2Q9H2M9 1393 aa12.72□□□□□ -0.37
TRPM1-207ENST00000558445 CCNB3Q8WWL7 1395 aa12.72□□□□□ -0.37
TRPM1-207ENST00000558445 HSP90B1P14625 803 aaKnown RBP12.72□□□□□ -0.37
TRPM1-207ENST00000558445 CBX1P83916 185 aa12.71□□□□□ -0.37
TRPM1-207ENST00000558445 CENPQQ7L2Z9 268 aaPredicted RBP12.71□□□□□ -0.37
TRPM1-207ENST00000558445 KTN1Q86UP2 1357 aaKnown RBP12.71□□□□□ -0.37
TRPM1-207ENST00000558445 MCM4P33991 863 aa12.71□□□□□ -0.38
TRPM1-207ENST00000558445 CHMP5Q9NZZ3 219 aa12.7□□□□□ -0.38
TRPM1-207ENST00000558445 SECISBP2LQ93073 1101 aaKnown RBP12.7□□□□□ -0.38
TRPM1-207ENST00000558445 NASPP49321 788 aaPredicted RBP12.69□□□□□ -0.38
TRPM1-207ENST00000558445 SASS6Q6UVJ0 657 aa12.69□□□□□ -0.38
TRPM1-207ENST00000558445 SPRYD3Q8NCJ5 442 aa12.69□□□□□ -0.38
TRPM1-207ENST00000558445 C14orf37Q86TY3 774 aa12.69□□□□□ -0.38
TRPM1-207ENST00000558445 KCNJ4P48050 445 aa12.68□□□□□ -0.38
TRPM1-207ENST00000558445 HMGN5P82970 282 aaKnown RBP12.68□□□□□ -0.38
TRPM1-207ENST00000558445 TULP1O00294 542 aaPredicted RBP12.68□□□□□ -0.38
TRPM1-207ENST00000558445 KIAA2012Q0VF49 1180 aa12.68□□□□□ -0.38
TRPM1-207ENST00000558445 AXDND1Q5T1B0 1012 aaPredicted RBP12.68□□□□□ -0.38
TRPM1-207ENST00000558445 WWC1Q8IX03 1113 aa12.68□□□□□ -0.38
TRPM1-207ENST00000558445 SENP3-EIF4A1A0A087X0R7 540 aa12.68□□□□□ -0.38
TRPM1-207ENST00000558445 SETD5Q9C0A6 1442 aa12.68□□□□□ -0.38
TRPM1-207ENST00000558445 HSCBQ8IWL3 235 aa12.67□□□□□ -0.38
TRPM1-207ENST00000558445 CC2D1BQ5T0F9 858 aaKnown RBP12.67□□□□□ -0.38
TRPM1-207ENST00000558445 WDR97A6NE52 1622 aa12.67□□□□□ -0.38
TRPM1-207ENST00000558445 ZNF830Q96NB3 372 aaPredicted RBP12.67□□□□□ -0.38
TRPM1-207ENST00000558445 HSPA5P11021 654 aaKnown RBP12.65□□□□□ -0.38
TRPM1-207ENST00000558445 TMEM51Q9NW97 253 aa12.65□□□□□ -0.38
TRPM1-207ENST00000558445 KIF3AQ9Y496 699 aa12.65□□□□□ -0.38
TRPM1-207ENST00000558445 HDAC5Q9UQL6 1122 aa12.64□□□□□ -0.39
TRPM1-207ENST00000558445 PDE3BQ13370 1112 aa12.64□□□□□ -0.39
TRPM1-207ENST00000558445 NBPF1Q3BBV0 1214 aa12.63□□□□□ -0.39
TRPM1-207ENST00000558445 TIGD1Q96MW7 591 aa12.63□□□□□ -0.39
TRPM1-207ENST00000558445 FSD2A1L4K1 749 aa12.63□□□□□ -0.39
TRPM1-207ENST00000558445 CALCOCO1Q9P1Z2 691 aa12.62□□□□□ -0.39
TRPM1-207ENST00000558445 CNTLNQ9NXG0 1405 aa12.62□□□□□ -0.39
TRPM1-207ENST00000558445 FAM193AP78312 1265 aa12.62□□□□□ -0.39
TRPM1-207ENST00000558445 ABCC9O60706 1549 aa12.61□□□□□ -0.39
TRPM1-207ENST00000558445 RIPK4P57078 832 aa12.61□□□□□ -0.39
TRPM1-207ENST00000558445 RNF123Q5XPI4 1314 aa12.6□□□□□ -0.39
TRPM1-207ENST00000558445 VGFO15240 615 aaPredicted RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms