RNA–Protein interactions for RNA: ENST00000558411.1

PCAT29-201, prostate cancer associated transcript 29, humanhuman

TSL 2 BASIC

Gene PCAT29, Length 2,121 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-201ENST00000558411 MYOM3Q5VTT5 1437 aa14.98□□□□□ -0.01
PCAT29-201ENST00000558411 SPATA31E1Q6ZUB1 1445 aa14.98□□□□□ -0.01
PCAT29-201ENST00000558411 FHOD3Q2V2M9 1422 aa14.98□□□□□ -0.01
PCAT29-201ENST00000558411 KIF7Q2M1P5 1343 aa14.97□□□□□ -0.01
PCAT29-201ENST00000558411 SUPT6HQ7KZ85 1726 aaKnown RBP14.96□□□□□ -0.01
PCAT29-201ENST00000558411 NPM2Q86SE8 214 aaKnown RBP14.96□□□□□ -0.01
PCAT29-201ENST00000558411 LAMC3Q9Y6N6 1575 aa14.96□□□□□ -0.02
PCAT29-201ENST00000558411 SNAPC4Q5SXM2 1469 aa14.95□□□□□ -0.02
PCAT29-201ENST00000558411 RSPH6AQ9H0K4 717 aa14.95□□□□□ -0.02
PCAT29-201ENST00000558411 BRPF3Q9ULD4 1205 aa14.95□□□□□ -0.02
PCAT29-201ENST00000558411 DHX29Q7Z478 1369 aaKnown RBP14.94□□□□□ -0.02
PCAT29-201ENST00000558411 THOC2Q8NI27 1593 aaKnown RBP14.94□□□□□ -0.02
PCAT29-201ENST00000558411 MIA2Q96PC5 1412 aa14.93□□□□□ -0.02
PCAT29-201ENST00000558411 CTTNBP2Q8WZ74 1663 aa14.93□□□□□ -0.02
PCAT29-201ENST00000558411 MTUS2Q5JR59 1369 aa14.93□□□□□ -0.02
PCAT29-201ENST00000558411 ATP1B4Q9UN42 357 aaPredicted RBP14.93□□□□□ -0.02
PCAT29-201ENST00000558411 L3MBTL2Q969R5 705 aa14.92□□□□□ -0.02
PCAT29-201ENST00000558411 EHBP1L1Q8N3D4 1523 aa14.92□□□□□ -0.02
PCAT29-201ENST00000558411 TCOF1Q13428 1488 aaKnown RBP14.92□□□□□ -0.02
PCAT29-201ENST00000558411 RPRD2Q5VT52 1461 aaKnown RBP14.91□□□□□ -0.02
PCAT29-201ENST00000558411 TEX14Q8IWB6 1497 aa14.91□□□□□ -0.02
PCAT29-201ENST00000558411 RRP1P56182 461 aaKnown RBP14.91□□□□□ -0.02
PCAT29-201ENST00000558411 KIF21AQ7Z4S6 1674 aa14.91□□□□□ -0.02
PCAT29-201ENST00000558411 FANCD2Q9BXW9 1451 aa14.9□□□□□ -0.02
PCAT29-201ENST00000558411 ARHGEF11O15085 1522 aa14.9□□□□□ -0.02
PCAT29-201ENST00000558411 FAM43AQ8N2R8 423 aa14.9□□□□□ -0.02
PCAT29-201ENST00000558411 LRRIQ1Q96JM4 1722 aa14.89□□□□□ -0.03
PCAT29-201ENST00000558411 ARID4BQ4LE39 1312 aaPredicted RBP14.89□□□□□ -0.03
PCAT29-201ENST00000558411 UGGT2Q9NYU1 1516 aa14.89□□□□□ -0.03
PCAT29-201ENST00000558411 P3H3Q8IVL6 736 aa14.89□□□□□ -0.03
PCAT29-201ENST00000558411 NFKBIBQ15653 356 aa14.88□□□□□ -0.03
PCAT29-201ENST00000558411 PNISRQ8TF01 805 aaKnown RBP14.88□□□□□ -0.03
PCAT29-201ENST00000558411 LRPPRCP42704 1394 aaKnown RBP14.88□□□□□ -0.03
PCAT29-201ENST00000558411 EIF5BO60841 1220 aaKnown RBP14.87□□□□□ -0.03
PCAT29-201ENST00000558411 MPHOSPH9Q99550 1183 aa14.86□□□□□ -0.03
PCAT29-201ENST00000558411 CUL7Q14999 1698 aa14.86□□□□□ -0.03
PCAT29-201ENST00000558411 EXOC6Q8TAG9 804 aa14.86□□□□□ -0.03
PCAT29-201ENST00000558411 FRAT1Q92837 279 aaPredicted RBP14.86□□□□□ -0.03
PCAT29-201ENST00000558411 KDM6BO15054 1643 aa14.85□□□□□ -0.03
PCAT29-201ENST00000558411 NBPF8Q3BBV2 869 aa14.84□□□□□ -0.03
PCAT29-201ENST00000558411 GRIN2BQ13224 1484 aa14.84□□□□□ -0.03
PCAT29-201ENST00000558411 KTN1Q86UP2 1357 aaKnown RBP14.84□□□□□ -0.03
PCAT29-201ENST00000558411 ANKRD30BQ9BXX2 1392 aa14.84□□□□□ -0.03
PCAT29-201ENST00000558411 SAMD9Q5K651 1589 aa14.83□□□□□ -0.03
PCAT29-201ENST00000558411 ROCK2O75116 1388 aaKnown RBP14.83□□□□□ -0.03
PCAT29-201ENST00000558411 PDS5BQ9NTI5 1447 aa14.82□□□□□ -0.04
PCAT29-201ENST00000558411 PDE3BQ13370 1112 aa14.82□□□□□ -0.04
PCAT29-201ENST00000558411 RCAN3Q9UKA8 241 aa14.82□□□□□ -0.04
PCAT29-201ENST00000558411 BCORL1Q5H9F3 1711 aa14.82□□□□□ -0.04
PCAT29-201ENST00000558411 BRD4O60885 1362 aaPredicted RBP14.81□□□□□ -0.04
PCAT29-201ENST00000558411 RRP7BPQ9NSQ0 103 aa14.8□□□□□ -0.04
PCAT29-201ENST00000558411 TMC1Q8TDI8 760 aa14.8□□□□□ -0.04
PCAT29-201ENST00000558411 MBD5Q9P267 1494 aa14.79□□□□□ -0.04
PCAT29-201ENST00000558411 DAXXQ9UER7 740 aaPredicted RBP14.78□□□□□ -0.04
PCAT29-201ENST00000558411 URB2Q14146 1524 aaKnown RBP14.77□□□□□ -0.04
PCAT29-201ENST00000558411 KIF14Q15058 1648 aa14.77□□□□□ -0.04
PCAT29-201ENST00000558411 KIF15Q9NS87 1388 aa14.77□□□□□ -0.04
PCAT29-201ENST00000558411 KDM5CP41229 1560 aa14.77□□□□□ -0.04
PCAT29-201ENST00000558411 GLIPR1L2Q4G1C9 344 aa14.77□□□□□ -0.05
PCAT29-201ENST00000558411 PKNOX2Q96KN3 472 aa14.77□□□□□ -0.05
PCAT29-201ENST00000558411 ROCK1Q13464 1354 aa14.75□□□□□ -0.05
PCAT29-201ENST00000558411 ERCC6Q03468 1493 aa14.75□□□□□ -0.05
PCAT29-201ENST00000558411 USP47Q96K76 1375 aa14.75□□□□□ -0.05
PCAT29-201ENST00000558411 ABCA10Q8WWZ4 1543 aa14.75□□□□□ -0.05
PCAT29-201ENST00000558411 MYBBP1AQ9BQG0 1328 aaKnown RBP14.74□□□□□ -0.05
PCAT29-201ENST00000558411 INSRP06213 1382 aa14.74□□□□□ -0.05
PCAT29-201ENST00000558411 RALBP1Q15311 655 aa14.74□□□□□ -0.05
PCAT29-201ENST00000558411 ZMYM4Q5VZL5 1548 aa14.73□□□□□ -0.05
PCAT29-201ENST00000558411 MAGI3Q5TCQ9 1506 aa14.72□□□□□ -0.05
PCAT29-201ENST00000558411 TOPBP1Q92547 1522 aa14.72□□□□□ -0.05
PCAT29-201ENST00000558411 E9PCH4 1651 aa14.72□□□□□ -0.05
PCAT29-201ENST00000558411 CHIC2Q9UKJ5 165 aa14.71□□□□□ -0.05
PCAT29-201ENST00000558411 DNMBPQ6XZF7 1577 aa14.7□□□□□ -0.06
PCAT29-201ENST00000558411 DCAF11Q8TEB1 546 aa14.69□□□□□ -0.06
PCAT29-201ENST00000558411 FOXD1Q16676 465 aa14.69□□□□□ -0.06
PCAT29-201ENST00000558411 FAM161AQ3B820 660 aa14.69□□□□□ -0.06
PCAT29-201ENST00000558411 MRC2Q9UBG0 1479 aa14.68□□□□□ -0.06
PCAT29-201ENST00000558411 KDM2BQ8NHM5 1336 aa14.68□□□□□ -0.06
PCAT29-201ENST00000558411 FRAT2O75474 233 aaPredicted RBP14.68□□□□□ -0.06
PCAT29-201ENST00000558411 PLEKHH2Q8IVE3 1493 aa14.67□□□□□ -0.06
PCAT29-201ENST00000558411 CENPQQ7L2Z9 268 aaPredicted RBP14.66□□□□□ -0.06
PCAT29-201ENST00000558411 RALGAPBQ86X10 1494 aa14.66□□□□□ -0.06
PCAT29-201ENST00000558411 UHRF1BP1Q6BDS2 1440 aa14.66□□□□□ -0.06
PCAT29-201ENST00000558411 DNMT1P26358 1616 aaKnown RBP14.66□□□□□ -0.06
PCAT29-201ENST00000558411 SLC4A3P48751 1232 aa14.66□□□□□ -0.06
PCAT29-201ENST00000558411 L1TD1Q5T7N2 865 aaKnown RBP14.66□□□□□ -0.06
PCAT29-201ENST00000558411 CRBNQ96SW2 442 aa14.65□□□□□ -0.06
PCAT29-201ENST00000558411 VIRMAQ69YN4 1812 aaKnown RBP14.65□□□□□ -0.06
PCAT29-201ENST00000558411 POLA1P09884 1462 aaPredicted RBP14.64□□□□□ -0.07
PCAT29-201ENST00000558411 C8orf34Q49A92 452 aa14.64□□□□□ -0.07
PCAT29-201ENST00000558411 DAPK1P53355 1430 aa14.64□□□□□ -0.07
PCAT29-201ENST00000558411 RAD54L2Q9Y4B4 1467 aa14.64□□□□□ -0.07
PCAT29-201ENST00000558411 WDR62O43379 1518 aa14.63□□□□□ -0.07
PCAT29-201ENST00000558411 BLMP54132 1417 aaPredicted RBP14.63□□□□□ -0.07
PCAT29-201ENST00000558411 NLRP13Q86W25 1043 aa14.63□□□□□ -0.07
PCAT29-201ENST00000558411 SLC4A1APQ9BWU0 796 aaKnown RBP14.63□□□□□ -0.07
PCAT29-201ENST00000558411 PZPP20742 1482 aa14.62□□□□□ -0.07
PCAT29-201ENST00000558411 CNGB1Q14028 1251 aaPredicted RBP14.62□□□□□ -0.07
PCAT29-201ENST00000558411 AEBP2Q6ZN18 517 aaPredicted RBP14.62□□□□□ -0.07
PCAT29-201ENST00000558411 POLR3GLQ9BT43 218 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms