RNA–Protein interactions for RNA: ENST00000558357.5

INO80-205, Transcript of INO80 complex subunit, humanhuman

TSL 1 (best)

Gene INO80, Length 5,503 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80-205ENST00000558357 RTF1Q92541 710 aaKnown RBP14.33□□□□□ -0.11
INO80-205ENST00000558357 HDGFP51858 240 aaKnown RBP14.33□□□□□ -0.12
INO80-205ENST00000558357 RB1CC1Q8TDY2 1594 aa14.33□□□□□ -0.12
INO80-205ENST00000558357 SRPK2P78362 688 aaKnown RBP14.32□□□□□ -0.12
INO80-205ENST00000558357 HTATSF1O43719 755 aaKnown RBP14.32□□□□□ -0.12
INO80-205ENST00000558357 RBM19Q9Y4C8 960 aaKnown RBP14.32□□□□□ -0.12
INO80-205ENST00000558357 SYAP1Q96A49 352 aaPredicted RBP14.3□□□□□ -0.12
INO80-205ENST00000558357 KTN1Q86UP2 1357 aaKnown RBP14.3□□□□□ -0.12
INO80-205ENST00000558357 MYO15BQ96JP2 1530 aa14.3□□□□□ -0.12
INO80-205ENST00000558357 RWDD1Q9H446 243 aaPredicted RBP14.29□□□□□ -0.12
INO80-205ENST00000558357 CALD1Q05682 793 aaKnown RBP14.29□□□□□ -0.12
INO80-205ENST00000558357 ISY1Q9ULR0 285 aaKnown RBP14.29□□□□□ -0.12
INO80-205ENST00000558357 FHAD1B1AJZ9 1412 aa14.28□□□□□ -0.12
INO80-205ENST00000558357 TCERG1O14776 1098 aaKnown RBP14.27□□□□□ -0.12
INO80-205ENST00000558357 SOX12O15370 315 aa14.27□□□□□ -0.13
INO80-205ENST00000558357 TPM4P67936 248 aa14.26□□□□□ -0.13
INO80-205ENST00000558357 APBB1O00213 710 aa14.26□□□□□ -0.13
INO80-205ENST00000558357 HDGFL2Q7Z4V5 671 aaPredicted RBP14.26□□□□□ -0.13
INO80-205ENST00000558357 NOC3LQ8WTT2 800 aaKnown RBP14.25□□□□□ -0.13
INO80-205ENST00000558357 NACADO15069 1562 aa14.25□□□□□ -0.13
INO80-205ENST00000558357 HSPA5P11021 654 aaKnown RBP14.25□□□□□ -0.13
INO80-205ENST00000558357 AMER1Q5JTC6 1135 aaPredicted RBP14.25□□□□□ -0.13
INO80-205ENST00000558357 RCAN3Q9UKA8 241 aa14.25□□□□□ -0.13
INO80-205ENST00000558357 NCBP3Q53F19 620 aaKnown RBP14.24□□□□□ -0.13
INO80-205ENST00000558357 ITPRIPQ8IWB1 547 aa14.24□□□□□ -0.13
INO80-205ENST00000558357 GZF1Q9H116 711 aaPredicted RBP14.24□□□□□ -0.13
INO80-205ENST00000558357 CHMP4AQ9BY43 222 aa14.23□□□□□ -0.13
INO80-205ENST00000558357 SLKQ9H2G2 1235 aaPredicted RBP14.23□□□□□ -0.13
INO80-205ENST00000558357 PMFBP1Q8TBY8 1022 aa14.23□□□□□ -0.13
INO80-205ENST00000558357 CCDC34Q96HJ3 373 aa14.23□□□□□ -0.13
INO80-205ENST00000558357 RALBP1Q15311 655 aa14.22□□□□□ -0.13
INO80-205ENST00000558357 GOLGA6L3A6NEY3 463 aa14.22□□□□□ -0.13
INO80-205ENST00000558357 BAZ1BQ9UIG0 1483 aaKnown RBP14.21□□□□□ -0.13
INO80-205ENST00000558357 SAFB2Q14151 953 aaKnown RBP eCLIP14.21□□□□□ -0.13
INO80-205ENST00000558357 CSPP1Q1MSJ5 1256 aa14.2□□□□□ -0.14
INO80-205ENST00000558357 U2AF1L5P0DN76 240 aaPredicted RBP14.2□□□□□ -0.14
INO80-205ENST00000558357 U2AF1Q01081 240 aaKnown RBP eCLIP14.2□□□□□ -0.14
INO80-205ENST00000558357 SETD5Q9C0A6 1442 aa14.2□□□□□ -0.14
INO80-205ENST00000558357 TNNT3P45378 269 aaPredicted RBP14.19□□□□□ -0.14
INO80-205ENST00000558357 GPATCH3Q96I76 525 aa14.19□□□□□ -0.14
INO80-205ENST00000558357 GOLGA6L1Q8N7Z2 621 aa14.19□□□□□ -0.14
INO80-205ENST00000558357 HDAC5Q9UQL6 1122 aa14.18□□□□□ -0.14
INO80-205ENST00000558357 MFAP1P55081 439 aaKnown RBP14.17□□□□□ -0.14
INO80-205ENST00000558357 HMMRO75330 724 aa14.17□□□□□ -0.14
INO80-205ENST00000558357 STK31Q9BXU1 1019 aa14.17□□□□□ -0.14
INO80-205ENST00000558357 ARID3AQ99856 593 aa14.16□□□□□ -0.14
INO80-205ENST00000558357 HSP90B1P14625 803 aaKnown RBP14.16□□□□□ -0.14
INO80-205ENST00000558357 PKD2Q13563 968 aa14.16□□□□□ -0.14
INO80-205ENST00000558357 SPAG9O60271 1321 aaKnown RBP14.15□□□□□ -0.14
INO80-205ENST00000558357 USP35Q9P2H5 1018 aa14.15□□□□□ -0.14
INO80-205ENST00000558357 ROCK2O75116 1388 aaKnown RBP14.15□□□□□ -0.14
INO80-205ENST00000558357 GORABQ5T7V8 394 aa14.15□□□□□ -0.14
INO80-205ENST00000558357 STK26Q9P289 416 aa14.15□□□□□ -0.14
INO80-205ENST00000558357 IPO9Q96P70 1041 aaKnown RBP14.15□□□□□ -0.14
INO80-205ENST00000558357 ARHGAP35Q9NRY4 1499 aa14.14□□□□□ -0.15
INO80-205ENST00000558357 A0A0U1RQG5 324 aaPredicted RBP14.14□□□□□ -0.15
INO80-205ENST00000558357 MLECQ14165 292 aa14.14□□□□□ -0.15
INO80-205ENST00000558357 TRIM6-TRIM34B2RNG4 842 aa14.13□□□□□ -0.15
INO80-205ENST00000558357 PHF14O94880 888 aa14.13□□□□□ -0.15
INO80-205ENST00000558357 SMC4Q9NTJ3 1288 aa14.13□□□□□ -0.15
INO80-205ENST00000558357 EIF3AQ14152 1382 aaKnown RBP14.12□□□□□ -0.15
INO80-205ENST00000558357 EIF4G1Q04637 1599 aaKnown RBP14.12□□□□□ -0.15
INO80-205ENST00000558357 CSB-PGBD3P0DP91 1061 aa14.12□□□□□ -0.15
INO80-205ENST00000558357 ZNF330Q9Y3S2 320 aaPredicted RBP14.12□□□□□ -0.15
INO80-205ENST00000558357 PAK3O75914 559 aaPredicted RBP14.11□□□□□ -0.15
INO80-205ENST00000558357 TMX4Q9H1E5 349 aaPredicted RBP14.11□□□□□ -0.15
INO80-205ENST00000558357 RASSF8Q8NHQ8 419 aa14.11□□□□□ -0.15
INO80-205ENST00000558357 CARMIL1Q5VZK9 1371 aa14.11□□□□□ -0.15
INO80-205ENST00000558357 GGT6Q6P531 493 aa14.1□□□□□ -0.15
INO80-205ENST00000558357 TAF7LQ5H9L4 462 aa14.1□□□□□ -0.15
INO80-205ENST00000558357 ERCC6Q03468 1493 aa14.1□□□□□ -0.15
INO80-205ENST00000558357 TPM3P06753 285 aa14.1□□□□□ -0.15
INO80-205ENST00000558357 KIF3AQ9Y496 699 aa14.1□□□□□ -0.15
INO80-205ENST00000558357 ST18O60284 1047 aa14.1□□□□□ -0.15
INO80-205ENST00000558357 CHMP3Q9Y3E7 222 aa14.09□□□□□ -0.15
INO80-205ENST00000558357 PDE3BQ13370 1112 aa14.09□□□□□ -0.15
INO80-205ENST00000558357 KIF16BQ96L93 1317 aa14.08□□□□□ -0.16
INO80-205ENST00000558357 CENPJQ9HC77 1338 aaPredicted RBP14.08□□□□□ -0.16
INO80-205ENST00000558357 LMOD3Q0VAK6 560 aa14.07□□□□□ -0.16
INO80-205ENST00000558357 DDX11L8A8MPP1 907 aa14.07□□□□□ -0.16
INO80-205ENST00000558357 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.07□□□□□ -0.16
INO80-205ENST00000558357 CEP89Q96ST8 783 aa14.06□□□□□ -0.16
INO80-205ENST00000558357 TERF2IPQ9NYB0 399 aa14.06□□□□□ -0.16
INO80-205ENST00000558357 FOXD1Q16676 465 aa14.06□□□□□ -0.16
INO80-205ENST00000558357 MPHOSPH9Q99550 1183 aa14.06□□□□□ -0.16
INO80-205ENST00000558357 NOL8Q76FK4 1167 aaKnown RBP14.05□□□□□ -0.16
INO80-205ENST00000558357 SLC4A10Q6U841 1118 aa14.05□□□□□ -0.16
INO80-205ENST00000558357 FOXD4L1Q9NU39 408 aa14.05□□□□□ -0.16
INO80-205ENST00000558357 CREBRFQ8IUR6 639 aa14.05□□□□□ -0.16
INO80-205ENST00000558357 TSHZ2Q9NRE2 1034 aa14.05□□□□□ -0.16
INO80-205ENST00000558357 PRM3Q9NNZ6 103 aa14.04□□□□□ -0.16
INO80-205ENST00000558357 VPS8Q8N3P4 1428 aa14.04□□□□□ -0.16
INO80-205ENST00000558357 SF3A1Q15459 793 aaKnown RBP14.04□□□□□ -0.16
INO80-205ENST00000558357 NLRP13Q86W25 1043 aa14.04□□□□□ -0.16
INO80-205ENST00000558357 CUX2O14529 1486 aa14.04□□□□□ -0.16
INO80-205ENST00000558357 CLUAP1Q96AJ1 413 aa14.04□□□□□ -0.16
INO80-205ENST00000558357 NUP155O75694 1391 aa14.04□□□□□ -0.16
INO80-205ENST00000558357 PHLDB1Q86UU1 1377 aa14.03□□□□□ -0.16
INO80-205ENST00000558357 ANKRD30AQ9BXX3 1397 aa14.02□□□□□ -0.16
INO80-205ENST00000558357 CHMP4CQ96CF2 233 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms